Cow genome map

Conread name: rcbl_0686.y1

Conread position: 189-426
Cow position: chr27:26121495-26121743 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 55

Conread position: 194-428
Cow position: chr27:26437378-26437136 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 50

Conread position: 195-428
Cow position: chr27:20354344-20354575 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 37

Conread position: 198-363
Cow position: chr27:28190445-28190282 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 46

Conread position: 198-428
Cow position: chr27:6924828-6925070 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 50

Conread position: 199-398
Cow position: chr27:26565543-26565743 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 43

Conread position: 199-417
Cow position: chr27:9560959-9561176 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 98

Conread position: 199-423
Cow position: chr27:27442413-27442189 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 45

Conread position: 200-406
Cow position: chr27:20548559-20548774 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 40

Conread position: 201-392
Cow position: chr27:23128216-23128409 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 13

Conread position: 201-394
Cow position: chr27:26236080-26236277 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 15

Conread position: 201-398
Cow position: chr27:4414065-4413863 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 80, 20

Conread position: 201-410
Cow position: chr27:6162653-6162443 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 42

Conread position: 201-411
Cow position: chr27:4411941-4411743 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 201-412
Cow position: chr27:15332539-15332326 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 17, 43

Conread position: 201-423
Cow position: chr27:12425038-12425270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 93, 42

Conread position: 201-427
Cow position: chr27:8062603-8062365 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 44

Conread position: 201-427
Cow position: chr27:11435576-11435338 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 113, 16

Conread position: 201-427
Cow position: chr27:14269581-14269359 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 146

Conread position: 201-427
Cow position: chr27:30890051-30890274 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 41

Conread position: 202-392
Cow position: chr27:31248855-31248664 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 41

Conread position: 202-426
Cow position: chr27:426721-426952 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 83, 52

Conread position: 202-427
Cow position: chr27:15867143-15867380 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 41

Conread position: 202-427
Cow position: chr27:29319155-29319395 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 43

Conread position: 202-428
Cow position: chr27:11982897-11982661 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 41

Conread position: 203-375
Cow position: chr27:14343684-14343516 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 39

Conread position: 203-425
Cow position: chr27:26112166-26111932 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 40

Conread position: 203-428
Cow position: chr27:4944754-4944529 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 40

Conread position: 204-377
Cow position: chr27:11145635-11145814 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 39

Conread position: 204-394
Cow position: chr27:1184420-1184226 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 40

Conread position: 204-401
Cow position: chr27:19741638-19741450 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 160, 39

Conread position: 204-406
Cow position: chr27:22547635-22547436 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 38

Conread position: 204-406
Cow position: chr27:23527068-23527276 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 72, 38

Conread position: 204-427
Cow position: chr27:18435377-18435148 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 39

Conread position: 205-406
Cow position: chr27:7412148-7412356 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 9

Conread position: 205-413
Cow position: chr27:16705007-16705221 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 40

Conread position: 205-427
Cow position: chr27:18882410-18882635 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 36

Conread position: 205-427
Cow position: chr27:22245396-22245610 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 102, 12

Conread position: 206-391
Cow position: chr27:11349041-11349224 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 11

Conread position: 206-410
Cow position: chr27:28932047-28931834 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 37

Conread position: 206-425
Cow position: chr27:31386875-31386648 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 82, 36

Conread position: 206-427
Cow position: chr27:20749247-20749031 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 89, 37

Conread position: 207-387
Cow position: chr27:20048392-20048578 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 37

Conread position: 207-412
Cow position: chr27:16786587-16786798 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 36

Conread position: 207-424
Cow position: chr27:22614611-22614822 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 156, 36

Conread position: 207-427
Cow position: chr27:15315279-15315501 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 36

Conread position: 207-427
Cow position: chr27:18543744-18543976 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 35

Conread position: 207-427
Cow position: chr27:26794028-26793799 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 36

Conread position: 207-427
Cow position: chr27:31151140-31151365 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 20

Conread position: 208-425
Cow position: chr27:28002047-28001830 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 36

Conread position: 208-427
Cow position: chr27:30455750-30455978 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 35

Conread position: 208-428
Cow position: chr27:1637169-1636950 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 87, 35

Conread position: 208-428
Cow position: chr27:27740536-27740306 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 106, 35

Conread position: 208-428
Cow position: chr27:31373215-31372998 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 37

Conread position: 209-424
Cow position: chr27:18558116-18558338 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 33

Conread position: 211-405
Cow position: chr27:17102660-17102858 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 35

Conread position: 214-412
Cow position: chr27:15865373-15865576 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 31

Conread position: 214-427
Cow position: chr27:10323607-10323821 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 29

Conread position: 215-427
Cow position: chr27:30764797-30765015 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 100, 28

Conread position: 217-425
Cow position: chr27:6319688-6319901 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 27

Conread position: 218-427
Cow position: chr27:21393726-21393522 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 89, 25

Conread position: 219-427
Cow position: chr27:2592305-2592527 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 24

Conread position: 220-392
Cow position: chr27:26909819-26909641 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 23

Conread position: 220-423
Cow position: chr27:23554560-23554349 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 23

Conread position: 220-425
Cow position: chr27:26490136-26489926 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 23

Conread position: 222-412
Cow position: chr27:26226517-26226321 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 21

Conread position: 225-398
Cow position: chr27:24755765-24755943 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 18

Conread position: 235-426
Cow position: chr27:17646373-17646185 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 8

Conread position: 246-426
Cow position: chr27:20812709-20812888 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 48

Conread position: 248-426
Cow position: chr27:15866015-15866200 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 138

Conread position: 275-428
Cow position: chr27:27641178-27641027 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 45

Show alignments to all cow chromosomes.