Cow genome map

Conread name: rcbl_0686.y1

Conread position: 84-428
Cow position: chr25:11957122-11956773 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 8

Conread position: 171-427
Cow position: chr25:26224801-26225059 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 75

Conread position: 178-427
Cow position: chr25:12755264-12755517 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 185, 63

Conread position: 187-400
Cow position: chr25:11760244-11760453 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 23

Conread position: 194-417
Cow position: chr25:23519825-23520048 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 14, 54

Conread position: 195-380
Cow position: chr25:17725245-17725061 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 134, 48

Conread position: 195-427
Cow position: chr25:18760503-18760738 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 16

Conread position: 199-412
Cow position: chr25:10585122-10585335 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 43

Conread position: 199-428
Cow position: chr25:6473869-6474118 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 44

Conread position: 200-406
Cow position: chr25:2362030-2361828 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 45

Conread position: 200-427
Cow position: chr25:14513311-14513084 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 104, 43

Conread position: 201-355
Cow position: chr25:13565130-13565280 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 201-378
Cow position: chr25:33100776-33100594 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 42

Conread position: 201-394
Cow position: chr25:36370026-36369822 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 42

Conread position: 201-394
Cow position: chr25:36375717-36375513 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 42

Conread position: 201-396
Cow position: chr25:12223768-12223569 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 42

Conread position: 201-398
Cow position: chr25:28945220-28945019 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 43

Conread position: 201-400
Cow position: chr25:18720924-18721123 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 16

Conread position: 201-405
Cow position: chr25:5808152-5807937 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 42

Conread position: 201-412
Cow position: chr25:12305483-12305261 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 42

Conread position: 201-418
Cow position: chr25:432844-433069 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 38

Conread position: 201-425
Cow position: chr25:17919181-17918946 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 42

Conread position: 201-425
Cow position: chr25:20008339-20008104 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 42

Conread position: 201-426
Cow position: chr25:26089623-26089841 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 38

Conread position: 201-427
Cow position: chr25:26087723-26087489 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 43

Conread position: 201-428
Cow position: chr25:10364149-10364365 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 45

Conread position: 201-428
Cow position: chr25:17474308-17474543 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 43

Conread position: 201-428
Cow position: chr25:24863072-24862844 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 42

Conread position: 201-428
Cow position: chr25:26701224-26700999 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 45

Conread position: 202-406
Cow position: chr25:18201725-18201935 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 38

Conread position: 202-412
Cow position: chr25:22298835-22298622 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 40

Conread position: 203-392
Cow position: chr25:7217018-7216831 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 14

Conread position: 203-394
Cow position: chr25:18551131-18551331 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 111, 40

Conread position: 203-425
Cow position: chr25:16921591-16921825 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 111, 40

Conread position: 203-425
Cow position: chr25:40904627-40904858 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 15

Conread position: 203-427
Cow position: chr25:22731027-22730799 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 40

Conread position: 204-425
Cow position: chr25:7380637-7380867 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 39

Conread position: 204-427
Cow position: chr25:13272770-13272540 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 39

Conread position: 204-427
Cow position: chr25:21893535-21893308 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 38

Conread position: 206-423
Cow position: chr25:9616038-9615811 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 38

Conread position: 207-380
Cow position: chr25:9023943-9023768 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 107, 36

Conread position: 207-380
Cow position: chr25:28662305-28662127 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 36

Conread position: 207-417
Cow position: chr25:33101415-33101625 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 16

Conread position: 207-425
Cow position: chr25:19679549-19679327 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 7

Conread position: 207-427
Cow position: chr25:1763282-1763061 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 36

Conread position: 207-427
Cow position: chr25:35109080-35109299 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 36

Conread position: 208-378
Cow position: chr25:36156009-36155837 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 36

Conread position: 208-412
Cow position: chr25:11436627-11436822 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 157, 34

Conread position: 208-427
Cow position: chr25:35052421-35052653 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 208-428
Cow position: chr25:11780461-11780247 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 35

Conread position: 209-427
Cow position: chr25:30462125-30462335 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 155, 30

Conread position: 211-427
Cow position: chr25:26072369-26072587 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 68, 32

Conread position: 214-425
Cow position: chr25:17658803-17658583 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 59, 29

Conread position: 214-426
Cow position: chr25:33686491-33686713 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 82, 29

Conread position: 214-427
Cow position: chr25:13223088-13222870 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 9

Conread position: 214-427
Cow position: chr25:17403667-17403454 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 29

Conread position: 215-427
Cow position: chr25:24651267-24651483 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 27

Conread position: 218-393
Cow position: chr25:18646767-18646589 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 25

Conread position: 219-411
Cow position: chr25:36835246-36835443 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 24

Conread position: 219-428
Cow position: chr25:9269526-9269317 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 24

Conread position: 220-363
Cow position: chr25:18877419-18877560 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 220-427
Cow position: chr25:6259069-6258853 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 23

Conread position: 243-425
Cow position: chr25:16065045-16064864 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 55, 10

Conread position: 253-426
Cow position: chr25:18988533-18988361 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 63

Conread position: 262-428
Cow position: chr25:4009227-4009062 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 9

Conread position: 297-427
Cow position: chr25:5474131-5474260 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 26

Show alignments to all cow chromosomes.