Cow genome map
Conread name: | rcbl_0686.y1 |
Conread position: | 84-428 |
Cow position: | chr25:11957122-11956773 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 46, 8 |
Conread position: | 171-427 |
Cow position: | chr25:26224801-26225059 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 49, 75 |
Conread position: | 178-427 |
Cow position: | chr25:12755264-12755517 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 179 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 185, 63 |
Conread position: | 187-400 |
Cow position: | chr25:11760244-11760453 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 91, 23 |
Conread position: | 194-417 |
Cow position: | chr25:23519825-23520048 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 14, 54 |
Conread position: | 195-380 |
Cow position: | chr25:17725245-17725061 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 135 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 134, 48 |
Conread position: | 195-427 |
Cow position: | chr25:18760503-18760738 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 104, 16 |
Conread position: | 199-412 |
Cow position: | chr25:10585122-10585335 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 146 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 14, 43 |
Conread position: | 199-428 |
Cow position: | chr25:6473869-6474118 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 22, 44 |
Conread position: | 200-406 |
Cow position: | chr25:2362030-2361828 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 106, 45 |
Conread position: | 200-427 |
Cow position: | chr25:14513311-14513084 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 104, 43 |
Conread position: | 201-355 |
Cow position: | chr25:13565130-13565280 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 201-378 |
Cow position: | chr25:33100776-33100594 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 82, 42 |
Conread position: | 201-394 |
Cow position: | chr25:36370026-36369822 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 15, 42 |
Conread position: | 201-394 |
Cow position: | chr25:36375717-36375513 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 153 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 15, 42 |
Conread position: | 201-396 |
Cow position: | chr25:12223768-12223569 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 155 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 85, 42 |
Conread position: | 201-398 |
Cow position: | chr25:28945220-28945019 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 98, 43 |
Conread position: | 201-400 |
Cow position: | chr25:18720924-18721123 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 96, 16 |
Conread position: | 201-405 |
Cow position: | chr25:5808152-5807937 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 161 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 93, 42 |
Conread position: | 201-412 |
Cow position: | chr25:12305483-12305261 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 159 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 42 |
Conread position: | 201-418 |
Cow position: | chr25:432844-433069 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 163 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 111, 38 |
Conread position: | 201-425 |
Cow position: | chr25:17919181-17918946 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 173 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 95, 42 |
Conread position: | 201-425 |
Cow position: | chr25:20008339-20008104 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 169 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 19, 42 |
Conread position: | 201-426 |
Cow position: | chr25:26089623-26089841 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 166 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 104, 38 |
Conread position: | 201-427 |
Cow position: | chr25:26087723-26087489 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 176 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 12, 43 |
Conread position: | 201-428 |
Cow position: | chr25:10364149-10364365 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 201-428 |
Cow position: | chr25:17474308-17474543 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 170 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 96, 43 |
Conread position: | 201-428 |
Cow position: | chr25:24863072-24862844 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 87, 42 |
Conread position: | 201-428 |
Cow position: | chr25:26701224-26700999 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 158 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 85, 45 |
Conread position: | 202-406 |
Cow position: | chr25:18201725-18201935 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 161 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 11, 38 |
Conread position: | 202-412 |
Cow position: | chr25:22298835-22298622 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 146 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 97, 40 |
Conread position: | 203-392 |
Cow position: | chr25:7217018-7216831 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 136 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 83, 14 |
Conread position: | 203-394 |
Cow position: | chr25:18551131-18551331 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 144 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 111, 40 |
Conread position: | 203-425 |
Cow position: | chr25:16921591-16921825 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 170 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 111, 40 |
Conread position: | 203-425 |
Cow position: | chr25:40904627-40904858 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 111, 15 |
Conread position: | 203-427 |
Cow position: | chr25:22731027-22730799 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 87, 40 |
Conread position: | 204-425 |
Cow position: | chr25:7380637-7380867 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 170 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 88, 39 |
Conread position: | 204-427 |
Cow position: | chr25:13272770-13272540 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 87, 39 |
Conread position: | 204-427 |
Cow position: | chr25:21893535-21893308 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 86, 38 |
Conread position: | 206-423 |
Cow position: | chr25:9616038-9615811 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 164 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 15, 38 |
Conread position: | 207-380 |
Cow position: | chr25:9023943-9023768 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 107, 36 |
Conread position: | 207-380 |
Cow position: | chr25:28662305-28662127 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 79, 36 |
Conread position: | 207-417 |
Cow position: | chr25:33101415-33101625 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 159 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 73, 16 |
Conread position: | 207-425 |
Cow position: | chr25:19679549-19679327 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 156 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 73, 7 |
Conread position: | 207-427 |
Cow position: | chr25:1763282-1763061 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 162 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 79, 36 |
Conread position: | 207-427 |
Cow position: | chr25:35109080-35109299 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 98, 36 |
Conread position: | 208-378 |
Cow position: | chr25:36156009-36155837 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 134 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 14, 36 |
Conread position: | 208-412 |
Cow position: | chr25:11436627-11436822 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 157, 34 |
Conread position: | 208-427 |
Cow position: | chr25:35052421-35052653 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 161 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 208-428 |
Cow position: | chr25:11780461-11780247 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 97, 35 |
Conread position: | 209-427 |
Cow position: | chr25:30462125-30462335 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 155, 30 |
Conread position: | 211-427 |
Cow position: | chr25:26072369-26072587 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 68, 32 |
Conread position: | 214-425 |
Cow position: | chr25:17658803-17658583 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 155 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 59, 29 |
Conread position: | 214-426 |
Cow position: | chr25:33686491-33686713 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 82, 29 |
Conread position: | 214-427 |
Cow position: | chr25:13223088-13222870 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 151 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 86, 9 |
Conread position: | 214-427 |
Cow position: | chr25:17403667-17403454 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 154 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 75, 29 |
Conread position: | 215-427 |
Cow position: | chr25:24651267-24651483 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 115, 27 |
Conread position: | 218-393 |
Cow position: | chr25:18646767-18646589 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 138 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 73, 25 |
Conread position: | 219-411 |
Cow position: | chr25:36835246-36835443 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 137 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 67, 24 |
Conread position: | 219-428 |
Cow position: | chr25:9269526-9269317 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 75, 24 |
Conread position: | 220-363 |
Cow position: | chr25:18877419-18877560 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 220-427 |
Cow position: | chr25:6259069-6258853 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 74, 23 |
Conread position: | 243-425 |
Cow position: | chr25:16065045-16064864 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 145 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 55, 10 |
Conread position: | 253-426 |
Cow position: | chr25:18988533-18988361 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 123 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 113, 63 |
Conread position: | 262-428 |
Cow position: | chr25:4009227-4009062 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 124 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 297-427 |
Cow position: | chr25:5474131-5474260 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 70, 26 |
Show alignments to all cow chromosomes.