Cow genome map
| Conread name: | rcbl_0686.y1 |
| Conread position: | 136-424 |
| Cow position: | chr3:1011742-1011437 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 157-426 |
| Cow position: | chr3:5365890-5365626 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 210, 12 |
| Conread position: | 178-427 |
| Cow position: | chr3:59391919-59392170 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 182-427 |
| Cow position: | chr3:65058900-65058648 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 188-412 |
| Cow position: | chr3:58452241-58452011 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 189-363 |
| Cow position: | chr3:59699455-59699638 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 190-427 |
| Cow position: | chr3:40212842-40213085 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 192-424 |
| Cow position: | chr3:55318707-55318949 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 192-426 |
| Cow position: | chr3:68587211-68586972 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 193-376 |
| Cow position: | chr3:31804580-31804757 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 194-426 |
| Cow position: | chr3:43233693-43233455 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 195-424 |
| Cow position: | chr3:15051763-15051997 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 195-427 |
| Cow position: | chr3:26904286-26904058 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 5 |
| Conread position: | 198-428 |
| Cow position: | chr3:55712617-55712387 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 199-406 |
| Cow position: | chr3:44960129-44959911 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 199-407 |
| Cow position: | chr3:59317885-59317670 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 199-426 |
| Cow position: | chr3:1517329-1517563 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 199-426 |
| Cow position: | chr3:79271525-79271763 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 200-315 |
| Cow position: | chr3:47735404-47735289 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 200-394 |
| Cow position: | chr3:8526196-8526383 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 200-407 |
| Cow position: | chr3:77276282-77276490 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 200-425 |
| Cow position: | chr3:70333786-70334014 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 42 |
| Conread position: | 200-426 |
| Cow position: | chr3:3883637-3883866 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 200-427 |
| Cow position: | chr3:75050440-75050669 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 200-427 |
| Cow position: | chr3:76172499-76172720 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 201-330 |
| Cow position: | chr3:40794536-40794667 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 201-374 |
| Cow position: | chr3:73513881-73514047 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 163, 39 |
| Conread position: | 201-375 |
| Cow position: | chr3:2016614-2016435 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 201-379 |
| Cow position: | chr3:59597355-59597174 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 201-380 |
| Cow position: | chr3:15859199-15859384 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 201-388 |
| Cow position: | chr3:23640521-23640330 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 41 |
| Conread position: | 201-394 |
| Cow position: | chr3:50350796-50350988 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 201-398 |
| Cow position: | chr3:12669321-12669113 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 201-399 |
| Cow position: | chr3:27246785-27246983 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 201-400 |
| Cow position: | chr3:18831601-18831396 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 201-400 |
| Cow position: | chr3:76056106-76056310 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 201-405 |
| Cow position: | chr3:42967210-42967408 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 163, 41 |
| Conread position: | 201-406 |
| Cow position: | chr3:5703358-5703147 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 97, 46 |
| Conread position: | 201-406 |
| Cow position: | chr3:28902580-28902790 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 41 |
| Conread position: | 201-412 |
| Cow position: | chr3:15973752-15973529 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 201-413 |
| Cow position: | chr3:48253061-48252847 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 201-414 |
| Cow position: | chr3:78071610-78071831 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 201-421 |
| Cow position: | chr3:11229189-11229411 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 38 |
| Conread position: | 201-423 |
| Cow position: | chr3:71238333-71238106 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 201-424 |
| Cow position: | chr3:73764033-73764243 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 201-424 |
| Cow position: | chr3:75777887-75778111 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 201-425 |
| Cow position: | chr3:23804684-23804466 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 201-426 |
| Cow position: | chr3:30180266-30180034 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 201-426 |
| Cow position: | chr3:45211487-45211250 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 201-426 |
| Cow position: | chr3:48900148-48900383 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 201-426 |
| Cow position: | chr3:53904628-53904406 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 90 |
| Conread position: | 201-426 |
| Cow position: | chr3:58527559-58527336 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 201-427 |
| Cow position: | chr3:210505-210267 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 15, 43 |
| Conread position: | 201-427 |
| Cow position: | chr3:64280756-64280983 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 201-427 |
| Cow position: | chr3:83491262-83491034 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 87, 42 |
| Conread position: | 201-428 |
| Cow position: | chr3:48241789-48241566 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 202-372 |
| Cow position: | chr3:22094432-22094596 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 202-399 |
| Cow position: | chr3:75966601-75966805 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 202-412 |
| Cow position: | chr3:68707841-68708045 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 105, 45 |
| Conread position: | 202-412 |
| Cow position: | chr3:68880950-68881153 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 202-425 |
| Cow position: | chr3:20841698-20841923 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 202-425 |
| Cow position: | chr3:25477973-25477756 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 202-426 |
| Cow position: | chr3:3032590-3032358 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 202-426 |
| Cow position: | chr3:23471282-23471510 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 202-427 |
| Cow position: | chr3:15153870-15153640 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 202-427 |
| Cow position: | chr3:34871749-34871515 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 106, 41 |
| Conread position: | 202-427 |
| Cow position: | chr3:81234569-81234337 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 202-428 |
| Cow position: | chr3:3889396-3889620 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 202-428 |
| Cow position: | chr3:67519995-67520222 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 203-394 |
| Cow position: | chr3:59681727-59681923 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 203-397 |
| Cow position: | chr3:31115098-31115292 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 203-413 |
| Cow position: | chr3:58764906-58765113 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 203-422 |
| Cow position: | chr3:5374489-5374285 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 203-424 |
| Cow position: | chr3:59474300-59474073 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 203-425 |
| Cow position: | chr3:76267794-76268025 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 203-426 |
| Cow position: | chr3:2518361-2518590 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 203-426 |
| Cow position: | chr3:30357689-30357470 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 161, 40 |
| Conread position: | 203-427 |
| Cow position: | chr3:55819929-55819707 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 40 |
| Conread position: | 203-428 |
| Cow position: | chr3:74644739-74644504 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 204-379 |
| Cow position: | chr3:56583027-56582844 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 204-408 |
| Cow position: | chr3:19711158-19711372 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 204-423 |
| Cow position: | chr3:18687080-18686858 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 204-426 |
| Cow position: | chr3:11987506-11987278 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 204-427 |
| Cow position: | chr3:22221505-22221276 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 204-428 |
| Cow position: | chr3:2506297-2506533 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 205-348 |
| Cow position: | chr3:43527616-43527756 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 101, 37 |
| Conread position: | 205-362 |
| Cow position: | chr3:49787734-49787572 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 205-406 |
| Cow position: | chr3:76138637-76138440 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 158, 40 |
| Conread position: | 205-418 |
| Cow position: | chr3:82366307-82366086 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 38 |
| Conread position: | 205-427 |
| Cow position: | chr3:54435147-54434925 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 39 |
| Conread position: | 205-428 |
| Cow position: | chr3:51233926-51234147 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 206-412 |
| Cow position: | chr3:45667166-45667383 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 206-423 |
| Cow position: | chr3:15443549-15443776 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 206-425 |
| Cow position: | chr3:55970691-55970457 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 206-427 |
| Cow position: | chr3:13329616-13329825 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 8 |
| Conread position: | 206-427 |
| Cow position: | chr3:44102143-44101916 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 206-428 |
| Cow position: | chr3:52651903-52652134 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 207-301 |
| Cow position: | chr3:635354-635262 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 207-394 |
| Cow position: | chr3:986191-985995 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 207-394 |
| Cow position: | chr3:43388949-43389147 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 207-394 |
| Cow position: | chr3:58101851-58101660 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 207-394 |
| Cow position: | chr3:70402814-70402625 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 207-398 |
| Cow position: | chr3:53604568-53604769 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 207-421 |
| Cow position: | chr3:3698820-3698613 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 36 |
| Conread position: | 207-423 |
| Cow position: | chr3:17456091-17456316 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 207-424 |
| Cow position: | chr3:31555110-31554900 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 36 |
| Conread position: | 207-425 |
| Cow position: | chr3:17134507-17134284 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 207-425 |
| Cow position: | chr3:31309178-31309404 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 207-426 |
| Cow position: | chr3:33252716-33252940 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 207-427 |
| Cow position: | chr3:15228665-15228875 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 207-427 |
| Cow position: | chr3:18459361-18459579 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 207-427 |
| Cow position: | chr3:21866862-21867090 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 36 |
| Conread position: | 207-427 |
| Cow position: | chr3:23920250-23920481 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 207-427 |
| Cow position: | chr3:35055800-35056030 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 207-427 |
| Cow position: | chr3:75853159-75853377 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 207-427 |
| Cow position: | chr3:79272400-79272626 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 36 |
| Conread position: | 207-428 |
| Cow position: | chr3:14553048-14552822 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 208-418 |
| Cow position: | chr3:72027814-72027591 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 208-424 |
| Cow position: | chr3:28908041-28908252 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 208-424 |
| Cow position: | chr3:55177576-55177795 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 208-427 |
| Cow position: | chr3:56948921-56949140 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 208-428 |
| Cow position: | chr3:17936672-17936892 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 209-403 |
| Cow position: | chr3:15160691-15160492 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 209-425 |
| Cow position: | chr3:35153780-35153567 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 209-427 |
| Cow position: | chr3:20802466-20802672 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 209-427 |
| Cow position: | chr3:53271007-53270778 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 211-423 |
| Cow position: | chr3:60597709-60597496 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 211-427 |
| Cow position: | chr3:14547171-14546950 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 212-379 |
| Cow position: | chr3:31489877-31489716 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 214-390 |
| Cow position: | chr3:27286684-27286503 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 214-412 |
| Cow position: | chr3:30463007-30463208 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 28 |
| Conread position: | 214-427 |
| Cow position: | chr3:10668710-10668931 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 214-427 |
| Cow position: | chr3:75608657-75608448 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 215-412 |
| Cow position: | chr3:57577864-57577660 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 28 |
| Conread position: | 216-378 |
| Cow position: | chr3:83934891-83934722 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 216-428 |
| Cow position: | chr3:39996726-39996944 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 75, 28 |
| Conread position: | 218-427 |
| Cow position: | chr3:18393237-18393446 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 219-425 |
| Cow position: | chr3:59000599-59000802 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 220-427 |
| Cow position: | chr3:19793427-19793642 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 221-423 |
| Cow position: | chr3:13380116-13380323 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 221-427 |
| Cow position: | chr3:7566259-7566469 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 225-427 |
| Cow position: | chr3:39988094-39988288 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 200, 18 |
| Conread position: | 229-426 |
| Cow position: | chr3:83846049-83845865 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 231-427 |
| Cow position: | chr3:76931964-76932155 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 232-426 |
| Cow position: | chr3:27976371-27976575 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 246-412 |
| Cow position: | chr3:26982196-26982021 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 248-427 |
| Cow position: | chr3:48810518-48810697 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 248-427 |
| Cow position: | chr3:69650753-69650941 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 82 |
| Conread position: | 256-426 |
| Cow position: | chr3:53739066-53739236 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 275-425 |
| Cow position: | chr3:17934837-17934988 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 294-426 |
| Cow position: | chr3:11292167-11292299 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 297-427 |
| Cow position: | chr3:57760575-57760446 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 298-427 |
| Cow position: | chr3:81277391-81277520 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 25 |
Show alignments to all cow chromosomes.