Cow genome map

Conread name: rcbl_0686.y1

Conread position: 188-427
Cow position: chr20:39016607-39016860 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 55

Conread position: 194-425
Cow position: chr20:29845311-29845068 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 48

Conread position: 195-428
Cow position: chr20:19237328-19237092 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 49

Conread position: 198-423
Cow position: chr20:10200603-10200365 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 47

Conread position: 199-393
Cow position: chr20:9033964-9034167 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 47

Conread position: 200-402
Cow position: chr20:7934528-7934324 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 41

Conread position: 200-405
Cow position: chr20:14755593-14755801 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 42

Conread position: 200-412
Cow position: chr20:29755028-29754816 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 122, 43

Conread position: 201-380
Cow position: chr20:22851726-22851540 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 43

Conread position: 201-394
Cow position: chr20:28935393-28935590 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 45

Conread position: 201-394
Cow position: chr20:37273243-37273046 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 43

Conread position: 201-421
Cow position: chr20:6054257-6054488 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 43

Conread position: 201-423
Cow position: chr20:5365178-5364949 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 29

Conread position: 201-423
Cow position: chr20:28249432-28249198 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 42

Conread position: 201-425
Cow position: chr20:14759425-14759648 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 105, 41

Conread position: 201-427
Cow position: chr20:13034084-13034303 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 91, 42

Conread position: 201-427
Cow position: chr20:14433170-14433407 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 43

Conread position: 201-427
Cow position: chr20:24712090-24711855 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 42

Conread position: 201-428
Cow position: chr20:17251969-17251732 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 43

Conread position: 202-375
Cow position: chr20:19919570-19919749 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 41

Conread position: 202-425
Cow position: chr20:1824383-1824613 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 41

Conread position: 202-425
Cow position: chr20:14980259-14980492 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 87, 43

Conread position: 202-427
Cow position: chr20:4755586-4755819 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 41

Conread position: 202-428
Cow position: chr20:14283172-14282934 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 42

Conread position: 203-380
Cow position: chr20:25464798-25464983 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 41

Conread position: 203-428
Cow position: chr20:11101649-11101428 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 40

Conread position: 203-428
Cow position: chr20:21325572-21325340 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 40

Conread position: 204-426
Cow position: chr20:6248352-6248585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 40

Conread position: 204-427
Cow position: chr20:6240273-6240505 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 40

Conread position: 204-427
Cow position: chr20:12581709-12581939 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 40

Conread position: 204-427
Cow position: chr20:14572130-14572350 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 39

Conread position: 204-427
Cow position: chr20:21372542-21372323 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 103, 39

Conread position: 205-379
Cow position: chr20:21018667-21018487 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 38

Conread position: 205-427
Cow position: chr20:3599156-3599380 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 36

Conread position: 205-427
Cow position: chr20:4334293-4334515 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 101, 38

Conread position: 206-399
Cow position: chr20:35442038-35442239 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 8

Conread position: 206-426
Cow position: chr20:35146258-35146037 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 81, 37

Conread position: 207-374
Cow position: chr20:33434916-33435087 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 36

Conread position: 207-394
Cow position: chr20:32636090-32636279 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 36

Conread position: 207-412
Cow position: chr20:14490485-14490279 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 84, 22

Conread position: 207-426
Cow position: chr20:5950397-5950626 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 101, 35

Conread position: 207-426
Cow position: chr20:25953510-25953280 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 35

Conread position: 207-427
Cow position: chr20:4945006-4945236 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 37

Conread position: 207-427
Cow position: chr20:12126058-12126289 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 36

Conread position: 207-428
Cow position: chr20:23540928-23541143 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 37

Conread position: 209-423
Cow position: chr20:14917512-14917304 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 96, 34

Conread position: 209-424
Cow position: chr20:31148392-31148181 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 34

Conread position: 210-427
Cow position: chr20:37919136-37919355 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 22

Conread position: 214-413
Cow position: chr20:11008409-11008199 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 28

Conread position: 219-400
Cow position: chr20:27315207-27315024 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 220-398
Cow position: chr20:31845058-31845241 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 22

Conread position: 221-425
Cow position: chr20:14880015-14879806 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 21

Conread position: 222-427
Cow position: chr20:20967547-20967336 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 21

Conread position: 224-421
Cow position: chr20:9433808-9433608 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 16

Conread position: 225-427
Cow position: chr20:33067134-33067345 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 81, 18

Conread position: 226-427
Cow position: chr20:1139541-1139752 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 17

Conread position: 234-427
Cow position: chr20:10245840-10246038 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 9

Conread position: 240-425
Cow position: chr20:21929105-21928922 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 44

Conread position: 246-424
Cow position: chr20:8429948-8429765 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 169

Conread position: 294-428
Cow position: chr20:36040623-36040488 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 27

Show alignments to all cow chromosomes.