Cow genome map

Conread name: rcbl_0686.y1

Conread position: 164-428
Cow position: chr28:11866418-11866689 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 6, 81

Conread position: 189-398
Cow position: chr28:14242920-14242699 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 54

Conread position: 190-417
Cow position: chr28:10615728-10615959 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 49

Conread position: 190-427
Cow position: chr28:10298061-10297833 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 50

Conread position: 191-406
Cow position: chr28:23531084-23530872 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 105, 48

Conread position: 192-413
Cow position: chr28:16214665-16214882 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 51

Conread position: 192-414
Cow position: chr28:6563674-6563908 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 50

Conread position: 195-380
Cow position: chr28:7964459-7964654 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 50

Conread position: 195-398
Cow position: chr28:117540-117757 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 49

Conread position: 195-422
Cow position: chr28:27218543-27218305 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 49

Conread position: 195-427
Cow position: chr28:20174055-20173813 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 48

Conread position: 196-397
Cow position: chr28:20046759-20046560 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 48

Conread position: 199-422
Cow position: chr28:12951628-12951405 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 15

Conread position: 199-425
Cow position: chr28:9426138-9426371 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 21, 45

Conread position: 199-427
Cow position: chr28:7008768-7009001 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 43

Conread position: 199-427
Cow position: chr28:10845316-10845083 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 45

Conread position: 199-427
Cow position: chr28:22133122-22132888 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 45

Conread position: 200-363
Cow position: chr28:26960701-26960867 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 43

Conread position: 200-406
Cow position: chr28:5674084-5673873 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 43

Conread position: 200-425
Cow position: chr28:19217025-19216800 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 44

Conread position: 200-427
Cow position: chr28:5827143-5826927 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 45

Conread position: 201-363
Cow position: chr28:6301296-6301123 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 40

Conread position: 201-375
Cow position: chr28:118826-118638 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 43

Conread position: 201-375
Cow position: chr28:5609707-5609888 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 44

Conread position: 201-380
Cow position: chr28:3678570-3678386 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 41

Conread position: 201-380
Cow position: chr28:10959010-10958826 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 40

Conread position: 201-393
Cow position: chr28:13269929-13269742 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 41

Conread position: 201-400
Cow position: chr28:27445364-27445568 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 42

Conread position: 201-402
Cow position: chr28:22630222-22630014 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 131

Conread position: 201-406
Cow position: chr28:30302996-30303202 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 46

Conread position: 201-421
Cow position: chr28:3143674-3143892 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 42

Conread position: 201-424
Cow position: chr28:19015913-19015696 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 39

Conread position: 201-425
Cow position: chr28:3725997-3726232 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 129

Conread position: 201-425
Cow position: chr28:5818050-5817819 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 43

Conread position: 201-425
Cow position: chr28:9100140-9099915 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 29

Conread position: 201-425
Cow position: chr28:21008460-21008686 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 42

Conread position: 201-426
Cow position: chr28:3449521-3449281 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 42

Conread position: 201-427
Cow position: chr28:5630311-5630075 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 12, 42

Conread position: 201-427
Cow position: chr28:10606427-10606648 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 85, 41

Conread position: 201-427
Cow position: chr28:16085530-16085302 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 27, 59

Conread position: 201-427
Cow position: chr28:23724258-23724485 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 41

Conread position: 202-404
Cow position: chr28:21207167-21207368 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 104, 39

Conread position: 202-413
Cow position: chr28:15362789-15362570 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 42

Conread position: 202-426
Cow position: chr28:16918964-16919191 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 41

Conread position: 202-428
Cow position: chr28:4013293-4013060 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 81, 41

Conread position: 203-423
Cow position: chr28:23410125-23410344 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 40

Conread position: 204-411
Cow position: chr28:29416517-29416723 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 39

Conread position: 204-418
Cow position: chr28:17727903-17728113 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 16, 42

Conread position: 204-426
Cow position: chr28:5931553-5931334 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 41

Conread position: 204-427
Cow position: chr28:26719538-26719320 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 39

Conread position: 204-428
Cow position: chr28:3011058-3011293 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 40

Conread position: 205-413
Cow position: chr28:19038810-19039028 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 39

Conread position: 205-427
Cow position: chr28:11346282-11346510 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 38

Conread position: 205-427
Cow position: chr28:17680832-17680599 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 42

Conread position: 205-427
Cow position: chr28:21046382-21046598 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 160, 38

Conread position: 206-384
Cow position: chr28:22085340-22085522 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 8

Conread position: 206-389
Cow position: chr28:3423983-3423792 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 36

Conread position: 206-406
Cow position: chr28:11411333-11411538 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 85, 37

Conread position: 206-412
Cow position: chr28:5232146-5231930 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 39

Conread position: 206-418
Cow position: chr28:32366024-32365830 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 35

Conread position: 206-421
Cow position: chr28:17012099-17012311 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 71, 33

Conread position: 206-424
Cow position: chr28:5236080-5235862 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 40

Conread position: 206-426
Cow position: chr28:11814873-11815100 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 37

Conread position: 207-374
Cow position: chr28:21744917-21744745 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 36

Conread position: 207-420
Cow position: chr28:24996413-24996629 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 117

Conread position: 207-424
Cow position: chr28:34230436-34230208 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 33

Conread position: 207-427
Cow position: chr28:11059696-11059478 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 154, 36

Conread position: 207-428
Cow position: chr28:4937034-4937266 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 35

Conread position: 208-425
Cow position: chr28:19262380-19262606 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 35

Conread position: 209-353
Cow position: chr28:21263357-21263209 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 36

Conread position: 209-427
Cow position: chr28:4186106-4185884 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 33

Conread position: 214-400
Cow position: chr28:19994748-19994942 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 29

Conread position: 214-426
Cow position: chr28:27721894-27721681 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 76, 29

Conread position: 217-395
Cow position: chr28:26530672-26530857 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 25

Conread position: 219-427
Cow position: chr28:24343546-24343349 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 23

Conread position: 219-428
Cow position: chr28:1099484-1099684 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 24

Conread position: 220-404
Cow position: chr28:11451313-11451492 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 144, 23

Conread position: 220-428
Cow position: chr28:25400059-25399849 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 109

Conread position: 222-424
Cow position: chr28:20397176-20397390 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 225-424
Cow position: chr28:555683-555484 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 17

Conread position: 226-416
Cow position: chr28:10888810-10888624 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 138, 17

Conread position: 232-418
Cow position: chr28:9384111-9384301 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 11

Conread position: 243-375
Cow position: chr28:20281923-20281787 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 80

Conread position: 243-427
Cow position: chr28:4881073-4881262 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 86

Conread position: 244-427
Cow position: chr28:3408053-3408241 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 83

Conread position: 247-427
Cow position: chr28:2819938-2819752 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 275-427
Cow position: chr28:27161198-27161349 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 46

Conread position: 294-427
Cow position: chr28:21355341-21355209 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 27

Show alignments to all cow chromosomes.