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Cow genome map

           
Conread name:
           
rcbl0_019670.y1
        

               
Conread position:
               
1-160
               

               
Cow position:
               
chr16:14028780-14028625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr16:23810761-23810916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr16:47620229-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr16:39704995-39704824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr16:16280597-16280430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr16:33229918-33230100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:4712746-4712929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 68
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr16:7496046-7496231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr16:27249257-27249438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr16:7544393-7544591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 138
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr16:26342117-26342313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr16:35343625-35343412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr16:18074414-18074200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 16
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr16:38191319-38191535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 109
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr16:56787931-56787714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr16:15504675-15504455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:4981536-4981312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:33753280-33753495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:44744291-44744068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr16:13233100-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr16:53048402-53048628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr16:8315336-8315081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
261, 43
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr16:27723061-27723345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:28396252-28395957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
39, 238
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr16:41530446-41530173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr16:3614595-3614870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
256, 40
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr16:46552657-46552923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:820096-820385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 122
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:26676841-26676555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:42078993-42078716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr16:48145561-48145272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:21450692-21450979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:29037752-29038046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 187
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr16:42092537-42092247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 37
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr16:25170239-25170527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:42752701-42752979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr16:52636533-52636251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:4857249-4856965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:10039993-10039710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:28922633-28922910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
261, 119
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:13195493-13195199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
263, 41
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr16:29380101-29380390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr16:26373106-26372808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr16:4059204-4059500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
263, 18
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr16:38905381-38905090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr16:8933578-8933279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:13689513-13689818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr16:22842208-22841910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 9
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr16:35188102-35188409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 128
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr16:24825919-24826233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr16:53627580-53627246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr16:50688370-50688717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr16:44676722-44676908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr16:13792808-13792615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr16:21905015-21905215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr16:11568270-11568064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 79
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr16:21369332-21369550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
132, 162
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr16:28692870-28692655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr16:39514226-39513988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
139, 40
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr16:53891933-53891694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr16:36203768-36203517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr16:52835034-52834786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr16:52889559-52889309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr16:42340043-42340307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr16:46627986-46627726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 42
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr16:56831888-56831631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr16:8323134-8322860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr16:35623392-35623119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
262, 42
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr16:48087029-48086740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr16:14685540-14685257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 40
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr16:591963-591670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr16:23058585-23058298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr16:47662559-47662865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 236
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr16:49125679-49125389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 40
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr16:39646398-39646691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr16:16402475-16402187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr16:16548459-16548757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr16:52133666-52133367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr16:29608364-29608661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr16:13447112-13447424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr16:17626779-17627084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr16:11105401-11105713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr16:54083884-54084219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 121
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr16:7498906-7499221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr16:22804744-22804410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
2-353
               

               
Cow position:
               
chr16:17142785-17143123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 120
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr16:33130308-33130526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 27
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr16:46433477-46433191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
201, 31
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr16:5415912-5415614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:29095790-29096121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
5-212
               

               
Cow position:
               
chr16:30515740-30515533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr16:8812230-8811972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-122
               

               
Cow position:
               
chr16:33752049-33752165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr16:30705963-30706136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr16:4972168-4971906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
213, 92
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr16:49229918-49229636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr16:31558745-31559038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 223
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr16:49169532-49169244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
7-162
               

               
Cow position:
               
chr16:30209609-30209756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
7-167
               

               
Cow position:
               
chr16:31159719-31159561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
7-170
               

               
Cow position:
               
chr16:4103304-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-170
               

               
Cow position:
               
chr16:4503134-4503296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
7-172
               

               
Cow position:
               
chr16:44973349-44973510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr16:23187128-23187304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr16:29067022-29067178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr16:30311256-30311089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
114, 103
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr16:39417263-39417103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr16:42253714-42253541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-180
               

               
Cow position:
               
chr16:22868321-22868154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
7-185
               

               
Cow position:
               
chr16:56912863-56912684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 116
               

               
Conread position:
               
7-192
               

               
Cow position:
               
chr16:17665490-17665669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr16:41608465-41608656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
7-205
               

               
Cow position:
               
chr16:53595666-53595476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr16:4144918-4145114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr16:11619604-11619802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr16:14360958-14361162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr16:9136030-9136230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
116, 158
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr16:24672503-24672296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
7-218
               

               
Cow position:
               
chr16:37236783-37236572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
99, 116
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr16:600803-601010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr16:3321835-3322045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
158, 100
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr16:35195751-35195548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr16:37380121-37380335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr16:16265245-16265019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
156, 62
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr16:30143355-30143118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
7-253
               

               
Cow position:
               
chr16:32327506-32327751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr16:50521332-50521570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr16:43661299-43661552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr16:12320076-12320323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr16:32132379-32132609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr16:42345749-42345509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-265
               

               
Cow position:
               
chr16:4902443-4902693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr16:5636443-5636693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr16:10148131-10148393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr16:17982288-17982032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr16:3246352-3246089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr16:20476390-20476653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr16:39165098-39165356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 63
               

               
Conread position:
               
7-279
               

               
Cow position:
               
chr16:51246802-51247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr16:8025991-8025734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
257, 27
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr16:29655183-29655446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
254, 83
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr16:48494699-48494432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
257, 36
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr16:17288795-17289072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
7-286
               

               
Cow position:
               
chr16:42734159-42733884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr16:5256854-5257123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr16:19003662-19003403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
257, 37
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr16:30037137-30036863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr16:47242814-47243090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
167, 89
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr16:49126331-49126058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
251, 33
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr16:11775196-11774915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr16:25380642-25380365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:6016541-6016250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 222
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:7504942-7505215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
257, 37
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:11806530-11806803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:22380501-22380223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:29712274-29712550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr16:52275276-52275001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr16:25839473-25839752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr16:35758066-35758333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
254, 38
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr16:37452764-37452482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
7-291
               

               
Cow position:
               
chr16:38243808-38243531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 115
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:45677841-45678112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:45813847-45813566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:48340841-48340562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:51113023-51112747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 123
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:51500788-51501062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr16:51598751-51598480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr16:8076654-8076368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 228
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr16:10772987-10773256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr16:14242226-14242501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:4910677-4910390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:7010924-7011206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:8522541-8522255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:15762305-15762019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
113, 103
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:29557773-29557490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:33645869-33646149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
136, 36
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:42200747-42201037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 130
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr16:50289003-50289285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr16:9985532-9985257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
257, 36
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr16:14568627-14568354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr16:40562085-40562367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:2223549-2223260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 219
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:7152319-7152036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:8066031-8065751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
257, 91
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:18757986-18757702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 156
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:20205310-20205598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 218
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:24702706-24702987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 103
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:42399045-42398755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr16:43308711-43308426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr16:53086475-53086202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr16:7702389-7702658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
255, 63
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr16:9933013-9933292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
271, 55
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr16:8193302-8193593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr16:10592289-10592577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
243, 35
               

               
Conread position:
               
7-302
               

               
Cow position:
               
chr16:17745689-17745979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr16:4192565-4192290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
257, 63
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr16:31348913-31348622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
7-303
               

               
Cow position:
               
chr16:34153720-34153427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr16:5363750-5364046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr16:43275876-43276164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
7-307
               

               
Cow position:
               
chr16:41697233-41696944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr16:17945376-17945674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr16:11790871-11791162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr16:18354098-18353805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
7-314
               

               
Cow position:
               
chr16:47643271-47643567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
243, 17
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr16:25386835-25387132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr16:9973644-9973341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
128, 36
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr16:14758586-14758891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
7-320
               

               
Cow position:
               
chr16:5836437-5836745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr16:5726776-5727093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 201
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr16:16096590-16096900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 183
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr16:20025301-20025608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr16:4399580-4399904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
7-328
               

               
Cow position:
               
chr16:11102970-11102655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr16:35296927-35297254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr16:43105659-43105346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 94
               

               
Conread position:
               
7-342
               

               
Cow position:
               
chr16:12273922-12274248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 116
               

               
Conread position:
               
8-173
               

               
Cow position:
               
chr16:26501010-26501175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chr16:13791372-13791548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
8-193
               

               
Cow position:
               
chr16:4372639-4372456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr16:10651035-10650826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr16:23738034-23738289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr16:27262095-27261843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr16:38119589-38119341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
256, 52
               

               
Conread position:
               
8-275
               

               
Cow position:
               
chr16:5845525-5845785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
116, 126
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr16:29766191-29766452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr16:14754467-14754194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
8-288
               

               
Cow position:
               
chr16:16236273-16235996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr16:42242261-42241989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 122
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr16:12361121-12360844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
8-292
               

               
Cow position:
               
chr16:20634023-20633744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
8-294
               

               
Cow position:
               
chr16:11957729-11957444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 218
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr16:5896274-5896554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
8-298
               

               
Cow position:
               
chr16:43801064-43800780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 141
               

               
Conread position:
               
8-304
               

               
Cow position:
               
chr16:15960436-15960145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 36
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr16:56875794-56875512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
8-317
               

               
Cow position:
               
chr16:54341843-54342144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr16:6319053-6319369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
8-326
               

               
Cow position:
               
chr16:22009016-22009304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr16:41689551-41689862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr16:5741099-5741426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
8-336
               

               
Cow position:
               
chr16:12633739-12634065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr16:12060272-12060603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr16:41691084-41690908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr16:16552418-16552626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr16:31978331-31978121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr16:6887589-6887385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 33
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr16:26610494-26610704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr16:37116927-37117139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr16:4699124-4698888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr16:51070069-51069813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr16:22808696-22808450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
253, 35
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr16:43505942-43505702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
255, 35
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr16:48398396-48398145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr16:48493035-48493289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
253, 33
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr16:14974676-14974433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
9-289
               

               
Cow position:
               
chr16:23472603-23472877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr16:1549017-1548747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
255, 32
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr16:56082504-56082228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 20
               

               
Conread position:
               
9-298
               

               
Cow position:
               
chr16:47820430-47820707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
255, 32
               

               
Conread position:
               
9-300
               

               
Cow position:
               
chr16:53813803-53813512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chr16:15808831-15809129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr16:13611595-13611303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
9-311
               

               
Cow position:
               
chr16:37669880-37669584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
255, 33
               

               
Conread position:
               
9-339
               

               
Cow position:
               
chr16:53509130-53508805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr16:814752-814903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr16:30096273-30096031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr16:39474280-39474047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr16:19756938-19756646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr16:19643746-19644021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
10-294
               

               
Cow position:
               
chr16:13307006-13306737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
253, 32
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr16:7665492-7665774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr16:8840750-8841027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
10-296
               

               
Cow position:
               
chr16:42633898-42633607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
10-320
               

               
Cow position:
               
chr16:42217829-42217523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
208, 95
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr16:45535037-45535357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
190, 91
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr16:49404291-49404108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr16:53830725-53830481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
245, 30
               

               
Conread position:
               
13-279
               

               
Cow position:
               
chr16:51869500-51869759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr16:18205821-18206089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 30
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr16:48095901-48095635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
251, 29
               

               
Conread position:
               
13-290
               

               
Cow position:
               
chr16:49336088-49336354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
13-292
               

               
Cow position:
               
chr16:38708970-38708702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr16:54225646-54225383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
246, 29
               

               
Conread position:
               
13-298
               

               
Cow position:
               
chr16:42444016-42444294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
13-332
               

               
Cow position:
               
chr16:7549828-7550139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
14-212
               

               
Cow position:
               
chr16:47245445-47245645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
14-270
               

               
Cow position:
               
chr16:52855163-52854911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
194, 102
               

               
Conread position:
               
14-284
               

               
Cow position:
               
chr16:48385539-48385279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 30
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr16:8448783-8448518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr16:45348247-45348524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
15-146
               

               
Cow position:
               
chr16:8621094-8621224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr16:14699781-14699977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
15-284
               

               
Cow position:
               
chr16:10504695-10504951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
249, 27
               

               
Conread position:
               
15-289
               

               
Cow position:
               
chr16:50453624-50453898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
209, 95
               

               
Conread position:
               
15-315
               

               
Cow position:
               
chr16:50282563-50282276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
17-328
               

               
Cow position:
               
chr16:30136030-30135740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 115
               

               
Conread position:
               
18-263
               

               
Cow position:
               
chr16:571048-570817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
18-280
               

               
Cow position:
               
chr16:54710168-54709921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
246, 28
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr16:33482303-33482577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr16:44210700-44210425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 209
               

               
Conread position:
               
19-158
               

               
Cow position:
               
chr16:9790765-9790629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
19-205
               

               
Cow position:
               
chr16:26703052-26702865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 57
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr16:19047572-19047369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
19-307
               

               
Cow position:
               
chr16:13698378-13698662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
100, 114
               

               
Conread position:
               
20-256
               

               
Cow position:
               
chr16:11085512-11085278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr16:36121113-36120881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
20-353
               

               
Cow position:
               
chr16:33267583-33267912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 92
               

               
Conread position:
               
21-170
               

               
Cow position:
               
chr16:26068800-26068946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr16:30369221-30369412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr16:31117746-31117482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
243, 21
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr16:46655156-46655334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
24-221
               

               
Cow position:
               
chr16:56590380-56590570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr16:45554314-45554566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
24-282
               

               
Cow position:
               
chr16:51696951-51697208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
24-288
               

               
Cow position:
               
chr16:54664930-54664672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
24-292
               

               
Cow position:
               
chr16:8959188-8958921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr16:8737936-8738201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr16:23955955-23955693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr16:54734115-54734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr16:27019946-27020136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
193, 84
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr16:39683236-39682965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
27-220
               

               
Cow position:
               
chr16:2309832-2310028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
27-292
               

               
Cow position:
               
chr16:11082883-11083130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 15
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr16:24249958-24249778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
28-297
               

               
Cow position:
               
chr16:47854818-47855076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 61
               

               
Conread position:
               
30-290
               

               
Cow position:
               
chr16:22984634-22984884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
234, 80
               

               
Conread position:
               
30-307
               

               
Cow position:
               
chr16:10945555-10945294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
30-312
               

               
Cow position:
               
chr16:53089463-53089199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
34-270
               

               
Cow position:
               
chr16:45703088-45702861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
34-296
               

               
Cow position:
               
chr16:10032520-10032775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
34-299
               

               
Cow position:
               
chr16:13578979-13578720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr16:6692720-6692569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
35-230
               

               
Cow position:
               
chr16:41840769-41840974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
35-291
               

               
Cow position:
               
chr16:50409111-50409377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 203
               

               
Conread position:
               
35-293
               

               
Cow position:
               
chr16:56796784-56796532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 88
               

               
Conread position:
               
35-296
               

               
Cow position:
               
chr16:30662380-30662133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
228, 43
               

               
Conread position:
               
36-278
               

               
Cow position:
               
chr16:22206958-22207196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
36-292
               

               
Cow position:
               
chr16:23730044-23729784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
36-296
               

               
Cow position:
               
chr16:13483691-13483441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
36-298
               

               
Cow position:
               
chr16:34754078-34753821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
228, 104
               

               
Conread position:
               
36-316
               

               
Cow position:
               
chr16:21762089-21761814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
37-278
               

               
Cow position:
               
chr16:54226715-54226481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
227, 79
               

               
Conread position:
               
37-285
               

               
Cow position:
               
chr16:7429261-7429505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
221, 94
               

               
Conread position:
               
37-288
               

               
Cow position:
               
chr16:21317712-21317466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
37-292
               

               
Cow position:
               
chr16:17903766-17903512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
37-297
               

               
Cow position:
               
chr16:18052214-18052468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
227, 73
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr16:30615095-30614953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
38-282
               

               
Cow position:
               
chr16:29677745-29677511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
226, 6
               

               
Conread position:
               
38-288
               

               
Cow position:
               
chr16:47852708-47852466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
227, 77
               

               
Conread position:
               
38-305
               

               
Cow position:
               
chr16:9904975-9905233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
40-317
               

               
Cow position:
               
chr16:33869874-33869612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
41-279
               

               
Cow position:
               
chr16:50667173-50667410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
98, 185
               

               
Conread position:
               
41-281
               

               
Cow position:
               
chr16:11939929-11940159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
42-325
               

               
Cow position:
               
chr16:43674763-43675040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 65
               

               
Conread position:
               
43-301
               

               
Cow position:
               
chr16:42977350-42977609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
44-260
               

               
Cow position:
               
chr16:31163236-31163027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
45-270
               

               
Cow position:
               
chr16:27160974-27160753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
45-309
               

               
Cow position:
               
chr16:22772870-22773127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
45-311
               

               
Cow position:
               
chr16:44683767-44683507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
46-304
               

               
Cow position:
               
chr16:7619284-7619040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
48-218
               

               
Cow position:
               
chr16:1725183-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
48-221
               

               
Cow position:
               
chr16:2417695-2417524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
48-267
               

               
Cow position:
               
chr16:10162712-10162925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
215, 64
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr16:45121933-45122176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
216, 59
               

               
Conread position:
               
48-331
               

               
Cow position:
               
chr16:18141434-18141156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
250, 141
               

               
Conread position:
               
49-295
               

               
Cow position:
               
chr16:30186539-30186778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
207, 82
               

               
Conread position:
               
50-282
               

               
Cow position:
               
chr16:40514584-40514359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 59
               

               
Conread position:
               
51-322
               

               
Cow position:
               
chr16:3114434-3114702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
52-336
               

               
Cow position:
               
chr16:21039926-21040205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
212, 38
               

               
Conread position:
               
55-251
               

               
Cow position:
               
chr16:4970785-4970976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
55-337
               

               
Cow position:
               
chr16:7980694-7980971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr16:33054579-33054340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
59-291
               

               
Cow position:
               
chr16:48545726-48545953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
205, 51
               

               
Conread position:
               
59-329
               

               
Cow position:
               
chr16:12501256-12500991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
61-288
               

               
Cow position:
               
chr16:19670440-19670224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
203, 22
               

               
Conread position:
               
63-288
               

               
Cow position:
               
chr16:34220093-34220315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
201, 160
               

               
Conread position:
               
64-355
               

               
Cow position:
               
chr16:26030973-26030689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
67-284
               

               
Cow position:
               
chr16:30359147-30358938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
68-284
               

               
Cow position:
               
chr16:50931602-50931399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
170, 55
               

               
Conread position:
               
69-292
               

               
Cow position:
               
chr16:11135066-11134851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 13
               

               
Conread position:
               
72-302
               

               
Cow position:
               
chr16:56671002-56670776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
75-273
               

               
Cow position:
               
chr16:8441883-8441693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
75-316
               

               
Cow position:
               
chr16:40700807-40700580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
80-223
               

               
Cow position:
               
chr16:15752630-15752768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr16:29527750-29527969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 146
               

               
Conread position:
               
81-286
               

               
Cow position:
               
chr16:9161006-9161210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 148
               

               
Conread position:
               
81-316
               

               
Cow position:
               
chr16:31426271-31426494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
82-296
               

               
Cow position:
               
chr16:25154817-25154606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 23
               

               
Conread position:
               
83-301
               

               
Cow position:
               
chr16:22327429-22327650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
83-307
               

               
Cow position:
               
chr16:17135657-17135872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
83-337
               

               
Cow position:
               
chr16:46430223-46429963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
84-320
               

               
Cow position:
               
chr16:496445-496217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
85-298
               

               
Cow position:
               
chr16:8673689-8673474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
87-292
               

               
Cow position:
               
chr16:31561685-31561888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 137
               

               
Conread position:
               
93-308
               

               
Cow position:
               
chr16:45044756-45044963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr16:45785675-45785870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
102-347
               

               
Cow position:
               
chr16:13414720-13414479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
104-301
               

               
Cow position:
               
chr16:15953872-15953677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 25
               

               
Conread position:
               
115-288
               

               
Cow position:
               
chr16:13712976-13712804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
118-328
               

               
Cow position:
               
chr16:33530367-33530578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
123-270
               

               
Cow position:
               
chr16:8438688-8438541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
123-302
               

               
Cow position:
               
chr16:15905285-15905109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
124-299
               

               
Cow position:
               
chr16:22738247-22738414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
125-312
               

               
Cow position:
               
chr16:17460138-17460318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
126-304
               

               
Cow position:
               
chr16:30174558-30174387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
126-334
               

               
Cow position:
               
chr16:8206105-8205909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
128-279
               

               
Cow position:
               
chr16:40745387-40745239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 95
               

               
Conread position:
               
129-290
               

               
Cow position:
               
chr16:18953557-18953716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
131-303
               

               
Cow position:
               
chr16:11916242-11916066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 150
               

               
Conread position:
               
132-286
               

               
Cow position:
               
chr16:11359127-11359279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
132, 91
               

               
Conread position:
               
133-289
               

               
Cow position:
               
chr16:17283423-17283575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
138-285
               

               
Cow position:
               
chr16:9596352-9596496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
138-286
               

               
Cow position:
               
chr16:13252324-13252185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
138-292
               

               
Cow position:
               
chr16:9958811-9958963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
138-304
               

               
Cow position:
               
chr16:29026190-29026350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
138-304
               

               
Cow position:
               
chr16:45046818-45046982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chr16:12097623-12097790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr16:48448705-48448882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
138-318
               

               
Cow position:
               
chr16:1415316-1415145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
138-319
               

               
Cow position:
               
chr16:55592546-55592726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
139-294
               

               
Cow position:
               
chr16:50286496-50286647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
139-330
               

               
Cow position:
               
chr16:22824851-22824661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr16:20265573-20265385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 19
               

               
Conread position:
               
146-316
               

               
Cow position:
               
chr16:52363680-52363840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
146-354
               

               
Cow position:
               
chr16:12220671-12220875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
148-308
               

               
Cow position:
               
chr16:12454796-12454641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
150-290
               

               
Cow position:
               
chr16:34412803-34412939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
114, 46
               

               
Conread position:
               
153-284
               

               
Cow position:
               
chr16:9836776-9836649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
153-330
               

               
Cow position:
               
chr16:17292025-17291849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
154-288
               

               
Cow position:
               
chr16:30211452-30211583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 69
               

               
Conread position:
               
154-294
               

               
Cow position:
               
chr16:45438957-45439098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
158-300
               

               
Cow position:
               
chr16:21974960-21974824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
164-290
               

               
Cow position:
               
chr16:9513302-9513425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
164-306
               

               
Cow position:
               
chr16:15203361-15203222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 59
               

               
Conread position:
               
164-310
               

               
Cow position:
               
chr16:18156162-18156301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
165-319
               

               
Cow position:
               
chr16:39416826-39416676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
166-305
               

               
Cow position:
               
chr16:12091653-12091517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
170-323
               

               
Cow position:
               
chr16:7155657-7155497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 155
               

               
Conread position:
               
176-318
               

               
Cow position:
               
chr16:16280353-16280214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
177-329
               

               
Cow position:
               
chr16:33752754-33752902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
178-299
               

               
Cow position:
               
chr16:26069772-26069889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
178-329
               

               
Cow position:
               
chr16:34433504-34433359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
179-306
               

               
Cow position:
               
chr16:12281173-12281050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
179-314
               

               
Cow position:
               
chr16:51915593-51915724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
180-330
               

               
Cow position:
               
chr16:7601017-7601169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
180-330
               

               
Cow position:
               
chr16:17424971-17424829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
181-329
               

               
Cow position:
               
chr16:52803930-52803783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
184-300
               

               
Cow position:
               
chr16:29060405-29060518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
184-307
               

               
Cow position:
               
chr16:43322877-43322997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
190-330
               

               
Cow position:
               
chr16:48099494-48099633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
193-304
               

               
Cow position:
               
chr16:23187581-23187687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
202-330
               

               
Cow position:
               
chr16:39238294-39238428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.