Cow genome map

Conread name: rcbl_0686.y1

Conread position: 184-348
Cow position: chr18:42967294-42967131 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 60

Conread position: 187-369
Cow position: chr18:18569165-18568990 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 33

Conread position: 189-401
Cow position: chr18:29065205-29065418 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 60

Conread position: 190-412
Cow position: chr18:43951013-43950780 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 54

Conread position: 190-413
Cow position: chr18:12584660-12584886 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 11

Conread position: 190-427
Cow position: chr18:39623988-39623739 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 106, 52

Conread position: 195-423
Cow position: chr18:19868079-19868315 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 47

Conread position: 195-426
Cow position: chr18:39811402-39811642 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 49

Conread position: 195-427
Cow position: chr18:43283578-43283818 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 103, 19

Conread position: 198-428
Cow position: chr18:55499247-55499011 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 46

Conread position: 199-427
Cow position: chr18:38669647-38669872 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 45

Conread position: 199-427
Cow position: chr18:52641956-52642185 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 47

Conread position: 200-406
Cow position: chr18:51405742-51405946 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 40

Conread position: 200-424
Cow position: chr18:32883467-32883249 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 41

Conread position: 200-424
Cow position: chr18:47525566-47525350 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 167, 37

Conread position: 200-425
Cow position: chr18:5766583-5766354 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 43

Conread position: 200-427
Cow position: chr18:24719483-24719252 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 23, 44

Conread position: 200-428
Cow position: chr18:51757268-51757032 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 43

Conread position: 201-363
Cow position: chr18:36098531-36098370 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 41

Conread position: 201-363
Cow position: chr18:50004533-50004701 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 90, 41

Conread position: 201-380
Cow position: chr18:45897900-45897718 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 80, 46

Conread position: 201-385
Cow position: chr18:33492521-33492341 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 42

Conread position: 201-392
Cow position: chr18:17195172-17195373 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 43

Conread position: 201-418
Cow position: chr18:5632438-5632216 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 85, 42

Conread position: 201-423
Cow position: chr18:19193199-19193422 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 42

Conread position: 201-423
Cow position: chr18:35827205-35827430 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 38

Conread position: 201-424
Cow position: chr18:27079040-27078810 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 42

Conread position: 201-425
Cow position: chr18:4668333-4668557 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 42

Conread position: 201-425
Cow position: chr18:20126953-20127165 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 166, 38

Conread position: 201-426
Cow position: chr18:26354868-26355088 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 147, 42

Conread position: 201-427
Cow position: chr18:3180584-3180350 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 43

Conread position: 201-427
Cow position: chr18:3212054-3211817 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 12, 43

Conread position: 201-427
Cow position: chr18:7109305-7109069 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 43

Conread position: 201-427
Cow position: chr18:7965406-7965171 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 42

Conread position: 201-427
Cow position: chr18:25281739-25281953 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 104, 36

Conread position: 201-428
Cow position: chr18:381098-380871 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 95

Conread position: 201-428
Cow position: chr18:22120712-22120947 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 43

Conread position: 202-398
Cow position: chr18:24946253-24946056 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 42

Conread position: 202-423
Cow position: chr18:10214019-10214248 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 41

Conread position: 202-426
Cow position: chr18:52251681-52251917 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 44

Conread position: 202-427
Cow position: chr18:39662953-39662718 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 94, 40

Conread position: 203-399
Cow position: chr18:47868767-47868577 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 95, 40

Conread position: 203-406
Cow position: chr18:9846247-9846450 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 41

Conread position: 203-424
Cow position: chr18:51192577-51192798 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 36

Conread position: 203-426
Cow position: chr18:12059165-12058943 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 40

Conread position: 203-426
Cow position: chr18:47125241-47125460 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 161, 40

Conread position: 203-426
Cow position: chr18:48713713-48713491 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 39

Conread position: 203-427
Cow position: chr18:44909224-44908992 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 41

Conread position: 203-427
Cow position: chr18:50959660-50959425 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 40

Conread position: 203-428
Cow position: chr18:3422858-3422639 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 203-428
Cow position: chr18:38937990-38937760 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 12

Conread position: 204-394
Cow position: chr18:51395723-51395913 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 40

Conread position: 204-399
Cow position: chr18:19809512-19809715 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 40

Conread position: 204-406
Cow position: chr18:4851314-4851519 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 37

Conread position: 204-427
Cow position: chr18:11867509-11867276 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 40

Conread position: 204-427
Cow position: chr18:31672348-31672572 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 75, 39

Conread position: 205-380
Cow position: chr18:39860609-39860785 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 38

Conread position: 205-394
Cow position: chr18:35581885-35582066 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 159, 9

Conread position: 205-400
Cow position: chr18:32243570-32243762 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 39

Conread position: 205-426
Cow position: chr18:1144023-1144243 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 30

Conread position: 205-427
Cow position: chr18:9066870-9066637 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 39

Conread position: 205-428
Cow position: chr18:135491-135716 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 46

Conread position: 206-412
Cow position: chr18:20462539-20462741 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 100, 37

Conread position: 206-418
Cow position: chr18:6075240-6075447 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 100, 79

Conread position: 206-418
Cow position: chr18:18918795-18919010 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 41

Conread position: 206-427
Cow position: chr18:16659260-16659493 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 41

Conread position: 206-427
Cow position: chr18:20270843-20271080 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 39

Conread position: 206-427
Cow position: chr18:56145827-56145611 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 207-411
Cow position: chr18:38211326-38211116 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 36

Conread position: 207-412
Cow position: chr18:14172046-14172254 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 79, 35

Conread position: 207-418
Cow position: chr18:56155683-56155469 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 107, 36

Conread position: 207-426
Cow position: chr18:19849604-19849813 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 157, 36

Conread position: 207-427
Cow position: chr18:50359492-50359270 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 81, 36

Conread position: 207-428
Cow position: chr18:1735431-1735644 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 72, 36

Conread position: 207-428
Cow position: chr18:5078619-5078835 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 6, 36

Conread position: 207-428
Cow position: chr18:14586312-14586532 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 36

Conread position: 207-428
Cow position: chr18:20317896-20318104 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 36

Conread position: 207-428
Cow position: chr18:34813819-34813585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 38

Conread position: 208-426
Cow position: chr18:29091894-29091682 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 208-428
Cow position: chr18:44262789-44262568 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 35

Conread position: 208-428
Cow position: chr18:49100219-49100430 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 156, 35

Conread position: 209-380
Cow position: chr18:10576268-10576097 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 34

Conread position: 209-391
Cow position: chr18:697054-697242 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 99, 34

Conread position: 209-413
Cow position: chr18:42427781-42427573 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 34

Conread position: 209-428
Cow position: chr18:51643205-51643427 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 77, 5

Conread position: 211-386
Cow position: chr18:3066499-3066325 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 33

Conread position: 214-426
Cow position: chr18:4495730-4495946 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 78, 29

Conread position: 214-426
Cow position: chr18:20173977-20174189 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 29

Conread position: 216-426
Cow position: chr18:47417158-47416942 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 27

Conread position: 216-427
Cow position: chr18:24759501-24759717 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 70, 30

Conread position: 219-389
Cow position: chr18:24022770-24022595 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 24

Conread position: 219-423
Cow position: chr18:12273809-12273601 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 24

Conread position: 219-426
Cow position: chr18:5647963-5647753 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 72, 24

Conread position: 219-426
Cow position: chr18:40047349-40047558 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 24

Conread position: 219-428
Cow position: chr18:19296030-19295826 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 219-428
Cow position: chr18:49015271-49015067 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 24

Conread position: 222-424
Cow position: chr18:47565967-47565769 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 22

Conread position: 222-427
Cow position: chr18:35874230-35874019 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 21

Conread position: 225-427
Cow position: chr18:39001665-39001864 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 18

Conread position: 229-418
Cow position: chr18:49655826-49655633 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 14

Conread position: 229-426
Cow position: chr18:51691318-51691522 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 97

Conread position: 242-428
Cow position: chr18:35367069-35367254 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 78

Conread position: 243-427
Cow position: chr18:2774004-2774199 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 256-427
Cow position: chr18:20175075-20175255 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 259-427
Cow position: chr18:17005368-17005199 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 63

Show alignments to all cow chromosomes.