Cow genome map
| Conread name: | rcbl_0686.y1 |
| Conread position: | 172-424 |
| Cow position: | chr26:4854797-4854537 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 188-428 |
| Cow position: | chr26:25663311-25663557 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 189-411 |
| Cow position: | chr26:34314914-34314696 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 192-361 |
| Cow position: | chr26:28602-28775 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 192-427 |
| Cow position: | chr26:7148069-7148316 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 192-427 |
| Cow position: | chr26:33074264-33074507 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 199-403 |
| Cow position: | chr26:23481026-23481237 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 199-422 |
| Cow position: | chr26:10974354-10974125 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 199-428 |
| Cow position: | chr26:14905591-14905820 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 200-388 |
| Cow position: | chr26:13018179-13018361 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 43 |
| Conread position: | 200-427 |
| Cow position: | chr26:6714075-6714311 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 200-428 |
| Cow position: | chr26:22249266-22249489 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 169, 43 |
| Conread position: | 201-332 |
| Cow position: | chr26:15908538-15908667 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 201-380 |
| Cow position: | chr26:3192224-3192407 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 201-413 |
| Cow position: | chr26:33456305-33456517 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 201-418 |
| Cow position: | chr26:18381525-18381312 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 201-419 |
| Cow position: | chr26:19146126-19145899 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 201-424 |
| Cow position: | chr26:7224130-7224350 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-425 |
| Cow position: | chr26:2701763-2701993 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 14 |
| Conread position: | 201-425 |
| Cow position: | chr26:12893206-12893436 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 201-425 |
| Cow position: | chr26:21636829-21637046 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 163, 40 |
| Conread position: | 201-425 |
| Cow position: | chr26:35704596-35704379 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 163, 42 |
| Conread position: | 201-426 |
| Cow position: | chr26:19459919-19459683 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 127 |
| Conread position: | 201-426 |
| Cow position: | chr26:19591701-19591473 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 201-427 |
| Cow position: | chr26:4807781-4807548 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-427 |
| Cow position: | chr26:6794369-6794134 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 201-428 |
| Cow position: | chr26:9099310-9099543 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 12, 50 |
| Conread position: | 201-428 |
| Cow position: | chr26:33253094-33253329 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 202-404 |
| Cow position: | chr26:34060557-34060345 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 202-405 |
| Cow position: | chr26:14293371-14293161 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 123 |
| Conread position: | 202-425 |
| Cow position: | chr26:34026811-34027044 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 202-427 |
| Cow position: | chr26:25526468-25526238 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 84, 43 |
| Conread position: | 202-427 |
| Cow position: | chr26:35449278-35449052 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 203-363 |
| Cow position: | chr26:17554399-17554562 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 132 |
| Conread position: | 203-380 |
| Cow position: | chr26:21822826-21823009 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 203-428 |
| Cow position: | chr26:798087-798308 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 148, 40 |
| Conread position: | 204-406 |
| Cow position: | chr26:16795992-16796196 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 16, 40 |
| Conread position: | 204-427 |
| Cow position: | chr26:17057894-17057667 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 204-427 |
| Cow position: | chr26:20291473-20291702 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 205-375 |
| Cow position: | chr26:31382533-31382361 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 205-426 |
| Cow position: | chr26:4584993-4585220 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 101, 38 |
| Conread position: | 206-377 |
| Cow position: | chr26:1041220-1041038 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 206-380 |
| Cow position: | chr26:12807088-12807264 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 206-394 |
| Cow position: | chr26:35678066-35677875 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 206-427 |
| Cow position: | chr26:20260799-20260577 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 207-364 |
| Cow position: | chr26:25737662-25737504 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 207-426 |
| Cow position: | chr26:586656-586888 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 207-427 |
| Cow position: | chr26:9604772-9604551 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 207-427 |
| Cow position: | chr26:10764431-10764201 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 207-427 |
| Cow position: | chr26:21243303-21243091 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 207-428 |
| Cow position: | chr26:21418236-21418465 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 207-428 |
| Cow position: | chr26:28247065-28246829 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 208-403 |
| Cow position: | chr26:32981255-32981461 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 208-423 |
| Cow position: | chr26:3758002-3757782 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 208-428 |
| Cow position: | chr26:32830299-32830069 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 209-427 |
| Cow position: | chr26:11672515-11672286 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 211-417 |
| Cow position: | chr26:19671690-19671477 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 214-427 |
| Cow position: | chr26:2986881-2987090 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 31 |
| Conread position: | 214-427 |
| Cow position: | chr26:23623834-23624055 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 218-423 |
| Cow position: | chr26:27304611-27304409 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 219-427 |
| Cow position: | chr26:29889310-29889522 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 222-406 |
| Cow position: | chr26:32563551-32563359 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 222-426 |
| Cow position: | chr26:5168594-5168388 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 241-423 |
| Cow position: | chr26:1325930-1325750 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 44 |
| Conread position: | 276-428 |
| Cow position: | chr26:6865165-6865012 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 49 |
Show alignments to all cow chromosomes.