Cow genome map
| Conread name: | rcbl_0686.y1 |
| Conread position: | 154-413 |
| Cow position: | chr11:83043136-83043394 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 131, 16 |
| Conread position: | 172-401 |
| Cow position: | chr11:19578804-19579035 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 186-428 |
| Cow position: | chr11:40395644-40395392 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 188-348 |
| Cow position: | chr11:57170406-57170564 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 189-380 |
| Cow position: | chr11:62567026-62566844 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 192-425 |
| Cow position: | chr11:28078688-28078460 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 195-380 |
| Cow position: | chr11:33368265-33368084 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 195-397 |
| Cow position: | chr11:15366781-15366988 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 195-412 |
| Cow position: | chr11:34968416-34968644 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 197-426 |
| Cow position: | chr11:67600970-67600740 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 198-423 |
| Cow position: | chr11:9270545-9270766 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 198-426 |
| Cow position: | chr11:21843946-21844176 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 198-427 |
| Cow position: | chr11:64048583-64048358 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 199-304 |
| Cow position: | chr11:22102565-22102670 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 199-380 |
| Cow position: | chr11:66041464-66041280 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 199-384 |
| Cow position: | chr11:75749658-75749477 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 199-425 |
| Cow position: | chr11:70756666-70756439 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 199-428 |
| Cow position: | chr11:68909661-68909892 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 200-398 |
| Cow position: | chr11:9699064-9699261 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 200-423 |
| Cow position: | chr11:66188130-66188358 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 200-427 |
| Cow position: | chr11:30638761-30638995 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 200-427 |
| Cow position: | chr11:85723885-85723652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 200-428 |
| Cow position: | chr11:30211076-30210863 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 163, 35 |
| Conread position: | 201-301 |
| Cow position: | chr11:51683406-51683307 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 201-355 |
| Cow position: | chr11:59744187-59744033 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-376 |
| Cow position: | chr11:19147951-19148131 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-388 |
| Cow position: | chr11:7571810-7571618 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 201-391 |
| Cow position: | chr11:1485043-1485236 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-394 |
| Cow position: | chr11:1980075-1980280 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 201-394 |
| Cow position: | chr11:77017421-77017229 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 201-396 |
| Cow position: | chr11:45671190-45671385 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 201-398 |
| Cow position: | chr11:41043100-41043295 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 163, 44 |
| Conread position: | 201-402 |
| Cow position: | chr11:46784653-46784454 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 201-406 |
| Cow position: | chr11:43914484-43914267 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 201-425 |
| Cow position: | chr11:52690334-52690563 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-426 |
| Cow position: | chr11:49057574-49057359 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 201-427 |
| Cow position: | chr11:1067248-1067485 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 42 |
| Conread position: | 201-427 |
| Cow position: | chr11:25620200-25620444 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 42 |
| Conread position: | 201-427 |
| Cow position: | chr11:27913476-27913239 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 201-427 |
| Cow position: | chr11:37918858-37919091 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 95, 187 |
| Conread position: | 201-427 |
| Cow position: | chr11:71854091-71854324 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 201-428 |
| Cow position: | chr11:17889537-17889777 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 201-428 |
| Cow position: | chr11:27461921-27462144 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 202-378 |
| Cow position: | chr11:19657026-19657210 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 202-380 |
| Cow position: | chr11:17369715-17369531 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 41 |
| Conread position: | 202-394 |
| Cow position: | chr11:49396337-49396538 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 202-425 |
| Cow position: | chr11:84890542-84890760 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 105, 12 |
| Conread position: | 202-426 |
| Cow position: | chr11:13042959-13043190 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 202-426 |
| Cow position: | chr11:75874583-75874799 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 162, 41 |
| Conread position: | 202-427 |
| Cow position: | chr11:30708694-30708461 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 202-427 |
| Cow position: | chr11:39462809-39462578 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 202-428 |
| Cow position: | chr11:15772524-15772758 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 203-357 |
| Cow position: | chr11:75915174-75915019 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 37 |
| Conread position: | 203-378 |
| Cow position: | chr11:63485121-63484941 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 203-405 |
| Cow position: | chr11:18915197-18915003 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 203-414 |
| Cow position: | chr11:63382009-63382223 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 203-425 |
| Cow position: | chr11:11125854-11125620 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 203-425 |
| Cow position: | chr11:55762044-55761825 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 161, 18 |
| Conread position: | 203-428 |
| Cow position: | chr11:18785708-18785915 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 204-301 |
| Cow position: | chr11:53460885-53460789 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 204-426 |
| Cow position: | chr11:71707992-71707772 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 204-427 |
| Cow position: | chr11:18924935-18924700 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 204-427 |
| Cow position: | chr11:36647515-36647301 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 204-427 |
| Cow position: | chr11:51729462-51729241 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 204-427 |
| Cow position: | chr11:63919879-63920099 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 42 |
| Conread position: | 204-427 |
| Cow position: | chr11:70978548-70978779 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 204-428 |
| Cow position: | chr11:53778807-53778570 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 204-428 |
| Cow position: | chr11:55334106-55333863 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 204-428 |
| Cow position: | chr11:77013958-77013738 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 205-428 |
| Cow position: | chr11:63433879-63434104 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 206-374 |
| Cow position: | chr11:37565054-37564883 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 206-375 |
| Cow position: | chr11:5176196-5176370 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 206-380 |
| Cow position: | chr11:58186057-58185884 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 206-394 |
| Cow position: | chr11:42016454-42016651 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 206-406 |
| Cow position: | chr11:27907955-27907756 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 206-427 |
| Cow position: | chr11:18699055-18698832 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 206-428 |
| Cow position: | chr11:38639284-38639065 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 100, 39 |
| Conread position: | 207-394 |
| Cow position: | chr11:86895556-86895364 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 207-404 |
| Cow position: | chr11:62742464-62742665 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 207-406 |
| Cow position: | chr11:56288729-56288521 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 207-412 |
| Cow position: | chr11:32777856-32777649 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 207-414 |
| Cow position: | chr11:31537264-31537472 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 207-422 |
| Cow position: | chr11:36521064-36520834 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 207-423 |
| Cow position: | chr11:866464-866251 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 156, 36 |
| Conread position: | 207-423 |
| Cow position: | chr11:15467630-15467420 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 207-424 |
| Cow position: | chr11:15369573-15369344 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 207-424 |
| Cow position: | chr11:41985864-41986088 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 207-425 |
| Cow position: | chr11:25791509-25791737 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 207-426 |
| Cow position: | chr11:5433450-5433224 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 207-426 |
| Cow position: | chr11:38334705-38334479 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 207-426 |
| Cow position: | chr11:50472502-50472273 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 207-427 |
| Cow position: | chr11:8584500-8584282 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 207-427 |
| Cow position: | chr11:13592923-13592690 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 207-427 |
| Cow position: | chr11:30172483-30172264 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 207-427 |
| Cow position: | chr11:64029083-64029308 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 207-427 |
| Cow position: | chr11:67911980-67912198 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 207-427 |
| Cow position: | chr11:68913327-68913095 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 207-427 |
| Cow position: | chr11:71934763-71935000 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 207-427 |
| Cow position: | chr11:81167847-81168072 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 89, 35 |
| Conread position: | 207-428 |
| Cow position: | chr11:41133896-41134112 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 35 |
| Conread position: | 208-342 |
| Cow position: | chr11:3267485-3267615 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 208-379 |
| Cow position: | chr11:33374149-33373968 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 208-397 |
| Cow position: | chr11:37099989-37100184 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 208-399 |
| Cow position: | chr11:12555121-12555323 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 208-412 |
| Cow position: | chr11:62789310-62789100 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 74, 35 |
| Conread position: | 208-412 |
| Cow position: | chr11:66939408-66939623 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 208-425 |
| Cow position: | chr11:38236428-38236208 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 208-425 |
| Cow position: | chr11:78380886-78381104 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 78, 35 |
| Conread position: | 208-427 |
| Cow position: | chr11:48512326-48512119 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 208-428 |
| Cow position: | chr11:18447318-18447538 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 35 |
| Conread position: | 209-425 |
| Cow position: | chr11:48660112-48659891 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 211-426 |
| Cow position: | chr11:41313482-41313701 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 32 |
| Conread position: | 211-428 |
| Cow position: | chr11:63435702-63435475 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 214-425 |
| Cow position: | chr11:21852139-21852345 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 153, 28 |
| Conread position: | 214-425 |
| Cow position: | chr11:57503657-57503439 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 214-426 |
| Cow position: | chr11:8988053-8988274 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 214-427 |
| Cow position: | chr11:19247028-19247244 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 29 |
| Conread position: | 214-427 |
| Cow position: | chr11:56311423-56311641 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 82, 28 |
| Conread position: | 214-427 |
| Cow position: | chr11:84385463-84385682 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 214-428 |
| Cow position: | chr11:57608289-57608502 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 216-380 |
| Cow position: | chr11:60720279-60720454 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 220-400 |
| Cow position: | chr11:28993577-28993756 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 222-428 |
| Cow position: | chr11:57873977-57873781 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 225-414 |
| Cow position: | chr11:64409132-64408944 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 229-414 |
| Cow position: | chr11:18508867-18509063 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 232-363 |
| Cow position: | chr11:62535063-62534928 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 232-427 |
| Cow position: | chr11:30370261-30370064 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 239-427 |
| Cow position: | chr11:13500167-13499972 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 59, 91 |
| Conread position: | 240-427 |
| Cow position: | chr11:39250118-39249927 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 88 |
| Conread position: | 241-427 |
| Cow position: | chr11:22977726-22977919 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 243-406 |
| Cow position: | chr11:84764171-84764012 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 52 |
| Conread position: | 243-427 |
| Cow position: | chr11:49934594-49934776 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 246-426 |
| Cow position: | chr11:36112564-36112379 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 246-427 |
| Cow position: | chr11:27565466-27565288 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 246-427 |
| Cow position: | chr11:35669811-35669997 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 246-428 |
| Cow position: | chr11:35536730-35536541 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 247-425 |
| Cow position: | chr11:84977220-84977402 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 275-421 |
| Cow position: | chr11:40478746-40478892 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 276-426 |
| Cow position: | chr11:48063695-48063845 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 290-427 |
| Cow position: | chr11:34106579-34106715 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 32 |
Show alignments to all cow chromosomes.