Non-Coding RNA Search

Cow genome map


           Conread name:
           rcbl0_019670.y1
        

               Conread position:
               1-201
               

               Cow position:
               chr13:13306236-13306033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               1-216
               

               Cow position:
               chr13:34375408-34375185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               1-221
               

               Cow position:
               chr13:1363832-1363615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               9, 114
               

               Conread position:
               1-221
               

               Cow position:
               chr13:4487686-4487903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 107
               

               Conread position:
               1-221
               

               Cow position:
               chr13:13338998-13338777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               7, 113
               

               Conread position:
               1-221
               

               Cow position:
               chr13:17613484-17613261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               7, 112
               

               Conread position:
               1-221
               

               Cow position:
               chr13:21269442-21269661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 110
               

               Conread position:
               1-222
               

               Cow position:
               chr13:42114159-42113939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               1-235
               

               Cow position:
               chr13:2192850-2192618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               1-256
               

               Cow position:
               chr13:8524484-8524728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 34
               

               Conread position:
               1-262
               

               Cow position:
               chr13:22085607-22085862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               122, 41
               

               Conread position:
               1-269
               

               Cow position:
               chr13:8652294-8652567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               1-270
               

               Cow position:
               chr13:37981606-37981869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               1-273
               

               Cow position:
               chr13:37946809-37947079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 185
               

               Conread position:
               1-289
               

               Cow position:
               chr13:52749341-52749614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               261, 74
               

               Conread position:
               1-290
               

               Cow position:
               chr13:5263152-5263426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               263, 62
               

               Conread position:
               1-290
               

               Cow position:
               chr13:18491739-18491451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 75
               

               Conread position:
               1-290
               

               Cow position:
               chr13:25817661-25817382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               1-292
               

               Cow position:
               chr13:971752-972044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               1-292
               

               Cow position:
               chr13:6974302-6974015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               1-292
               

               Cow position:
               chr13:20820698-20820984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               1-292
               

               Cow position:
               chr13:44202129-44201862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               263, 43
               

               Conread position:
               1-293
               

               Cow position:
               chr13:18166870-18166584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 41
               

               Conread position:
               1-294
               

               Cow position:
               chr13:46112107-46111822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               1-294
               

               Cow position:
               chr13:52894284-52893998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 90
               

               Conread position:
               1-299
               

               Cow position:
               chr13:9142430-9142127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 117
               

               Conread position:
               1-299
               

               Cow position:
               chr13:17004457-17004746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               1-299
               

               Cow position:
               chr13:25547449-25547736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               263, 41
               

               Conread position:
               1-305
               

               Cow position:
               chr13:61990194-61990484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               1-311
               

               Cow position:
               chr13:38277993-38278313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               1-315
               

               Cow position:
               chr13:52585880-52586206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               1-329
               

               Cow position:
               chr13:13176794-13176460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               1-338
               

               Cow position:
               chr13:51940875-51940542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               2-94
               

               Cow position:
               chr13:33054259-33054350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-109
               

               Cow position:
               chr13:15947765-15947657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               2-190
               

               Cow position:
               chr13:36346108-36345928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               2-221
               

               Cow position:
               chr13:25496147-25495926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 126
               

               Conread position:
               2-221
               

               Cow position:
               chr13:38033823-38033598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 81
               

               Conread position:
               2-223
               

               Cow position:
               chr13:9800646-9800431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               2-224
               

               Cow position:
               chr13:60329887-60329677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               2-245
               

               Cow position:
               chr13:20180554-20180308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               2-265
               

               Cow position:
               chr13:17568963-17569220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               2-268
               

               Cow position:
               chr13:25434982-25435246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               2-270
               

               Cow position:
               chr13:5758202-5758468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               2-278
               

               Cow position:
               chr13:40722566-40722840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               2-286
               

               Cow position:
               chr13:11321480-11321756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               2-294
               

               Cow position:
               chr13:20378195-20378469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 112
               

               Conread position:
               2-296
               

               Cow position:
               chr13:22115847-22115527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               2-296
               

               Cow position:
               chr13:24155684-24155363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               37, 11
               

               Conread position:
               2-296
               

               Cow position:
               chr13:55583332-55583047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               47, 42
               

               Conread position:
               2-302
               

               Cow position:
               chr13:11096312-11096026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               2-302
               

               Cow position:
               chr13:48251849-48252120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               2-318
               

               Cow position:
               chr13:23166959-23167268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 133
               

               Conread position:
               2-320
               

               Cow position:
               chr13:45726031-45725711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 11
               

               Conread position:
               2-323
               

               Cow position:
               chr13:28683502-28683184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               8, 44
               

               Conread position:
               2-327
               

               Cow position:
               chr13:56148674-56148337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 141
               

               Conread position:
               2-327
               

               Cow position:
               chr13:56160293-56160630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 141
               

               Conread position:
               2-336
               

               Cow position:
               chr13:26369663-26369333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 132
               

               Conread position:
               2-348
               

               Cow position:
               chr13:36771283-36771624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 162
               

               Conread position:
               3-161
               

               Cow position:
               chr13:37980501-37980664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               3-221
               

               Cow position:
               chr13:17338573-17338350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               4-218
               

               Cow position:
               chr13:14783251-14783043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               5-296
               

               Cow position:
               chr13:17437734-17438008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               6-185
               

               Cow position:
               chr13:30026248-30026066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               6-223
               

               Cow position:
               chr13:18973307-18973527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               6-292
               

               Cow position:
               chr13:15192758-15193033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 36
               

               Conread position:
               6-294
               

               Cow position:
               chr13:47756500-47756214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               164, 9
               

               Conread position:
               6-303
               

               Cow position:
               chr13:45353178-45352873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 228
               

               Conread position:
               7-127
               

               Cow position:
               chr13:5079093-5079211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-132
               

               Cow position:
               chr13:60690595-60690720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-150
               

               Cow position:
               chr13:37517005-37517145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               7-160
               

               Cow position:
               chr13:563012-563161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-167
               

               Cow position:
               chr13:39948287-39948442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               7-170
               

               Cow position:
               chr13:3003574-3003401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               7-170
               

               Cow position:
               chr13:6975662-6975823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               115, 35
               

               Conread position:
               7-173
               

               Cow position:
               chr13:20041831-20042001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               7-173
               

               Cow position:
               chr13:54093875-54093714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               7-183
               

               Cow position:
               chr13:28696212-28696044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               7-185
               

               Cow position:
               chr13:7790145-7789964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               129, 36
               

               Conread position:
               7-190
               

               Cow position:
               chr13:19178407-19178224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 123
               

               Conread position:
               7-196
               

               Cow position:
               chr13:14870660-14870478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               7-197
               

               Cow position:
               chr13:33517793-33517978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-208
               

               Cow position:
               chr13:2463096-2463301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 130
               

               Conread position:
               7-217
               

               Cow position:
               chr13:38698182-38697976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               7-218
               

               Cow position:
               chr13:21039467-21039675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               7-220
               

               Cow position:
               chr13:8555594-8555383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               7-221
               

               Cow position:
               chr13:2822990-2822791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               7-221
               

               Cow position:
               chr13:12200956-12201168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               94, 114
               

               Conread position:
               7-221
               

               Cow position:
               chr13:52929840-52929632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               7-224
               

               Cow position:
               chr13:61166327-61166532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               7-251
               

               Cow position:
               chr13:52879539-52879297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               7-252
               

               Cow position:
               chr13:23512498-23512264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               7-253
               

               Cow position:
               chr13:20649848-20650094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               7-253
               

               Cow position:
               chr13:25531657-25531897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               123, 35
               

               Conread position:
               7-259
               

               Cow position:
               chr13:2803599-2803354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               153, 6
               

               Conread position:
               7-260
               

               Cow position:
               chr13:15528901-15529151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               201, 35
               

               Conread position:
               7-262
               

               Cow position:
               chr13:12207174-12206932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-262
               

               Cow position:
               chr13:17745370-17745132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               114, 36
               

               Conread position:
               7-262
               

               Cow position:
               chr13:29831302-29831553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               7-262
               

               Cow position:
               chr13:60966898-60966653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               7-263
               

               Cow position:
               chr13:8374641-8374889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-265
               

               Cow position:
               chr13:49022743-49022987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               7-267
               

               Cow position:
               chr13:18989836-18989601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               7-268
               

               Cow position:
               chr13:6153651-6153906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               7-270
               

               Cow position:
               chr13:311561-311313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               251, 35
               

               Conread position:
               7-270
               

               Cow position:
               chr13:7663293-7663546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-270
               

               Cow position:
               chr13:31814002-31813750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               254, 35
               

               Conread position:
               7-270
               

               Cow position:
               chr13:54344903-54344656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 104
               

               Conread position:
               7-280
               

               Cow position:
               chr13:17821137-17821405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               7-280
               

               Cow position:
               chr13:43762300-43762034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-282
               

               Cow position:
               chr13:53566726-53566464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               257, 29
               

               Conread position:
               7-284
               

               Cow position:
               chr13:6079288-6079550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-284
               

               Cow position:
               chr13:24715375-24715102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 125
               

               Conread position:
               7-285
               

               Cow position:
               chr13:15991096-15991371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               7-285
               

               Cow position:
               chr13:24586172-24585908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-285
               

               Cow position:
               chr13:43184742-43185020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 17
               

               Conread position:
               7-286
               

               Cow position:
               chr13:8362619-8362886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 72
               

               Conread position:
               7-288
               

               Cow position:
               chr13:19188432-19188158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               7-289
               

               Cow position:
               chr13:15958754-15958470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               7-289
               

               Cow position:
               chr13:25926923-25926646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               7-290
               

               Cow position:
               chr13:13089150-13088885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr13:20784719-20784447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr13:37484143-37484422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               128, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr13:38329757-38329471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               110, 35
               

               Conread position:
               7-290
               

               Cow position:
               chr13:53574101-53573826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               257, 41
               

               Conread position:
               7-291
               

               Cow position:
               chr13:12546779-12547054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               257, 112
               

               Conread position:
               7-291
               

               Cow position:
               chr13:17021598-17021871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               7-291
               

               Cow position:
               chr13:20509863-20509588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               155, 72
               

               Conread position:
               7-291
               

               Cow position:
               chr13:37818618-37818897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               133, 102
               

               Conread position:
               7-292
               

               Cow position:
               chr13:20666258-20666533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               134, 15
               

               Conread position:
               7-292
               

               Cow position:
               chr13:27525134-27525407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               177, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr13:43480188-43479915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               241, 35
               

               Conread position:
               7-292
               

               Cow position:
               chr13:48598041-48597762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               105, 125
               

               Conread position:
               7-292
               

               Cow position:
               chr13:54583008-54582727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               7-294
               

               Cow position:
               chr13:12670317-12670600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               134, 35
               

               Conread position:
               7-294
               

               Cow position:
               chr13:15281806-15282083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 118
               

               Conread position:
               7-294
               

               Cow position:
               chr13:47186355-47186086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               214, 35
               

               Conread position:
               7-294
               

               Cow position:
               chr13:51821761-51822021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               257, 17
               

               Conread position:
               7-294
               

               Cow position:
               chr13:52055468-52055741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 39
               

               Conread position:
               7-294
               

               Cow position:
               chr13:60974214-60973931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 172
               

               Conread position:
               7-295
               

               Cow position:
               chr13:26480082-26480354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               7-296
               

               Cow position:
               chr13:12448861-12449137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 124
               

               Conread position:
               7-296
               

               Cow position:
               chr13:14016438-14016710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               235, 102
               

               Conread position:
               7-296
               

               Cow position:
               chr13:20174881-20174591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               33, 117
               

               Conread position:
               7-296
               

               Cow position:
               chr13:20360401-20360128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               257, 29
               

               Conread position:
               7-296
               

               Cow position:
               chr13:21275986-21275708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 58
               

               Conread position:
               7-296
               

               Cow position:
               chr13:24230343-24230062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               7-296
               

               Cow position:
               chr13:28552727-28552439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               7-296
               

               Cow position:
               chr13:32283255-32282977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-296
               

               Cow position:
               chr13:37592807-37593098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 118
               

               Conread position:
               7-296
               

               Cow position:
               chr13:60508988-60509271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               7-298
               

               Cow position:
               chr13:10988944-10989221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               7-299
               

               Cow position:
               chr13:26698366-26698651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               7-300
               

               Cow position:
               chr13:2404870-2404607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-300
               

               Cow position:
               chr13:15869252-15868959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               175, 36
               

               Conread position:
               7-300
               

               Cow position:
               chr13:17800203-17799920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               7-302
               

               Cow position:
               chr13:23960682-23960959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-303
               

               Cow position:
               chr13:9900280-9900001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               7-303
               

               Cow position:
               chr13:57475285-57475563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               121, 94
               

               Conread position:
               7-308
               

               Cow position:
               chr13:33352236-33352512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               211, 17
               

               Conread position:
               7-309
               

               Cow position:
               chr13:15110451-15110151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 215
               

               Conread position:
               7-310
               

               Cow position:
               chr13:18696973-18696676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               7-310
               

               Cow position:
               chr13:20683990-20684296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               7-310
               

               Cow position:
               chr13:45023081-45023370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               7-312
               

               Cow position:
               chr13:4464134-4463857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               121, 50
               

               Conread position:
               7-312
               

               Cow position:
               chr13:37640717-37640421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               7-316
               

               Cow position:
               chr13:4420478-4420159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 127
               

               Conread position:
               7-316
               

               Cow position:
               chr13:14771588-14771281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 106
               

               Conread position:
               7-316
               

               Cow position:
               chr13:17439639-17439939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-316
               

               Cow position:
               chr13:40943375-40943071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-319
               

               Cow position:
               chr13:18172469-18172162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               7-323
               

               Cow position:
               chr13:2414161-2413851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               7-325
               

               Cow position:
               chr13:10928863-10929169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               257, 13
               

               Conread position:
               7-326
               

               Cow position:
               chr13:11061118-11060805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 116
               

               Conread position:
               7-330
               

               Cow position:
               chr13:21283579-21283889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 29
               

               Conread position:
               7-330
               

               Cow position:
               chr13:39368086-39367772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               7-339
               

               Cow position:
               chr13:49824154-49823835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               117, 63
               

               Conread position:
               7-340
               

               Cow position:
               chr13:46181920-46181605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               7-343
               

               Cow position:
               chr13:51115897-51116219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 35
               

               Conread position:
               8-166
               

               Cow position:
               chr13:6113169-6113328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               8-175
               

               Cow position:
               chr13:13809429-13809596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               8-189
               

               Cow position:
               chr13:41154902-41155080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-215
               

               Cow position:
               chr13:53536173-53536381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 37
               

               Conread position:
               8-233
               

               Cow position:
               chr13:25381092-25380869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               8-241
               

               Cow position:
               chr13:11954980-11955212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               8-259
               

               Cow position:
               chr13:22075802-22075558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               8-260
               

               Cow position:
               chr13:12745801-12745560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               137, 34
               

               Conread position:
               8-262
               

               Cow position:
               chr13:57494058-57494305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               8-268
               

               Cow position:
               chr13:9593638-9593383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 34
               

               Conread position:
               8-269
               

               Cow position:
               chr13:12282964-12282703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               117, 34
               

               Conread position:
               8-270
               

               Cow position:
               chr13:38012487-38012207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               8-278
               

               Cow position:
               chr13:20839693-20839433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               254, 28
               

               Conread position:
               8-288
               

               Cow position:
               chr13:24754011-24753746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 81
               

               Conread position:
               8-289
               

               Cow position:
               chr13:9246848-9246590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               8-292
               

               Cow position:
               chr13:11260399-11260130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 62
               

               Conread position:
               8-296
               

               Cow position:
               chr13:12875842-12876123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 66
               

               Conread position:
               8-296
               

               Cow position:
               chr13:15872578-15872290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 144
               

               Conread position:
               8-296
               

               Cow position:
               chr13:18929661-18929378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               8-296
               

               Cow position:
               chr13:37521607-37521893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               8-306
               

               Cow position:
               chr13:6389510-6389235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               8-308
               

               Cow position:
               chr13:4664737-4665018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 5
               

               Conread position:
               8-324
               

               Cow position:
               chr13:16014945-16014633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               8-330
               

               Cow position:
               chr13:17622411-17622110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 34
               

               Conread position:
               9-170
               

               Cow position:
               chr13:37977345-37977511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               9-187
               

               Cow position:
               chr13:5091536-5091714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               131, 114
               

               Conread position:
               9-209
               

               Cow position:
               chr13:21155364-21155567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               178, 33
               

               Conread position:
               9-218
               

               Cow position:
               chr13:6931044-6930839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               9-221
               

               Cow position:
               chr13:6849059-6848847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               9-221
               

               Cow position:
               chr13:13954259-13954472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               9-237
               

               Cow position:
               chr13:34941524-34941741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               157, 41
               

               Conread position:
               9-247
               

               Cow position:
               chr13:18243992-18243761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               9-259
               

               Cow position:
               chr13:20466155-20466398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               9-262
               

               Cow position:
               chr13:6060881-6061124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               9-262
               

               Cow position:
               chr13:10845722-10845488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               9-264
               

               Cow position:
               chr13:49805100-49804859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               9-265
               

               Cow position:
               chr13:34263240-34263489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-284
               

               Cow position:
               chr13:21241964-21242223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               251, 33
               

               Conread position:
               9-285
               

               Cow position:
               chr13:20563125-20562853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 107
               

               Conread position:
               9-290
               

               Cow position:
               chr13:152083-151818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-290
               

               Cow position:
               chr13:15195075-15195348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               9-290
               

               Cow position:
               chr13:41806904-41806625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-291
               

               Cow position:
               chr13:49520693-49520969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 33
               

               Conread position:
               9-292
               

               Cow position:
               chr13:13320913-13320650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-294
               

               Cow position:
               chr13:6441971-6442255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 173
               

               Conread position:
               9-294
               

               Cow position:
               chr13:25579058-25579339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 62
               

               Conread position:
               9-294
               

               Cow position:
               chr13:55674080-55674357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               255, 33
               

               Conread position:
               9-296
               

               Cow position:
               chr13:9587458-9587732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               9-296
               

               Cow position:
               chr13:17158746-17159029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               165, 36
               

               Conread position:
               9-302
               

               Cow position:
               chr13:15349133-15349402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               224, 33
               

               Conread position:
               9-304
               

               Cow position:
               chr13:30798852-30798563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               106, 121
               

               Conread position:
               9-308
               

               Cow position:
               chr13:3315549-3315836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               9-336
               

               Cow position:
               chr13:547614-547308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               9-337
               

               Cow position:
               chr13:11591875-11591553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 70
               

               Conread position:
               10-223
               

               Cow position:
               chr13:44626500-44626286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               31, 72
               

               Conread position:
               10-277
               

               Cow position:
               chr13:23270083-23270337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               252, 91
               

               Conread position:
               10-296
               

               Cow position:
               chr13:20088575-20088866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               104, 217
               

               Conread position:
               10-297
               

               Cow position:
               chr13:1569051-1568780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               254, 32
               

               Conread position:
               10-300
               

               Cow position:
               chr13:61976837-61977105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               254, 32
               

               Conread position:
               12-289
               

               Cow position:
               chr13:5910770-5911039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               13-146
               

               Cow position:
               chr13:21904791-21904659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               13-159
               

               Cow position:
               chr13:25249029-25249175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               13-193
               

               Cow position:
               chr13:5752299-5752480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               52, 121
               

               Conread position:
               13-204
               

               Cow position:
               chr13:10098866-10099050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               13-208
               

               Cow position:
               chr13:20128790-20128600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               13-214
               

               Cow position:
               chr13:41253747-41253549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               13-254
               

               Cow position:
               chr13:8201361-8201591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               158, 30
               

               Conread position:
               13-283
               

               Cow position:
               chr13:9643761-9644028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 70
               

               Conread position:
               13-285
               

               Cow position:
               chr13:15974739-15974478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               30, 108
               

               Conread position:
               13-289
               

               Cow position:
               chr13:4552928-4552675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               13-294
               

               Cow position:
               chr13:15041347-15041622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               13-299
               

               Cow position:
               chr13:43919134-43919414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               13-300
               

               Cow position:
               chr13:9265707-9265981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               13-300
               

               Cow position:
               chr13:16024716-16024419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               194, 119
               

               Conread position:
               13-313
               

               Cow position:
               chr13:52284934-52284649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 59
               

               Conread position:
               13-333
               

               Cow position:
               chr13:7076382-7076071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 31
               

               Conread position:
               14-221
               

               Cow position:
               chr13:52227976-52228179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 97
               

               Conread position:
               14-233
               

               Cow position:
               chr13:47188569-47188344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 140
               

               Conread position:
               14-312
               

               Cow position:
               chr13:37381930-37381634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               15-135
               

               Cow position:
               chr13:25261687-25261809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               15-212
               

               Cow position:
               chr13:53070047-53070230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               15-303
               

               Cow position:
               chr13:23856335-23856053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               249, 28
               

               Conread position:
               16-295
               

               Cow position:
               chr13:20893515-20893790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               157, 54
               

               Conread position:
               17-218
               

               Cow position:
               chr13:27240826-27240629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               18-215
               

               Cow position:
               chr13:29814666-29814466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 183
               

               Conread position:
               18-218
               

               Cow position:
               chr13:46698268-46698463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr13:9846334-9846541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 105
               

               Conread position:
               18-221
               

               Cow position:
               chr13:27493730-27493936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               156, 89
               

               Conread position:
               18-221
               

               Cow position:
               chr13:59687761-59687957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               18-295
               

               Cow position:
               chr13:38562062-38561793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               77, 61
               

               Conread position:
               19-121
               

               Cow position:
               chr13:4514580-4514478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-218
               

               Cow position:
               chr13:46324666-46324865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               19-220
               

               Cow position:
               chr13:45604303-45604495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               199, 38
               

               Conread position:
               19-223
               

               Cow position:
               chr13:42860455-42860651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               19-246
               

               Cow position:
               chr13:50713321-50713110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               19-262
               

               Cow position:
               chr13:15194613-15194851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               19-293
               

               Cow position:
               chr13:18058127-18058395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               121, 23
               

               Conread position:
               19-296
               

               Cow position:
               chr13:18995247-18994975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               19-296
               

               Cow position:
               chr13:19279209-19278945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               122, 7
               

               Conread position:
               19-297
               

               Cow position:
               chr13:14576325-14576061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 23
               

               Conread position:
               20-221
               

               Cow position:
               chr13:27550857-27550660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               20-263
               

               Cow position:
               chr13:15884902-15885139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               20-284
               

               Cow position:
               chr13:9974955-9975215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 100
               

               Conread position:
               20-288
               

               Cow position:
               chr13:34261352-34261088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               20-293
               

               Cow position:
               chr13:5060863-5060590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               204, 90
               

               Conread position:
               20-296
               

               Cow position:
               chr13:21135782-21136056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               201, 22
               

               Conread position:
               21-154
               

               Cow position:
               chr13:55947891-55947761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               22, 102
               

               Conread position:
               21-183
               

               Cow position:
               chr13:61162766-61162602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 105
               

               Conread position:
               21-296
               

               Cow position:
               chr13:44278469-44278197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               142, 69
               

               Conread position:
               23-322
               

               Cow position:
               chr13:8355314-8355031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               24-217
               

               Cow position:
               chr13:20357779-20357968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               166, 86
               

               Conread position:
               24-262
               

               Cow position:
               chr13:56678129-56677899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               24-270
               

               Cow position:
               chr13:62247242-62247012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               138, 46
               

               Conread position:
               24-286
               

               Cow position:
               chr13:45073812-45074049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               115, 18
               

               Conread position:
               24-304
               

               Cow position:
               chr13:51901702-51901425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               24-329
               

               Cow position:
               chr13:13765899-13765604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               24-343
               

               Cow position:
               chr13:1042851-1043158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               25-218
               

               Cow position:
               chr13:49507736-49507926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               25-278
               

               Cow position:
               chr13:47322291-47322541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               26-181
               

               Cow position:
               chr13:16711742-16711588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 100
               

               Conread position:
               27-292
               

               Cow position:
               chr13:19320646-19320383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               27-296
               

               Cow position:
               chr13:49476199-49475924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               16, 142
               

               Conread position:
               28-197
               

               Cow position:
               chr13:14967105-14967273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 83
               

               Conread position:
               29-294
               

               Cow position:
               chr13:16714150-16714413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 103
               

               Conread position:
               30-173
               

               Cow position:
               chr13:322674-322816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               30-251
               

               Cow position:
               chr13:60389379-60389593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               30-262
               

               Cow position:
               chr13:19240544-19240315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               134, 99
               

               Conread position:
               30-289
               

               Cow position:
               chr13:16038183-16038429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               31-273
               

               Cow position:
               chr13:49457781-49457556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               31-328
               

               Cow position:
               chr13:55728006-55727719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 12
               

               Conread position:
               33-327
               

               Cow position:
               chr13:43829345-43829063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               227, 22
               

               Conread position:
               35-295
               

               Cow position:
               chr13:4158767-4158510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               106, 76
               

               Conread position:
               35-296
               

               Cow position:
               chr13:620157-620395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               35-296
               

               Cow position:
               chr13:46516164-46515909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               68, 76
               

               Conread position:
               35-296
               

               Cow position:
               chr13:54128489-54128746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 99
               

               Conread position:
               35-297
               

               Cow position:
               chr13:15621918-15621659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               92, 142
               

               Conread position:
               36-270
               

               Cow position:
               chr13:12614358-12614128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               36-270
               

               Cow position:
               chr13:46329501-46329731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               228, 103
               

               Conread position:
               36-272
               

               Cow position:
               chr13:7265022-7265246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               36-296
               

               Cow position:
               chr13:8667716-8667468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               36-296
               

               Cow position:
               chr13:10924810-10925070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 192
               

               Conread position:
               36-300
               

               Cow position:
               chr13:20271127-20271379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               206, 9
               

               Conread position:
               37-283
               

               Cow position:
               chr13:46736314-46736077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               227, 85
               

               Conread position:
               38-264
               

               Cow position:
               chr13:6540207-6540434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               38-289
               

               Cow position:
               chr13:3989304-3989060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               88, 72
               

               Conread position:
               38-292
               

               Cow position:
               chr13:13196342-13196092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               79, 71
               

               Conread position:
               38-295
               

               Cow position:
               chr13:15659377-15659129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               39-251
               

               Cow position:
               chr13:15446142-15445925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               40-216
               

               Cow position:
               chr13:16203767-16203595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               41-262
               

               Cow position:
               chr13:31344131-31344335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 40
               

               Conread position:
               42-296
               

               Cow position:
               chr13:25978094-25978341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               214, 77
               

               Conread position:
               45-288
               

               Cow position:
               chr13:56034765-56035002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               219, 87
               

               Conread position:
               45-297
               

               Cow position:
               chr13:50750960-50751206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               216, 64
               

               Conread position:
               47-340
               

               Cow position:
               chr13:3211643-3211350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 62
               

               Conread position:
               48-247
               

               Cow position:
               chr13:16187807-16187997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               48-296
               

               Cow position:
               chr13:20137915-20137670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               134, 62
               

               Conread position:
               48-304
               

               Cow position:
               chr13:53330362-53330113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               171, 72
               

               Conread position:
               49-286
               

               Cow position:
               chr13:17110309-17110086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               215, 19
               

               Conread position:
               49-292
               

               Cow position:
               chr13:15964408-15964151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 71
               

               Conread position:
               51-291
               

               Cow position:
               chr13:10040447-10040705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 157
               

               Conread position:
               51-304
               

               Cow position:
               chr13:42229407-42229154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               52-318
               

               Cow position:
               chr13:185618-185358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               212, 52
               

               Conread position:
               54-223
               

               Cow position:
               chr13:26120278-26120441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               57-312
               

               Cow position:
               chr13:17563816-17563573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               61-305
               

               Cow position:
               chr13:38872874-38873104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               202, 61
               

               Conread position:
               65-286
               

               Cow position:
               chr13:827316-827105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               199, 55
               

               Conread position:
               68-321
               

               Cow position:
               chr13:5006063-5005827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               70-292
               

               Cow position:
               chr13:37503513-37503732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               57, 7
               

               Conread position:
               74-296
               

               Cow position:
               chr13:12925837-12925628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               188, 7
               

               Conread position:
               75-293
               

               Cow position:
               chr13:62008176-62007959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               78-294
               

               Cow position:
               chr13:1147088-1147298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               80-262
               

               Cow position:
               chr13:18181714-18181891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               80-270
               

               Cow position:
               chr13:25428169-25428348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               184, 37
               

               Conread position:
               80-295
               

               Cow position:
               chr13:17838008-17837801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               184, 52
               

               Conread position:
               82-289
               

               Cow position:
               chr13:24110543-24110336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 144
               

               Conread position:
               84-294
               

               Cow position:
               chr13:17350408-17350207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               177, 108
               

               Conread position:
               87-284
               

               Cow position:
               chr13:16020904-16020712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               177, 45
               

               Conread position:
               94-293
               

               Cow position:
               chr13:20534939-20534749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               101-291
               

               Cow position:
               chr13:584833-585016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               112-330
               

               Cow position:
               chr13:51813906-51814115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               152, 64
               

               Conread position:
               118-297
               

               Cow position:
               chr13:21980952-21981124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               123-303
               

               Cow position:
               chr13:37775187-37775364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               123-310
               

               Cow position:
               chr13:37621342-37621522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               141, 23
               

               Conread position:
               123-311
               

               Cow position:
               chr13:40154709-40154894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               124-292
               

               Cow position:
               chr13:8699719-8699884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 99
               

               Conread position:
               125-301
               

               Cow position:
               chr13:6926535-6926362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               126-284
               

               Cow position:
               chr13:8233013-8232862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               138, 12
               

               Conread position:
               126-314
               

               Cow position:
               chr13:47243537-47243722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 52
               

               Conread position:
               128-285
               

               Cow position:
               chr13:52536580-52536422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               131-288
               

               Cow position:
               chr13:10522944-10522794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               133-288
               

               Cow position:
               chr13:6980928-6980778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               133-290
               

               Cow position:
               chr13:7046879-7046725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               133-294
               

               Cow position:
               chr13:18340542-18340384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               131, 90
               

               Conread position:
               133-301
               

               Cow position:
               chr13:19750724-19750559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 83
               

               Conread position:
               137-295
               

               Cow position:
               chr13:17813476-17813321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 86
               

               Conread position:
               138-293
               

               Cow position:
               chr13:7104658-7104507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               126, 85
               

               Conread position:
               138-296
               

               Cow position:
               chr13:16908221-16908066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               126, 85
               

               Conread position:
               138-298
               

               Cow position:
               chr13:6486247-6486400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               141-304
               

               Cow position:
               chr13:6183419-6183579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               123, 82
               

               Conread position:
               143-337
               

               Cow position:
               chr13:21295074-21294883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               121, 83
               

               Conread position:
               148-294
               

               Cow position:
               chr13:28439403-28439260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 75
               

               Conread position:
               153-292
               

               Cow position:
               chr13:50622823-50622958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               154-292
               

               Cow position:
               chr13:43787849-43787985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               154-303
               

               Cow position:
               chr13:43839688-43839835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               155-307
               

               Cow position:
               chr13:5079374-5079525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               156-330
               

               Cow position:
               chr13:1075053-1075225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               157-303
               

               Cow position:
               chr13:47227374-47227517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               159-296
               

               Cow position:
               chr13:3153733-3153600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               166-314
               

               Cow position:
               chr13:20531498-20531643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 57
               

               Conread position:
               167-330
               

               Cow position:
               chr13:32363205-32363366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               170-316
               

               Cow position:
               chr13:21193066-21192923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               173-329
               

               Cow position:
               chr13:20826754-20826909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               92, 50
               

               Conread position:
               178-300
               

               Cow position:
               chr13:47644028-47643905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               178-301
               

               Cow position:
               chr13:28652705-28652585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               178-330
               

               Cow position:
               chr13:15808730-15808581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               179-303
               

               Cow position:
               chr13:38702666-38702786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               180-325
               

               Cow position:
               chr13:41616086-41616226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               185-314
               

               Cow position:
               chr13:19467381-19467506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               189-328
               

               Cow position:
               chr13:26365858-26365722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               193-336
               

               Cow position:
               chr13:6267201-6267061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               71, 30
               

               Conread position:
               226-330
               

               Cow position:
               chr13:15105418-15105313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               226-336
               

               Cow position:
               chr13:37021076-37021187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-201
Cow position:	chr13:13306236-13306033 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	148
Alignm E-value:	6e-28
Alignm gaps (pig, cow):	7, 124
Conread position:	1-216
Cow position:	chr13:34375408-34375185 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	161
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	7, 122
Conread position:	1-221
Cow position:	chr13:1363832-1363615 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	159
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	9, 114
Conread position:	1-222
Cow position:	chr13:42114159-42113939 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	167
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	7, 114
Conread position:	1-235
Cow position:	chr13:2192850-2192618 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	170
Alignm E-value:	7e-29
Alignm gaps (pig, cow):	13, 30
Conread position:	1-256
Cow position:	chr13:8524484-8524728 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	197
Alignm E-value:	0
Alignm gaps (pig, cow):	118, 34
Conread position:	1-262
Cow position:	chr13:22085607-22085862 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	193
Alignm E-value:	8.00001e-41
Alignm gaps (pig, cow):	122, 41
Conread position:	1-269
Cow position:	chr13:8652294-8652567 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 35
Conread position:	1-270
Cow position:	chr13:37981606-37981869 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	210
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 59
Conread position:	1-273
Cow position:	chr13:37946809-37947079 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	195
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	9, 185
Conread position:	1-289
Cow position:	chr13:52749341-52749614 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	218
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	261, 74
Conread position:	1-290
Cow position:	chr13:5263152-5263426 (view UCSC Genome Browser custom track)
Alignm length:	291
Alignm identity:	205
Alignm E-value:	5e-36
Alignm gaps (pig, cow):	263, 62
Conread position:	1-292
Cow position:	chr13:971752-972044 (view UCSC Genome Browser custom track)
Alignm length:	299
Alignm identity:	205
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	14, 45
Conread position:	1-293
Cow position:	chr13:18166870-18166584 (view UCSC Genome Browser custom track)
Alignm length:	294
Alignm identity:	234
Alignm E-value:	0
Alignm gaps (pig, cow):	263, 41
Conread position:	1-294
Cow position:	chr13:46112107-46111822 (view UCSC Genome Browser custom track)
Alignm length:	301
Alignm identity:	221
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	61, 39
Conread position:	1-299
Cow position:	chr13:9142430-9142127 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	231
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 117
Conread position:	1-305
Cow position:	chr13:61990194-61990484 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	228
Alignm E-value:	3.00004e-41
Alignm gaps (pig, cow):	9, 127
Conread position:	1-311
Cow position:	chr13:38277993-38278313 (view UCSC Genome Browser custom track)
Alignm length:	330
Alignm identity:	240
Alignm E-value:	9.94922e-44
Alignm gaps (pig, cow):	9, 46
Conread position:	1-315
Cow position:	chr13:52585880-52586206 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	243
Alignm E-value:	0
Alignm gaps (pig, cow):	12, 52
Conread position:	1-329
Cow position:	chr13:13176794-13176460 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	250
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 47