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Cow genome map

           
Conread name:
           
rcbl0_019670.y1
        

               
Conread position:
               
1-127
               

               
Cow position:
               
chr20:8020789-8020914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr20:27003845-27003652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr20:4892932-4892734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr20:10884470-10884262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 103
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr20:18500103-18500303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr20:3740110-3739897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr20:11340911-11340697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr20:34918163-34918378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 18
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr20:31740330-31740105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr20:24000908-24000666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr20:11542394-11542144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr20:14759776-14759514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr20:40127446-40127185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
37, 112
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr20:4334632-4334362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 21
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr20:36010683-36010967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr20:20967219-20967495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:1139885-1139591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
68, 212
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:3141467-3141750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr20:33435279-33434982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr20:4945358-4945074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr20:9267209-9266926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr20:20099705-20099418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr20:40185790-40185491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 76
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr20:3321250-3320955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr20:6096601-6096306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 7
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr20:20739401-20739094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
38, 137
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr20:38578873-38578571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 46
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr20:32988948-32988619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr20:34901460-34901790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
230, 41
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr20:17845853-17846169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
2-125
               

               
Cow position:
               
chr20:12334264-12334391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr20:7659330-7659109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr20:20471682-20471891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr20:34084958-34085184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
180, 118
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr20:14806777-14807031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr20:34108006-34108258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr20:14572471-14572209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
2-276
               

               
Cow position:
               
chr20:42197223-42197473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
261, 41
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr20:15549005-15548714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr20:12420726-12420443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
262, 40
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr20:21019455-21019736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr20:22484752-22485036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr20:29844940-29845231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr20:35364938-35365224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr20:10188167-10188451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr20:7362861-7363157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr20:25686457-25686150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr20:271535-271316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr20:32523354-32523571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr20:32662010-32661779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
6-157
               

               
Cow position:
               
chr20:20312850-20312704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr20:35009850-35009566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 227
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr20:9701680-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
7-160
               

               
Cow position:
               
chr20:3781529-3781377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-160
               

               
Cow position:
               
chr20:27339962-27340109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-166
               

               
Cow position:
               
chr20:26680021-26680176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
7-170
               

               
Cow position:
               
chr20:23936516-23936348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr20:9379306-9379465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
7-173
               

               
Cow position:
               
chr20:32068956-32068792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr20:24391881-24392039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr20:31077449-31077616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
7-179
               

               
Cow position:
               
chr20:24521648-24521814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
7-184
               

               
Cow position:
               
chr20:17904057-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
7-189
               

               
Cow position:
               
chr20:28831865-28832047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
175, 116
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr20:13967363-13967169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr20:30817432-30817624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr20:14735573-14735759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr20:10348643-10348845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 126
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr20:19616383-19616599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr20:13493631-13493849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
147, 103
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr20:40256865-40257079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr20:11453458-11453245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr20:30992036-30992275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr20:23792508-23792748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-262
               

               
Cow position:
               
chr20:25162231-25161981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 35
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr20:26076981-26077228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr20:35797506-35797755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-264
               

               
Cow position:
               
chr20:40449907-40450169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr20:5385845-5385593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
7-268
               

               
Cow position:
               
chr20:36040368-36040626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr20:9433484-9433740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 45
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr20:18320894-18320641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr20:22978218-22978480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
7-270
               

               
Cow position:
               
chr20:36207703-36207967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr20:33532205-33532469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr20:6602937-6603207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-284
               

               
Cow position:
               
chr20:13025713-13025443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
7-285
               

               
Cow position:
               
chr20:34251786-34251504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr20:8556373-8556099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
138, 36
               

               
Conread position:
               
7-287
               

               
Cow position:
               
chr20:38768559-38768293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
253, 35
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr20:4205864-4206136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr20:13652461-13652196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr20:15569049-15568778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 98
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr20:11188908-11188635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr20:17251606-17251890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr20:12239779-12239510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr20:14879687-14879962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
97, 32
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr20:32463624-32463349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-292
               

               
Cow position:
               
chr20:39418002-39417728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr20:6240624-6240344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr20:24711732-24712020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 211
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr20:33067476-33067183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
7-295
               

               
Cow position:
               
chr20:13994710-13994992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
197, 91
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:6054621-6054330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 218
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:10200244-10200525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:14433531-14433244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:22959445-22959169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 71
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:30710749-30710458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 145
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:31289395-31289683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr20:34098061-34097774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr20:34221377-34221658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr20:38847338-38847051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr20:42469659-42469946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
253, 15
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr20:17470631-17470912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 74
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr20:21928801-21929097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr20:28067529-28067230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr20:21714649-21714965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
7-316
               

               
Cow position:
               
chr20:39267062-39266759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr20:5826838-5827140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
257, 35
               

               
Conread position:
               
7-317
               

               
Cow position:
               
chr20:28296188-28296496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
157, 103
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr20:9537031-9537341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
7-329
               

               
Cow position:
               
chr20:21761673-21761984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
7-330
               

               
Cow position:
               
chr20:5636381-5636695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 35
               

               
Conread position:
               
7-351
               

               
Cow position:
               
chr20:34777081-34777413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
7-353
               

               
Cow position:
               
chr20:12996111-12995766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
8-161
               

               
Cow position:
               
chr20:6848524-6848678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
8-182
               

               
Cow position:
               
chr20:18185467-18185635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
137, 36
               

               
Conread position:
               
8-189
               

               
Cow position:
               
chr20:31261622-31261800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
174, 60
               

               
Conread position:
               
8-209
               

               
Cow position:
               
chr20:35958543-35958743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
8-218
               

               
Cow position:
               
chr20:20353019-20352808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr20:13794887-13795100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr20:28955804-28955563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
8-267
               

               
Cow position:
               
chr20:24833992-24834239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
8-270
               

               
Cow position:
               
chr20:4621447-4621201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
118, 152
               

               
Conread position:
               
8-276
               

               
Cow position:
               
chr20:40511860-40511597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
8-285
               

               
Cow position:
               
chr20:35907154-35906882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
172, 112
               

               
Conread position:
               
8-290
               

               
Cow position:
               
chr20:12582050-12581780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
256, 16
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr20:21372218-21372482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr20:19751206-19751483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 34
               

               
Conread position:
               
8-293
               

               
Cow position:
               
chr20:40446229-40446504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
8-295
               

               
Cow position:
               
chr20:32583205-32583496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 221
               

               
Conread position:
               
8-296
               

               
Cow position:
               
chr20:28249081-28249359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
8-302
               

               
Cow position:
               
chr20:36779832-36779543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr20:7550139-7550461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
251, 37
               

               
Conread position:
               
9-190
               

               
Cow position:
               
chr20:11923344-11923172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
9-217
               

               
Cow position:
               
chr20:19146773-19146981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 103
               

               
Conread position:
               
9-218
               

               
Cow position:
               
chr20:11176344-11176143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
9-265
               

               
Cow position:
               
chr20:38817905-38818147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr20:15235668-15235901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
251, 33
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr20:14540251-14540494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr20:23541257-23540993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr20:42458950-42458688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
255, 33
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr20:28982598-28982874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr20:7442227-7441963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr20:5814473-5814745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
255, 61
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr20:33976383-33976672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
162, 10
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr20:23064930-23064638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 33
               

               
Conread position:
               
9-314
               

               
Cow position:
               
chr20:39728347-39728647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 123
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr20:15565928-15565630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
10-138
               

               
Cow position:
               
chr20:17733876-17733747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
10-168
               

               
Cow position:
               
chr20:26469164-26469008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr20:39325289-39325498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr20:17765430-17765198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
10-272
               

               
Cow position:
               
chr20:33144655-33144398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr20:15312564-15312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr20:19236978-19237247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
251, 82
               

               
Conread position:
               
10-292
               

               
Cow position:
               
chr20:14980611-14980331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
10-298
               

               
Cow position:
               
chr20:40781866-40782143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr20:581021-580736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 32
               

               
Conread position:
               
10-336
               

               
Cow position:
               
chr20:14100536-14100212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
12-290
               

               
Cow position:
               
chr20:7738324-7738058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
252, 30
               

               
Conread position:
               
13-141
               

               
Cow position:
               
chr20:38935333-38935209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
13-183
               

               
Cow position:
               
chr20:39247815-39247982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
13-209
               

               
Cow position:
               
chr20:21698290-21698489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
150, 110
               

               
Conread position:
               
13-214
               

               
Cow position:
               
chr20:28804466-28804670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr20:23103123-23103330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 29
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr20:7438949-7438707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
13-263
               

               
Cow position:
               
chr20:11741397-11741160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
13-270
               

               
Cow position:
               
chr20:20983901-20984145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 28
               

               
Conread position:
               
13-289
               

               
Cow position:
               
chr20:39415647-39415922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
97, 212
               

               
Conread position:
               
13-296
               

               
Cow position:
               
chr20:26996437-26996710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
251, 33
               

               
Conread position:
               
13-299
               

               
Cow position:
               
chr20:23846766-23846482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
13-303
               

               
Cow position:
               
chr20:11482232-11481949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 97
               

               
Conread position:
               
13-331
               

               
Cow position:
               
chr20:40691959-40692277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
14-201
               

               
Cow position:
               
chr20:39377251-39377079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
15-199
               

               
Cow position:
               
chr20:41174258-41174078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
15-307
               

               
Cow position:
               
chr20:15822457-15822735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
15-309
               

               
Cow position:
               
chr20:34787038-34786760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
15-316
               

               
Cow position:
               
chr20:36633722-36634011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
18-263
               

               
Cow position:
               
chr20:22265337-22265107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
18-292
               

               
Cow position:
               
chr20:10208714-10208983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
18-323
               

               
Cow position:
               
chr20:13983271-13983561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
244, 28
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr20:37272621-37272774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
19-199
               

               
Cow position:
               
chr20:283016-282840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 43
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr20:15118185-15118383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
19-265
               

               
Cow position:
               
chr20:33363426-33363665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
19-275
               

               
Cow position:
               
chr20:41627438-41627183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr20:12205822-12205561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
20-207
               

               
Cow position:
               
chr20:40726679-40726502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
20-262
               

               
Cow position:
               
chr20:30887943-30888179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
150, 61
               

               
Conread position:
               
20-270
               

               
Cow position:
               
chr20:34597190-34596945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
20-275
               

               
Cow position:
               
chr20:18622491-18622732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
242, 90
               

               
Conread position:
               
20-300
               

               
Cow position:
               
chr20:28594193-28594470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr20:8098193-8098393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr20:11045585-11045844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
109, 123
               

               
Conread position:
               
21-288
               

               
Cow position:
               
chr20:25009726-25009459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr20:38873097-38872825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
21-311
               

               
Cow position:
               
chr20:41883647-41883924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
240, 21
               

               
Conread position:
               
21-353
               

               
Cow position:
               
chr20:5078532-5078863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 203
               

               
Conread position:
               
23-294
               

               
Cow position:
               
chr20:11135844-11135576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 46
               

               
Conread position:
               
24-265
               

               
Cow position:
               
chr20:6423886-6424115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
224, 18
               

               
Conread position:
               
24-286
               

               
Cow position:
               
chr20:32866273-32866027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
24-308
               

               
Cow position:
               
chr20:18392347-18392080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
240, 98
               

               
Conread position:
               
24-318
               

               
Cow position:
               
chr20:38551287-38551564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 96
               

               
Conread position:
               
25-207
               

               
Cow position:
               
chr20:11864218-11864039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 87
               

               
Conread position:
               
25-280
               

               
Cow position:
               
chr20:5644702-5644950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
25-294
               

               
Cow position:
               
chr20:36741391-36741640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
239, 17
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr20:34001477-34001261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
96, 106
               

               
Conread position:
               
28-327
               

               
Cow position:
               
chr20:4332053-4332341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr20:16818335-16818526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr20:33819136-33819329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
30-275
               

               
Cow position:
               
chr20:11548803-11548566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
31-224
               

               
Cow position:
               
chr20:40745360-40745566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
31-289
               

               
Cow position:
               
chr20:32709528-32709273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
31-316
               

               
Cow position:
               
chr20:33439058-33438783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr20:12064849-12065023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr20:37357531-37357678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr20:5078124-5078273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
35-216
               

               
Cow position:
               
chr20:28819006-28818823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
35-262
               

               
Cow position:
               
chr20:30119649-30119433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
35-270
               

               
Cow position:
               
chr20:11359708-11359479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 102
               

               
Conread position:
               
35-284
               

               
Cow position:
               
chr20:35192702-35192932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
229, 74
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr20:41403502-41403647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
36-262
               

               
Cow position:
               
chr20:38670684-38670894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
36-275
               

               
Cow position:
               
chr20:16491997-16492231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
37-290
               

               
Cow position:
               
chr20:17100287-17100534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
37-304
               

               
Cow position:
               
chr20:21721136-21721397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
38-299
               

               
Cow position:
               
chr20:16548350-16548095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 92
               

               
Conread position:
               
39-293
               

               
Cow position:
               
chr20:21428094-21428335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
123, 32
               

               
Conread position:
               
39-295
               

               
Cow position:
               
chr20:10996037-10996287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
222, 107
               

               
Conread position:
               
40-302
               

               
Cow position:
               
chr20:12085495-12085252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
224, 83
               

               
Conread position:
               
41-287
               

               
Cow position:
               
chr20:9376398-9376638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
41-293
               

               
Cow position:
               
chr20:14563984-14564227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
215, 69
               

               
Conread position:
               
41-296
               

               
Cow position:
               
chr20:6248665-6248422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
41-332
               

               
Cow position:
               
chr20:23506539-23506261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 82
               

               
Conread position:
               
43-168
               

               
Cow position:
               
chr20:41973818-41973695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
43-296
               

               
Cow position:
               
chr20:38089844-38090092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
220, 96
               

               
Conread position:
               
44-288
               

               
Cow position:
               
chr20:21345361-21345604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
44-296
               

               
Cow position:
               
chr20:11008104-11008349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
219, 55
               

               
Conread position:
               
46-290
               

               
Cow position:
               
chr20:16941354-16941115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
48-263
               

               
Cow position:
               
chr20:7624309-7624100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
196, 41
               

               
Conread position:
               
48-295
               

               
Cow position:
               
chr20:354959-354723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
216, 82
               

               
Conread position:
               
48-340
               

               
Cow position:
               
chr20:20056547-20056266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
49-296
               

               
Cow position:
               
chr20:23850559-23850798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
50-296
               

               
Cow position:
               
chr20:25953197-25953443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
52-296
               

               
Cow position:
               
chr20:39962517-39962754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
212, 60
               

               
Conread position:
               
53-307
               

               
Cow position:
               
chr20:38514724-38514968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
211, 58
               

               
Conread position:
               
57-318
               

               
Cow position:
               
chr20:10772150-10772407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
203, 72
               

               
Conread position:
               
58-288
               

               
Cow position:
               
chr20:5702670-5702897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
60-294
               

               
Cow position:
               
chr20:20898641-20898413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
64-312
               

               
Cow position:
               
chr20:24902345-24902098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr20:40157862-40158099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
192, 59
               

               
Conread position:
               
74-329
               

               
Cow position:
               
chr20:7709822-7709568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
76-298
               

               
Cow position:
               
chr20:21815526-21815742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
86-328
               

               
Cow position:
               
chr20:26723699-26723471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
178, 35
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr20:12126328-12126125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
177, 25
               

               
Conread position:
               
91-302
               

               
Cow position:
               
chr20:6372581-6372379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
99-317
               

               
Cow position:
               
chr20:35460553-35460334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
106-295
               

               
Cow position:
               
chr20:10818250-10818063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
118-282
               

               
Cow position:
               
chr20:4002100-4002258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
120-294
               

               
Cow position:
               
chr20:17388536-17388709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
120-304
               

               
Cow position:
               
chr20:16405620-16405798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
120-330
               

               
Cow position:
               
chr20:35591645-35591436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
126-293
               

               
Cow position:
               
chr20:23678706-23678539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
126-296
               

               
Cow position:
               
chr20:15529870-15530039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
129-296
               

               
Cow position:
               
chr20:5364945-5365105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 58
               

               
Conread position:
               
139-305
               

               
Cow position:
               
chr20:33820480-33820642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr20:11444104-11444309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
145-295
               

               
Cow position:
               
chr20:36239278-36239425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 78
               

               
Conread position:
               
145-296
               

               
Cow position:
               
chr20:25021459-25021607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
152-293
               

               
Cow position:
               
chr20:7155219-7155354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
156-290
               

               
Cow position:
               
chr20:2316383-2316252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 70
               

               
Conread position:
               
158-263
               

               
Cow position:
               
chr20:15488750-15488851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
159-299
               

               
Cow position:
               
chr20:2148147-2148011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr20:35211212-35211048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
164-302
               

               
Cow position:
               
chr20:8021176-8021311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
164-320
               

               
Cow position:
               
chr20:7622931-7622780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
164-329
               

               
Cow position:
               
chr20:24392234-24392388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
165-301
               

               
Cow position:
               
chr20:19834779-19834647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
168-293
               

               
Cow position:
               
chr20:20312456-20312334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
169-275
               

               
Cow position:
               
chr20:18395980-18396083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
169-357
               

               
Cow position:
               
chr20:2822925-2823112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
171-300
               

               
Cow position:
               
chr20:13617283-13617408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
172-285
               

               
Cow position:
               
chr20:38934997-38934888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
177-337
               

               
Cow position:
               
chr20:41274835-41274678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
178-300
               

               
Cow position:
               
chr20:15515376-15515257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
179-319
               

               
Cow position:
               
chr20:15547255-15547392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
180-333
               

               
Cow position:
               
chr20:37229018-37228869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
180-341
               

               
Cow position:
               
chr20:26059164-26059004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
184-329
               

               
Cow position:
               
chr20:36203519-36203376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
188-330
               

               
Cow position:
               
chr20:36023326-36023187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
189-327
               

               
Cow position:
               
chr20:27325013-27325146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
191-307
               

               
Cow position:
               
chr20:26790534-26790423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 32
               
Show alignments to all cow chromosomes.