Cow genome map

Conread name: rcbl0_023350.y1

Conread position: 1-128
Cow position: chr6:41147456-41147334 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-134
Cow position: chr6:65831600-65831469 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 76

Conread position: 1-151
Cow position: chr6:55945719-55945872 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-158
Cow position: chr6:3937024-3936867 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 75

Conread position: 1-160
Cow position: chr6:24514297-24514462 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 1-164
Cow position: chr6:19225155-19225305 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1-165
Cow position: chr6:53811823-53811660 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 77

Conread position: 1-167
Cow position: chr6:2078579-2078739 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 65

Conread position: 1-167
Cow position: chr6:16137530-16137695 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 76

Conread position: 1-167
Cow position: chr6:35984897-35985061 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 26, 82

Conread position: 1-167
Cow position: chr6:53732222-53732057 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 78

Conread position: 1-167
Cow position: chr6:66979108-66978942 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 65

Conread position: 1-168
Cow position: chr6:1173710-1173882 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-168
Cow position: chr6:8186950-8187115 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 24, 78

Conread position: 1-168
Cow position: chr6:19936331-19936495 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 76

Conread position: 1-168
Cow position: chr6:24903338-24903503 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 24, 78

Conread position: 1-168
Cow position: chr6:42483652-42483489 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 24, 65

Conread position: 1-168
Cow position: chr6:45159818-45159983 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 78

Conread position: 1-168
Cow position: chr6:47540603-47540768 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 76

Conread position: 1-168
Cow position: chr6:57467836-57467671 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 77

Conread position: 1-168
Cow position: chr6:68246594-68246759 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 77

Conread position: 1-180
Cow position: chr6:62805882-62805705 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 24, 82

Conread position: 1-184
Cow position: chr6:57300007-57299817 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1-187
Cow position: chr6:28561931-28562113 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 76

Conread position: 1-187
Cow position: chr6:34076400-34076215 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 65

Conread position: 1-187
Cow position: chr6:49686057-49685872 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 78

Conread position: 1-190
Cow position: chr6:17404800-17404613 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 23

Conread position: 1-195
Cow position: chr6:54821071-54820880 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 78

Conread position: 1-196
Cow position: chr6:24776375-24776186 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 75

Conread position: 1-198
Cow position: chr6:26408265-26408461 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 24, 71

Conread position: 1-199
Cow position: chr6:13742224-13742033 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 76

Conread position: 1-199
Cow position: chr6:36225347-36225153 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 76

Conread position: 1-200
Cow position: chr6:34569653-34569449 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 110

Conread position: 1-200
Cow position: chr6:57248754-57248559 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 1-206
Cow position: chr6:47246019-47245816 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 65

Conread position: 1-207
Cow position: chr6:41014737-41014944 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 77

Conread position: 1-207
Cow position: chr6:50771124-50771324 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 77

Conread position: 1-207
Cow position: chr6:54831715-54831511 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 76

Conread position: 1-207
Cow position: chr6:55296855-55297060 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 78

Conread position: 1-214
Cow position: chr6:33150057-33150265 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 75

Conread position: 1-214
Cow position: chr6:57079663-57079450 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 78

Conread position: 1-217
Cow position: chr6:62437654-62437438 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 65

Conread position: 1-225
Cow position: chr6:12965091-12964868 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 105, 28

Conread position: 1-227
Cow position: chr6:5330651-5330427 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 76

Conread position: 1-270
Cow position: chr6:47959042-47958768 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 184, 23

Conread position: 1-287
Cow position: chr6:60468468-60468176 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 27

Conread position: 1-304
Cow position: chr6:8600242-8599925 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 88, 38

Conread position: 1-308
Cow position: chr6:143141-143451 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 73

Conread position: 1-321
Cow position: chr6:33510023-33509692 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 180, 23

Conread position: 1-335
Cow position: chr6:62370950-62371286 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 208, 27

Conread position: 1-343
Cow position: chr6:22850015-22850358 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 15

Conread position: 1-346
Cow position: chr6:15300603-15300935 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 65

Conread position: 1-351
Cow position: chr6:18080279-18080629 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 76

Conread position: 1-351
Cow position: chr6:32126289-32125950 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 22, 65

Conread position: 1-352
Cow position: chr6:13040690-13040335 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 45

Conread position: 1-352
Cow position: chr6:43134704-43135066 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 47

Conread position: 1-352
Cow position: chr6:55282055-55282408 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 138, 63

Conread position: 1-352
Cow position: chr6:57545992-57546336 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 23

Conread position: 1-353
Cow position: chr6:17313975-17313611 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 24, 85

Conread position: 1-353
Cow position: chr6:21004917-21004545 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 23, 77

Conread position: 1-353
Cow position: chr6:53138701-53139048 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 1-353
Cow position: chr6:63251684-63252046 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 23, 79

Conread position: 1-353
Cow position: chr6:67574627-67574288 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 65

Conread position: 1-354
Cow position: chr6:3952758-3952398 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 77

Conread position: 1-354
Cow position: chr6:9219500-9219149 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 75

Conread position: 1-354
Cow position: chr6:12669335-12668979 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 77

Conread position: 1-354
Cow position: chr6:21535277-21534931 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 75

Conread position: 1-354
Cow position: chr6:33302633-33302284 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 73

Conread position: 1-354
Cow position: chr6:38610211-38609844 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 24, 105

Conread position: 1-354
Cow position: chr6:61631371-61631733 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 90, 23

Conread position: 2-151
Cow position: chr6:26764586-26764736 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 84

Conread position: 2-151
Cow position: chr6:54828084-54828231 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 64

Conread position: 2-157
Cow position: chr6:31928875-31928722 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 77

Conread position: 2-163
Cow position: chr6:47356062-47355903 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 51

Conread position: 2-164
Cow position: chr6:14152655-14152812 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 2-165
Cow position: chr6:18440242-18440400 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 2-165
Cow position: chr6:54840264-54840430 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 2-167
Cow position: chr6:4760229-4760067 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 64

Conread position: 2-167
Cow position: chr6:14150145-14150304 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 2-167
Cow position: chr6:16411849-16411686 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 77

Conread position: 2-167
Cow position: chr6:44543911-44544073 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 77

Conread position: 2-167
Cow position: chr6:58697393-58697556 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 84

Conread position: 2-167
Cow position: chr6:62224657-62224497 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 18

Conread position: 2-167
Cow position: chr6:62724794-62724631 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 83

Conread position: 2-168
Cow position: chr6:59101083-59101247 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 86

Conread position: 2-169
Cow position: chr6:56581818-56581985 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 76

Conread position: 2-191
Cow position: chr6:29851604-29851419 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 78

Conread position: 2-191
Cow position: chr6:57089440-57089255 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 77

Conread position: 2-200
Cow position: chr6:15587356-15587553 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 85

Conread position: 2-200
Cow position: chr6:61681314-61681121 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 75

Conread position: 2-206
Cow position: chr6:21475961-21475763 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 184, 73

Conread position: 2-207
Cow position: chr6:6201669-6201459 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 2-207
Cow position: chr6:8366050-8365846 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 63

Conread position: 2-207
Cow position: chr6:22876692-22876896 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 77

Conread position: 2-207
Cow position: chr6:24536290-24536497 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 64

Conread position: 2-207
Cow position: chr6:66259973-66259764 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 75

Conread position: 2-207
Cow position: chr6:67728614-67728410 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 81

Conread position: 2-215
Cow position: chr6:35181018-35181230 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 64

Conread position: 2-239
Cow position: chr6:21183987-21184220 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 75

Conread position: 2-248
Cow position: chr6:58304648-58304404 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 186, 18

Conread position: 2-285
Cow position: chr6:51529954-51530245 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 186, 22

Conread position: 2-318
Cow position: chr6:24110520-24110196 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 77

Conread position: 2-346
Cow position: chr6:19402081-19401741 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 24, 69

Conread position: 2-350
Cow position: chr6:18447279-18447626 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 23, 73

Conread position: 2-351
Cow position: chr6:7103003-7103353 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 23, 79

Conread position: 2-352
Cow position: chr6:16700490-16700137 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 85

Conread position: 2-353
Cow position: chr6:4469002-4468636 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 83

Conread position: 2-353
Cow position: chr6:10176063-10176422 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 2-353
Cow position: chr6:21399518-21399876 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 39

Conread position: 2-354
Cow position: chr6:19996851-19996497 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 23, 76

Conread position: 2-354
Cow position: chr6:53932609-53932972 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 75

Conread position: 3-199
Cow position: chr6:6060339-6060527 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 3-206
Cow position: chr6:32453624-32453421 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 76

Conread position: 5-137
Cow position: chr6:59597973-59597844 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 5-151
Cow position: chr6:16016268-16016125 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 20, 72

Conread position: 5-155
Cow position: chr6:50444882-50445030 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 74

Conread position: 5-166
Cow position: chr6:36570699-36570536 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 5-167
Cow position: chr6:16502809-16502970 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 73

Conread position: 5-168
Cow position: chr6:23024865-23025026 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 41

Conread position: 5-180
Cow position: chr6:13097165-13097335 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 73

Conread position: 5-184
Cow position: chr6:36939107-36938926 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 5-187
Cow position: chr6:21052213-21052394 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 77

Conread position: 5-200
Cow position: chr6:26054667-26054859 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 87

Conread position: 5-200
Cow position: chr6:53711636-53711444 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 70

Conread position: 5-207
Cow position: chr6:12761513-12761314 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 37

Conread position: 5-207
Cow position: chr6:43787675-43787876 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 73

Conread position: 5-207
Cow position: chr6:47648001-47648201 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 75

Conread position: 5-207
Cow position: chr6:47783100-47782896 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 75

Conread position: 5-208
Cow position: chr6:48436063-48435868 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 32

Conread position: 5-257
Cow position: chr6:61883940-61884191 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 84

Conread position: 5-274
Cow position: chr6:23353789-23353505 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 105

Conread position: 5-301
Cow position: chr6:16287834-16288127 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 187, 28

Conread position: 5-324
Cow position: chr6:17794522-17794850 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 64

Conread position: 5-342
Cow position: chr6:10039959-10039609 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 67

Conread position: 5-346
Cow position: chr6:1704027-1703702 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 202, 19

Conread position: 5-346
Cow position: chr6:10399675-10400017 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 19, 124

Conread position: 5-346
Cow position: chr6:46558287-46557930 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 61

Conread position: 5-350
Cow position: chr6:24781318-24781679 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 20, 124

Conread position: 5-350
Cow position: chr6:65264318-65264656 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 57

Conread position: 5-352
Cow position: chr6:10225417-10225761 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 23, 94

Conread position: 5-352
Cow position: chr6:12338223-12337862 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 315

Conread position: 5-352
Cow position: chr6:15937619-15937970 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 72

Conread position: 5-352
Cow position: chr6:57404903-57405251 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 20, 95

Conread position: 5-353
Cow position: chr6:15243072-15242713 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 70

Conread position: 5-353
Cow position: chr6:19045861-19045500 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 69

Conread position: 5-353
Cow position: chr6:19446486-19446136 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 59

Conread position: 5-353
Cow position: chr6:34195929-34196273 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 61

Conread position: 5-353
Cow position: chr6:52413092-52412735 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 17

Conread position: 5-353
Cow position: chr6:58370980-58370620 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 19, 61

Conread position: 5-354
Cow position: chr6:17997084-17997439 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 57

Conread position: 5-354
Cow position: chr6:31847011-31847344 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 70

Conread position: 5-354
Cow position: chr6:53453999-53453644 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 15

Conread position: 6-352
Cow position: chr6:38853424-38853776 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 18, 69

Conread position: 7-199
Cow position: chr6:60852402-60852601 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 152

Conread position: 7-207
Cow position: chr6:15446962-15447163 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 80

Conread position: 7-207
Cow position: chr6:54846045-54846244 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 73

Conread position: 7-334
Cow position: chr6:44078746-44078414 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 71

Conread position: 7-340
Cow position: chr6:14914003-14914355 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 40

Conread position: 7-349
Cow position: chr6:32268656-32268995 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 58

Conread position: 7-352
Cow position: chr6:60057407-60057778 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 294

Conread position: 8-353
Cow position: chr6:64432163-64431816 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 54

Conread position: 9-144
Cow position: chr6:30688280-30688413 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 57

Conread position: 9-205
Cow position: chr6:13565315-13565125 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 69

Conread position: 9-273
Cow position: chr6:2585170-2584894 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 16, 70

Conread position: 9-350
Cow position: chr6:15243488-15243136 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 19

Conread position: 9-353
Cow position: chr6:62670100-62669751 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 78

Conread position: 10-148
Cow position: chr6:23381438-23381574 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 69

Conread position: 10-151
Cow position: chr6:57935348-57935481 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 10-163
Cow position: chr6:27219394-27219247 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 56

Conread position: 10-164
Cow position: chr6:10163902-10163744 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 10-170
Cow position: chr6:28559768-28559610 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 13, 67

Conread position: 10-170
Cow position: chr6:45094806-45094645 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 79

Conread position: 10-199
Cow position: chr6:19563251-19563439 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 76

Conread position: 10-207
Cow position: chr6:8161457-8161659 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 69

Conread position: 10-207
Cow position: chr6:11246996-11246801 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 68

Conread position: 10-222
Cow position: chr6:43906453-43906666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 70

Conread position: 10-346
Cow position: chr6:5095314-5095670 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 159, 18

Conread position: 10-352
Cow position: chr6:38207258-38207613 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 15, 25

Conread position: 10-353
Cow position: chr6:2896969-2896630 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 69

Conread position: 11-179
Cow position: chr6:41733862-41733696 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 65

Conread position: 11-200
Cow position: chr6:14471592-14471403 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 66

Conread position: 11-340
Cow position: chr6:61644629-61644945 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 14, 69

Conread position: 11-350
Cow position: chr6:61514971-61515316 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 45

Conread position: 12-294
Cow position: chr6:24339515-24339216 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 93

Conread position: 19-183
Cow position: chr6:67187898-67187744 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 21-199
Cow position: chr6:15974308-15974475 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 21-208
Cow position: chr6:48792995-48792805 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 149, 56

Conread position: 21-208
Cow position: chr6:66947608-66947784 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 21-273
Cow position: chr6:51666120-51666373 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 167, 57

Conread position: 21-342
Cow position: chr6:46173043-46173370 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 235
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 188, 48

Conread position: 21-352
Cow position: chr6:5113832-5114167 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 87, 102

Conread position: 21-354
Cow position: chr6:54365114-54365452 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 57

Conread position: 22-168
Cow position: chr6:55061084-55060937 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 44

Conread position: 22-191
Cow position: chr6:54889818-54889651 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 55

Conread position: 22-199
Cow position: chr6:15058589-15058421 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 22-207
Cow position: chr6:16380761-16380579 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 56

Conread position: 22-328
Cow position: chr6:27239790-27240104 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 42

Conread position: 22-346
Cow position: chr6:53841289-53841615 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 41

Conread position: 22-353
Cow position: chr6:28483231-28482896 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 62

Conread position: 22-353
Cow position: chr6:31814532-31814860 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 170, 63

Conread position: 22-354
Cow position: chr6:66131533-66131179 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 88

Conread position: 24-142
Cow position: chr6:50682087-50682201 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 24-167
Cow position: chr6:14263677-14263815 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 133, 54

Conread position: 24-167
Cow position: chr6:60186442-60186587 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 24-168
Cow position: chr6:32336251-32336106 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 24-180
Cow position: chr6:39415037-39414885 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 46

Conread position: 24-183
Cow position: chr6:47450707-47450862 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 39

Conread position: 24-193
Cow position: chr6:28088835-28088999 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 162, 38

Conread position: 24-198
Cow position: chr6:36163958-36163789 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 47

Conread position: 24-198
Cow position: chr6:42567708-42567538 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 54

Conread position: 24-206
Cow position: chr6:65534956-65535135 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 164, 54

Conread position: 24-207
Cow position: chr6:9718705-9718877 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 24-207
Cow position: chr6:37395191-37395366 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 45

Conread position: 24-207
Cow position: chr6:48379399-48379579 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 166, 54

Conread position: 24-207
Cow position: chr6:50090857-50090677 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 76, 51

Conread position: 24-334
Cow position: chr6:43345228-43345550 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 162, 64

Conread position: 24-350
Cow position: chr6:4383686-4383366 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 162, 44

Conread position: 24-351
Cow position: chr6:65702197-65702522 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 73, 50

Conread position: 24-353
Cow position: chr6:445540-445192 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 240
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 139, 53

Conread position: 24-353
Cow position: chr6:2607820-2607494 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 231
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 54

Conread position: 24-353
Cow position: chr6:4691753-4692103 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 56, 107

Conread position: 24-353
Cow position: chr6:37246227-37246549 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 164, 57

Conread position: 24-353
Cow position: chr6:55689241-55688916 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 54

Conread position: 24-354
Cow position: chr6:19696021-19695682 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 145, 53

Conread position: 24-354
Cow position: chr6:47305554-47305215 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 164, 69

Conread position: 24-354
Cow position: chr6:59620868-59620545 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 54

Conread position: 24-354
Cow position: chr6:60740222-60739891 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 176, 38

Conread position: 25-272
Cow position: chr6:8369635-8369394 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 52

Conread position: 25-353
Cow position: chr6:10331887-10332215 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 89, 56

Conread position: 26-183
Cow position: chr6:18599040-18599192 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 26-205
Cow position: chr6:66434164-66433987 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 112, 56

Conread position: 26-350
Cow position: chr6:35842870-35842530 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 57

Conread position: 26-352
Cow position: chr6:13367492-13367171 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 162, 48

Conread position: 26-352
Cow position: chr6:48988644-48988315 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 66, 49

Conread position: 27-167
Cow position: chr6:33290180-33290044 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 27-184
Cow position: chr6:30895781-30895933 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 27-275
Cow position: chr6:56986439-56986695 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 142, 50

Conread position: 27-335
Cow position: chr6:6227220-6226918 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 52

Conread position: 27-353
Cow position: chr6:21587225-21587540 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 161, 35

Conread position: 27-353
Cow position: chr6:50984434-50984105 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 49

Conread position: 29-184
Cow position: chr6:8731631-8731472 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 105

Conread position: 29-214
Cow position: chr6:35318926-35319107 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 55

Conread position: 29-268
Cow position: chr6:7801188-7801436 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 156, 39

Conread position: 30-197
Cow position: chr6:69153618-69153454 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 34

Conread position: 30-303
Cow position: chr6:17816785-17817059 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 55

Conread position: 31-167
Cow position: chr6:21467060-21467192 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 31-167
Cow position: chr6:31865300-31865168 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 32-151
Cow position: chr6:15111631-15111750 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 32-199
Cow position: chr6:21590907-21590752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 8

Conread position: 33-207
Cow position: chr6:21514403-21514573 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 20

Conread position: 33-353
Cow position: chr6:36189903-36189574 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 148, 28

Conread position: 34-187
Cow position: chr6:66293689-66293538 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 136, 43

Conread position: 34-306
Cow position: chr6:2623969-2623702 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 28

Conread position: 35-207
Cow position: chr6:2153395-2153564 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 153, 42

Conread position: 41-199
Cow position: chr6:58076591-58076436 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 36

Conread position: 48-288
Cow position: chr6:19519569-19519339 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 61

Conread position: 63-203
Cow position: chr6:19508008-19508149 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 63-351
Cow position: chr6:37199358-37199656 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 58

Conread position: 64-167
Cow position: chr6:16764467-16764570 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 64-352
Cow position: chr6:35993762-35993459 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 51

Conread position: 66-354
Cow position: chr6:68049595-68049311 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 21, 114

Conread position: 69-353
Cow position: chr6:54867691-54867393 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 121, 258

Conread position: 78-353
Cow position: chr6:40032355-40032070 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 186

Conread position: 78-354
Cow position: chr6:67323474-67323192 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 110, 193

Conread position: 79-276
Cow position: chr6:16352190-16352397 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 85-346
Cow position: chr6:12845537-12845263 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 66

Conread position: 92-354
Cow position: chr6:60667561-60667293 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 185
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 43

Conread position: 93-350
Cow position: chr6:36470412-36470685 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 233

Conread position: 178-353
Cow position: chr6:59108996-59108818 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 139

Conread position: 204-353
Cow position: chr6:34076049-34075895 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 204-354
Cow position: chr6:58076250-58076100 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 9

Conread position: 204-354
Cow position: chr6:66874372-66874227 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 9

Conread position: 209-354
Cow position: chr6:53731539-53731397 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 210-353
Cow position: chr6:64449407-64449266 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 220-353
Cow position: chr6:38233964-38233837 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 220-354
Cow position: chr6:18968774-18968903 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 221-353
Cow position: chr6:44984335-44984207 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 221-353
Cow position: chr6:50445755-50445886 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 221-353
Cow position: chr6:54492449-54492578 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 221-353
Cow position: chr6:57164433-57164303 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 85

Conread position: 221-354
Cow position: chr6:24515192-24515317 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 222-353
Cow position: chr6:19351150-19351277 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 224-353
Cow position: chr6:416101-415975 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.