Non-Coding RNA Search

Cow genome map


           Conread name:
           rche01_o13.y1
        

               Conread position:
               274-493
               

               Cow position:
               chr1:95637689-95637904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               281-538
               

               Cow position:
               chr1:89349820-89350083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               283-603
               

               Cow position:
               chr1:10778426-10778755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               286-563
               

               Cow position:
               chr1:98511792-98512072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               290-579
               

               Cow position:
               chr1:100400326-100400030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 201
               

               Conread position:
               291-538
               

               Cow position:
               chr1:84255635-84255885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               291-607
               

               Cow position:
               chr1:56477460-56477790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               295-533
               

               Cow position:
               chr1:100393288-100393050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               295-591
               

               Cow position:
               chr1:77720362-77720071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 100
               

               Conread position:
               296-603
               

               Cow position:
               chr1:19465932-19466237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 95
               

               Conread position:
               297-538
               

               Cow position:
               chr1:39510172-39509940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               298-538
               

               Cow position:
               chr1:101834702-101834933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               220, 43
               

               Conread position:
               298-544
               

               Cow position:
               chr1:82337903-82337656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               74, 150
               

               Conread position:
               298-607
               

               Cow position:
               chr1:59518797-59519116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               300-607
               

               Cow position:
               chr1:71295429-71295099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 305
               

               Conread position:
               301-519
               

               Cow position:
               chr1:20204907-20205126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 168
               

               Conread position:
               301-525
               

               Cow position:
               chr1:62291811-62291596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               301-531
               

               Cow position:
               chr1:85647902-85647671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               14, 96
               

               Conread position:
               301-533
               

               Cow position:
               chr1:41056563-41056791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               140, 59
               

               Conread position:
               301-538
               

               Cow position:
               chr1:55357406-55357177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               301-539
               

               Cow position:
               chr1:724617-724859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               301-540
               

               Cow position:
               chr1:64251172-64250932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               301-544
               

               Cow position:
               chr1:51394301-51394543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               301-545
               

               Cow position:
               chr1:62964158-62964391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               301-607
               

               Cow position:
               chr1:14206276-14205959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 86
               

               Conread position:
               301-607
               

               Cow position:
               chr1:91066273-91065952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               301-607
               

               Cow position:
               chr1:95176819-95177123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               301-607
               

               Cow position:
               chr1:96365546-96365854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               68, 43
               

               Conread position:
               301-608
               

               Cow position:
               chr1:70380266-70379960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               302-502
               

               Cow position:
               chr1:19568731-19568931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 102
               

               Conread position:
               304-551
               

               Cow position:
               chr1:75249999-75250241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               307-538
               

               Cow position:
               chr1:3790179-3789952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 77
               

               Conread position:
               307-538
               

               Cow position:
               chr1:72068952-72068716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               307-540
               

               Cow position:
               chr1:3167182-3166954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               147, 53
               

               Conread position:
               307-584
               

               Cow position:
               chr1:37886923-37886648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 137
               

               Conread position:
               307-605
               

               Cow position:
               chr1:42175611-42175931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               67, 88
               

               Conread position:
               307-607
               

               Cow position:
               chr1:54478211-54478521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               307-607
               

               Cow position:
               chr1:64572400-64572719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               67, 79
               

               Conread position:
               307-608
               

               Cow position:
               chr1:86110844-86110539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 81
               

               Conread position:
               308-514
               

               Cow position:
               chr1:85774348-85774550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               308-538
               

               Cow position:
               chr1:41047414-41047185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               308-570
               

               Cow position:
               chr1:4291048-4291319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               309-464
               

               Cow position:
               chr1:58439112-58438956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               309-500
               

               Cow position:
               chr1:3429621-3429430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               309-502
               

               Cow position:
               chr1:648213-648406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               309-512
               

               Cow position:
               chr1:4374451-4374246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 92
               

               Conread position:
               309-538
               

               Cow position:
               chr1:72813502-72813734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               6, 116
               

               Conread position:
               309-538
               

               Cow position:
               chr1:81580064-81580295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               309-543
               

               Cow position:
               chr1:24581470-24581699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               309-580
               

               Cow position:
               chr1:100761964-100762249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 82
               

               Conread position:
               310-450
               

               Cow position:
               chr1:1403591-1403452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               310-498
               

               Cow position:
               chr1:87440356-87440544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               310-503
               

               Cow position:
               chr1:85596831-85597020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 134
               

               Conread position:
               310-516
               

               Cow position:
               chr1:8374562-8374359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               310-527
               

               Cow position:
               chr1:81355818-81355596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               310-531
               

               Cow position:
               chr1:81868838-81868619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               310-538
               

               Cow position:
               chr1:11729069-11729293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               310-538
               

               Cow position:
               chr1:44125759-44125520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               8, 169
               

               Conread position:
               310-538
               

               Cow position:
               chr1:53369973-53370201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               310-538
               

               Cow position:
               chr1:53671851-53671632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 127
               

               Conread position:
               310-540
               

               Cow position:
               chr1:52039524-52039757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               310-543
               

               Cow position:
               chr1:18780446-18780206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               310-544
               

               Cow position:
               chr1:6941353-6941594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               310-544
               

               Cow position:
               chr1:6958766-6959007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               310-544
               

               Cow position:
               chr1:79844354-79844589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               310-544
               

               Cow position:
               chr1:92369620-92369858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 205
               

               Conread position:
               310-606
               

               Cow position:
               chr1:85339294-85339581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               204, 35
               

               Conread position:
               310-607
               

               Cow position:
               chr1:29935490-29935186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 34
               

               Conread position:
               310-607
               

               Cow position:
               chr1:86682675-86682363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               310-608
               

               Cow position:
               chr1:4414320-4414023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 146
               

               Conread position:
               310-608
               

               Cow position:
               chr1:89510034-89509725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 297
               

               Conread position:
               311-466
               

               Cow position:
               chr1:45535596-45535752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-473
               

               Cow position:
               chr1:44155140-44155302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 58
               

               Conread position:
               311-500
               

               Cow position:
               chr1:6788395-6788204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 93
               

               Conread position:
               311-503
               

               Cow position:
               chr1:57297367-57297564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-508
               

               Cow position:
               chr1:89485466-89485667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               311-509
               

               Cow position:
               chr1:68951518-68951713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               311-513
               

               Cow position:
               chr1:5023865-5023670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               311-517
               

               Cow position:
               chr1:53425066-53425273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               311-519
               

               Cow position:
               chr1:20384729-20384524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               311-520
               

               Cow position:
               chr1:43703298-43703509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 89
               

               Conread position:
               311-526
               

               Cow position:
               chr1:55146693-55146902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-527
               

               Cow position:
               chr1:75141895-75142104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               131, 34
               

               Conread position:
               311-530
               

               Cow position:
               chr1:7350433-7350658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               311-530
               

               Cow position:
               chr1:89230337-89230121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               131, 21
               

               Conread position:
               311-531
               

               Cow position:
               chr1:3962802-3962576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               311-531
               

               Cow position:
               chr1:37309622-37309408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               133, 53
               

               Conread position:
               311-531
               

               Cow position:
               chr1:61543027-61542808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               311-531
               

               Cow position:
               chr1:95215290-95215079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               311-532
               

               Cow position:
               chr1:23999030-23998823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               311-533
               

               Cow position:
               chr1:38401685-38401912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 155
               

               Conread position:
               311-534
               

               Cow position:
               chr1:1991530-1991313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               311-535
               

               Cow position:
               chr1:45288981-45288757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               311-536
               

               Cow position:
               chr1:47658239-47658461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               131, 15
               

               Conread position:
               311-536
               

               Cow position:
               chr1:82884499-82884279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               311-537
               

               Cow position:
               chr1:53520802-53521032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               311-537
               

               Cow position:
               chr1:80422171-80422389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               311-537
               

               Cow position:
               chr1:89381165-89381392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               131, 106
               

               Conread position:
               311-538
               

               Cow position:
               chr1:261588-261354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               311-538
               

               Cow position:
               chr1:3352803-3352582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               203, 59
               

               Conread position:
               311-538
               

               Cow position:
               chr1:3882574-3882341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 137
               

               Conread position:
               311-538
               

               Cow position:
               chr1:4032519-4032750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr1:5135803-5135591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               131, 47
               

               Conread position:
               311-538
               

               Cow position:
               chr1:6826398-6826181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               311-538
               

               Cow position:
               chr1:7971312-7971530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               311-538
               

               Cow position:
               chr1:10716393-10716614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               311-538
               

               Cow position:
               chr1:11913986-11913759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               311-538
               

               Cow position:
               chr1:20950612-20950832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               135, 73
               

               Conread position:
               311-538
               

               Cow position:
               chr1:21955481-21955257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               311-538
               

               Cow position:
               chr1:25734759-25734985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               311-538
               

               Cow position:
               chr1:27463022-27463251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               311-538
               

               Cow position:
               chr1:28563676-28563451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               311-538
               

               Cow position:
               chr1:31608004-31607771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 155
               

               Conread position:
               311-538
               

               Cow position:
               chr1:32001430-32001203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 130
               

               Conread position:
               311-538
               

               Cow position:
               chr1:38278143-38277911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               311-538
               

               Cow position:
               chr1:39069064-39068838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               131, 83
               

               Conread position:
               311-538
               

               Cow position:
               chr1:42360173-42360406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr1:43311885-43311653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               90, 62
               

               Conread position:
               311-538
               

               Cow position:
               chr1:45553353-45553125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 157
               

               Conread position:
               311-538
               

               Cow position:
               chr1:48105543-48105318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               311-538
               

               Cow position:
               chr1:48581022-48581247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr1:50931085-50930861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               311-538
               

               Cow position:
               chr1:51445771-51446003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 132
               

               Conread position:
               311-538
               

               Cow position:
               chr1:54258455-54258684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               311-538
               

               Cow position:
               chr1:56618760-56618537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr1:65318469-65318692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr1:67688690-67688465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               311-538
               

               Cow position:
               chr1:71119409-71119637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               311-538
               

               Cow position:
               chr1:72035034-72034806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               311-538
               

               Cow position:
               chr1:74927775-74928002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr1:78697878-78697654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               311-538
               

               Cow position:
               chr1:78810930-78811156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               311-538
               

               Cow position:
               chr1:78857430-78857211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               311-538
               

               Cow position:
               chr1:86073486-86073714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               133, 87
               

               Conread position:
               311-538
               

               Cow position:
               chr1:87197718-87197938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               82, 25
               

               Conread position:
               311-538
               

               Cow position:
               chr1:89448788-89449018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr1:90621619-90621387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr1:90976194-90975971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-538
               

               Cow position:
               chr1:91875018-91874799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               311-538
               

               Cow position:
               chr1:92989480-92989708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               68, 88
               

               Conread position:
               311-538
               

               Cow position:
               chr1:93554735-93554954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               311-538
               

               Cow position:
               chr1:97231851-97232078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr1:98551606-98551837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 215
               

               Conread position:
               311-538
               

               Cow position:
               chr1:100706024-100706244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               311-539
               

               Cow position:
               chr1:34300659-34300432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               311-539
               

               Cow position:
               chr1:83583043-83582814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               64, 7
               

               Conread position:
               311-539
               

               Cow position:
               chr1:88652521-88652755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 83
               

               Conread position:
               311-540
               

               Cow position:
               chr1:31348549-31348316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               311-540
               

               Cow position:
               chr1:34771613-34771382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 84
               

               Conread position:
               311-540
               

               Cow position:
               chr1:53308497-53308273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               311-540
               

               Cow position:
               chr1:60281261-60281493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               311-540
               

               Cow position:
               chr1:64804211-64803982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               131, 58
               

               Conread position:
               311-540
               

               Cow position:
               chr1:69264707-69264929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               205, 33
               

               Conread position:
               311-540
               

               Cow position:
               chr1:88618487-88618716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               311-541
               

               Cow position:
               chr1:79165194-79164961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               311-542
               

               Cow position:
               chr1:24778095-24777872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               203, 79
               

               Conread position:
               311-542
               

               Cow position:
               chr1:68763791-68763566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               203, 8
               

               Conread position:
               311-542
               

               Cow position:
               chr1:75933163-75933389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               311-543
               

               Cow position:
               chr1:36932048-36932276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-543
               

               Cow position:
               chr1:76613236-76613012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               311-544
               

               Cow position:
               chr1:7023011-7023247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 62
               

               Conread position:
               311-544
               

               Cow position:
               chr1:15333775-15334015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 143
               

               Conread position:
               311-544
               

               Cow position:
               chr1:45555255-45555489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               311-544
               

               Cow position:
               chr1:48730934-48730707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               311-544
               

               Cow position:
               chr1:53622851-53623080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               219, 81
               

               Conread position:
               311-544
               

               Cow position:
               chr1:85550187-85549953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               311-544
               

               Cow position:
               chr1:90868550-90868323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               311-544
               

               Cow position:
               chr1:94226661-94226429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               311-544
               

               Cow position:
               chr1:101632448-101632212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               311-545
               

               Cow position:
               chr1:23512764-23512533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 44
               

               Conread position:
               311-545
               

               Cow position:
               chr1:56225684-56225909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               311-545
               

               Cow position:
               chr1:57575868-57575639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               311-546
               

               Cow position:
               chr1:24534363-24534129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-550
               

               Cow position:
               chr1:43822291-43822529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               311-550
               

               Cow position:
               chr1:93810320-93810559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               311-551
               

               Cow position:
               chr1:34856741-34856497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               311-551
               

               Cow position:
               chr1:61391898-61391661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 136
               

               Conread position:
               311-551
               

               Cow position:
               chr1:61742077-61741837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               311-551
               

               Cow position:
               chr1:63434915-63434674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               311-551
               

               Cow position:
               chr1:66430192-66430421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               311-563
               

               Cow position:
               chr1:100800247-100800499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-566
               

               Cow position:
               chr1:91811678-91811922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               311-570
               

               Cow position:
               chr1:6077789-6078044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               311-570
               

               Cow position:
               chr1:53458587-53458844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-579
               

               Cow position:
               chr1:68845592-68845332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               311-579
               

               Cow position:
               chr1:71079067-71078788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               311-591
               

               Cow position:
               chr1:26427971-26427691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               311-596
               

               Cow position:
               chr1:97090218-97090511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               311-599
               

               Cow position:
               chr1:81582013-81582292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               131, 58
               

               Conread position:
               311-601
               

               Cow position:
               chr1:93528589-93528893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               311-602
               

               Cow position:
               chr1:96472336-96472615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               311-603
               

               Cow position:
               chr1:5637185-5636871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-603
               

               Cow position:
               chr1:6304972-6304676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               311-603
               

               Cow position:
               chr1:31272550-31272254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-603
               

               Cow position:
               chr1:39225034-39224738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               311-603
               

               Cow position:
               chr1:41115824-41115535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-603
               

               Cow position:
               chr1:41138241-41137947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 92
               

               Conread position:
               311-603
               

               Cow position:
               chr1:52052830-52052532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               311-603
               

               Cow position:
               chr1:68827014-68826723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 93
               

               Conread position:
               311-604
               

               Cow position:
               chr1:70828793-70829098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               311-606
               

               Cow position:
               chr1:38753811-38754121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               311-606
               

               Cow position:
               chr1:42555154-42555447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               311-606
               

               Cow position:
               chr1:43855192-43855493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               65, 93
               

               Conread position:
               311-606
               

               Cow position:
               chr1:70538498-70538810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-606
               

               Cow position:
               chr1:79640400-79640085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-607
               

               Cow position:
               chr1:197113-196801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               311-607
               

               Cow position:
               chr1:7739845-7740148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 51
               

               Conread position:
               311-607
               

               Cow position:
               chr1:10942201-10941893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               311-607
               

               Cow position:
               chr1:10964185-10964493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               311-607
               

               Cow position:
               chr1:19482184-19481895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               311-607
               

               Cow position:
               chr1:20000860-20000551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               311-607
               

               Cow position:
               chr1:20104159-20104471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-607
               

               Cow position:
               chr1:20667851-20667545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-607
               

               Cow position:
               chr1:21787221-21787529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 255
               

               Conread position:
               311-607
               

               Cow position:
               chr1:22192655-22192975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               311-607
               

               Cow position:
               chr1:22525767-22526079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               311-607
               

               Cow position:
               chr1:24133167-24132858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               311-607
               

               Cow position:
               chr1:25383553-25383874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               311-607
               

               Cow position:
               chr1:31934403-31934709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               311-607
               

               Cow position:
               chr1:36998086-36998387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               131, 58
               

               Conread position:
               311-607
               

               Cow position:
               chr1:42482094-42482405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               311-607
               

               Cow position:
               chr1:42545895-42545595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 252
               

               Conread position:
               311-607
               

               Cow position:
               chr1:46218472-46218755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               311-607
               

               Cow position:
               chr1:49317605-49317296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               311-607
               

               Cow position:
               chr1:51417663-51417970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               311-607
               

               Cow position:
               chr1:53374322-53374632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 90
               

               Conread position:
               311-607
               

               Cow position:
               chr1:54156841-54156529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               133, 62
               

               Conread position:
               311-607
               

               Cow position:
               chr1:68862924-68863224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               311-607
               

               Cow position:
               chr1:69539588-69539890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               311-607
               

               Cow position:
               chr1:70434894-70435191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               311-607
               

               Cow position:
               chr1:72011918-72011617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               311-607
               

               Cow position:
               chr1:78794334-78794031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               311-607
               

               Cow position:
               chr1:81290398-81290709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 51
               

               Conread position:
               311-607
               

               Cow position:
               chr1:100551860-100552171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               311-607
               

               Cow position:
               chr1:102266377-102266065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               311-608
               

               Cow position:
               chr1:10632939-10633246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               311-608
               

               Cow position:
               chr1:40599934-40600231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 63
               

               Conread position:
               311-608
               

               Cow position:
               chr1:41181736-41182042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               311-608
               

               Cow position:
               chr1:42874056-42873771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               131, 31
               

               Conread position:
               311-608
               

               Cow position:
               chr1:54199491-54199189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               311-608
               

               Cow position:
               chr1:56225357-56225672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-608
               

               Cow position:
               chr1:61884810-61885118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               131, 30
               

               Conread position:
               311-608
               

               Cow position:
               chr1:68817908-68817594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               64, 92
               

               Conread position:
               311-608
               

               Cow position:
               chr1:74084303-74083982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               311-608
               

               Cow position:
               chr1:81569140-81568823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 63
               

               Conread position:
               311-608
               

               Cow position:
               chr1:82936695-82936399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               131, 34
               

               Conread position:
               311-608
               

               Cow position:
               chr1:98059940-98060265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               312-493
               

               Cow position:
               chr1:29451813-29451993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               312-493
               

               Cow position:
               chr1:72103741-72103922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               312-496
               

               Cow position:
               chr1:42398302-42398116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 93
               

               Conread position:
               312-502
               

               Cow position:
               chr1:5539382-5539195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               312-502
               

               Cow position:
               chr1:63138733-63138922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               312-502
               

               Cow position:
               chr1:63390879-63390686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 94
               

               Conread position:
               312-502
               

               Cow position:
               chr1:101983258-101983069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 88
               

               Conread position:
               312-509
               

               Cow position:
               chr1:14309143-14308944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               312-529
               

               Cow position:
               chr1:33409733-33409517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               312-538
               

               Cow position:
               chr1:8514-8733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               312-538
               

               Cow position:
               chr1:874542-874772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               312-538
               

               Cow position:
               chr1:17196740-17196509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               312-538
               

               Cow position:
               chr1:92997004-92996774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               312-538
               

               Cow position:
               chr1:100569046-100569274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 101
               

               Conread position:
               312-540
               

               Cow position:
               chr1:18936937-18936717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               223, 52
               

               Conread position:
               312-542
               

               Cow position:
               chr1:48769694-48769924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               312-544
               

               Cow position:
               chr1:67305349-67305118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               312-544
               

               Cow position:
               chr1:96081378-96081604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               312-545
               

               Cow position:
               chr1:16962117-16961885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               312-545
               

               Cow position:
               chr1:68855059-68855289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               312-556
               

               Cow position:
               chr1:39418229-39417975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 207
               

               Conread position:
               312-579
               

               Cow position:
               chr1:61735540-61735274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               130, 55
               

               Conread position:
               312-603
               

               Cow position:
               chr1:30047702-30047426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               269, 63
               

               Conread position:
               313-500
               

               Cow position:
               chr1:96478588-96478779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               313-529
               

               Cow position:
               chr1:10616773-10616997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               313-538
               

               Cow position:
               chr1:33206978-33206762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               154, 55
               

               Conread position:
               313-608
               

               Cow position:
               chr1:35162302-35162611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               65, 83
               

               Conread position:
               313-608
               

               Cow position:
               chr1:100450288-100449986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 89
               

               Conread position:
               314-502
               

               Cow position:
               chr1:63596160-63595973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               130, 51
               

               Conread position:
               314-538
               

               Cow position:
               chr1:71253659-71253438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               314-544
               

               Cow position:
               chr1:6752334-6752107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               119, 38
               

               Conread position:
               314-582
               

               Cow position:
               chr1:65028423-65028698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 244
               

               Conread position:
               314-607
               

               Cow position:
               chr1:3923901-3923599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               128, 61
               

               Conread position:
               314-607
               

               Cow position:
               chr1:5579948-5580237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               314-607
               

               Cow position:
               chr1:42887371-42887075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               314-607
               

               Cow position:
               chr1:64302354-64302045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               314-607
               

               Cow position:
               chr1:81228444-81228131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               315-429
               

               Cow position:
               chr1:41004468-41004353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               315-527
               

               Cow position:
               chr1:92433895-92434106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 86
               

               Conread position:
               315-545
               

               Cow position:
               chr1:89076734-89076508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 71
               

               Conread position:
               315-557
               

               Cow position:
               chr1:91039274-91039036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               315-602
               

               Cow position:
               chr1:42541491-42541791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               35, 85
               

               Conread position:
               315-608
               

               Cow position:
               chr1:97755411-97755706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               59, 170
               

               Conread position:
               316-534
               

               Cow position:
               chr1:58754899-58754683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               316-538
               

               Cow position:
               chr1:1981218-1980995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               317-537
               

               Cow position:
               chr1:86113508-86113283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               317-560
               

               Cow position:
               chr1:20732606-20732843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               317-608
               

               Cow position:
               chr1:64678598-64678886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               318-512
               

               Cow position:
               chr1:70026446-70026254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               318-527
               

               Cow position:
               chr1:99609266-99609475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               318-538
               

               Cow position:
               chr1:40531215-40530985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 144
               

               Conread position:
               318-551
               

               Cow position:
               chr1:47886588-47886349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               318-590
               

               Cow position:
               chr1:102349856-102349571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 130
               

               Conread position:
               318-608
               

               Cow position:
               chr1:88913216-88913526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               319-493
               

               Cow position:
               chr1:91370110-91369937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               319-524
               

               Cow position:
               chr1:81563635-81563849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               319-534
               

               Cow position:
               chr1:12978579-12978796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               319-538
               

               Cow position:
               chr1:22823804-22824023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               319-538
               

               Cow position:
               chr1:43389151-43388934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               319-538
               

               Cow position:
               chr1:46030858-46031077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 85
               

               Conread position:
               319-538
               

               Cow position:
               chr1:81613288-81613507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 56
               

               Conread position:
               319-538
               

               Cow position:
               chr1:93499525-93499738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               139, 26
               

               Conread position:
               319-541
               

               Cow position:
               chr1:80900016-80900240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               319-542
               

               Cow position:
               chr1:19227156-19226935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               127, 57
               

               Conread position:
               319-543
               

               Cow position:
               chr1:68619034-68618810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               319-543
               

               Cow position:
               chr1:98360499-98360281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               79, 59
               

               Conread position:
               319-544
               

               Cow position:
               chr1:68845258-68845044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               319-544
               

               Cow position:
               chr1:72356257-72356481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               195, 126
               

               Conread position:
               319-576
               

               Cow position:
               chr1:22827066-22827317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 42
               

               Conread position:
               319-578
               

               Cow position:
               chr1:101634603-101634872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               81, 56
               

               Conread position:
               319-579
               

               Cow position:
               chr1:24406995-24406740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               319-603
               

               Cow position:
               chr1:28176908-28177181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 80
               

               Conread position:
               319-607
               

               Cow position:
               chr1:41696957-41697259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               319-607
               

               Cow position:
               chr1:44506867-44507173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               319-607
               

               Cow position:
               chr1:61012208-61012511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               319-607
               

               Cow position:
               chr1:75744759-75745065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               319-607
               

               Cow position:
               chr1:78838697-78838992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               319-607
               

               Cow position:
               chr1:97611753-97611468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               136, 7
               

               Conread position:
               319-608
               

               Cow position:
               chr1:8129068-8128772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               319-608
               

               Cow position:
               chr1:12464767-12464459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               319-608
               

               Cow position:
               chr1:91023569-91023262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               319-608
               

               Cow position:
               chr1:102784862-102785152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               128, 24
               

               Conread position:
               320-524
               

               Cow position:
               chr1:56634995-56635202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               320-537
               

               Cow position:
               chr1:95499593-95499379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               320-538
               

               Cow position:
               chr1:51044406-51044191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 99
               

               Conread position:
               320-540
               

               Cow position:
               chr1:68253491-68253716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               320-540
               

               Cow position:
               chr1:77232668-77232457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               320-570
               

               Cow position:
               chr1:55818961-55819203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               184, 53
               

               Conread position:
               320-607
               

               Cow position:
               chr1:54206919-54206614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               56, 145
               

               Conread position:
               320-607
               

               Cow position:
               chr1:74956121-74955827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 127
               

               Conread position:
               320-608
               

               Cow position:
               chr1:82513456-82513146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               320-608
               

               Cow position:
               chr1:85866048-85866344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               321-538
               

               Cow position:
               chr1:24542681-24542452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 113
               

               Conread position:
               321-538
               

               Cow position:
               chr1:47233578-47233360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               54, 63
               

               Conread position:
               321-538
               

               Cow position:
               chr1:55705349-55705125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               45, 148
               

               Conread position:
               321-538
               

               Cow position:
               chr1:89342094-89341862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               321-539
               

               Cow position:
               chr1:72105312-72105525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               55, 77
               

               Conread position:
               321-563
               

               Cow position:
               chr1:34686091-34686329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               55, 72
               

               Conread position:
               321-605
               

               Cow position:
               chr1:73960606-73960889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               321-607
               

               Cow position:
               chr1:37322101-37321805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 148
               

               Conread position:
               321-607
               

               Cow position:
               chr1:61564697-61564986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 103
               

               Conread position:
               322-545
               

               Cow position:
               chr1:65103521-65103740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 129
               

               Conread position:
               322-607
               

               Cow position:
               chr1:43505426-43505729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               322-608
               

               Cow position:
               chr1:102306243-102305941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               323-540
               

               Cow position:
               chr1:30189049-30189272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               323-551
               

               Cow position:
               chr1:87072600-87072826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               323-591
               

               Cow position:
               chr1:98030817-98031104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               324-532
               

               Cow position:
               chr1:45670542-45670744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               118, 38
               

               Conread position:
               325-548
               

               Cow position:
               chr1:30418133-30417919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               189, 53
               

               Conread position:
               325-579
               

               Cow position:
               chr1:92963300-92963551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               327-538
               

               Cow position:
               chr1:90904847-90904638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 48
               

               Conread position:
               328-545
               

               Cow position:
               chr1:100474139-100474361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 68
               

               Conread position:
               329-538
               

               Cow position:
               chr1:61005647-61005445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               329-544
               

               Cow position:
               chr1:50991843-50992058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               115, 66
               

               Conread position:
               330-538
               

               Cow position:
               chr1:4581417-4581212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               332-538
               

               Cow position:
               chr1:13637751-13637545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               336-528
               

               Cow position:
               chr1:99793459-99793655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 136
               

               Conread position:
               336-537
               

               Cow position:
               chr1:8347039-8347240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               336-538
               

               Cow position:
               chr1:95153135-95153340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               337-576
               

               Cow position:
               chr1:59147423-59147192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               337-603
               

               Cow position:
               chr1:39427085-39426816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               337-607
               

               Cow position:
               chr1:47790749-47790463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               337-608
               

               Cow position:
               chr1:101714031-101714322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 37
               

               Conread position:
               338-536
               

               Cow position:
               chr1:78096842-78097043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               338-538
               

               Cow position:
               chr1:80841570-80841764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               338-603
               

               Cow position:
               chr1:82880562-82880832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               338-608
               

               Cow position:
               chr1:49825152-49824859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               339-548
               

               Cow position:
               chr1:96947798-96947591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               340-500
               

               Cow position:
               chr1:61560807-61560644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               340-538
               

               Cow position:
               chr1:52994940-52995144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               340-586
               

               Cow position:
               chr1:37124045-37124308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               342-608
               

               Cow position:
               chr1:52467223-52467491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               342-608
               

               Cow position:
               chr1:98583679-98583954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               344-540
               

               Cow position:
               chr1:79003897-79004092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 133
               

               Conread position:
               344-603
               

               Cow position:
               chr1:35671465-35671737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               345-492
               

               Cow position:
               chr1:41695524-41695671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               345-533
               

               Cow position:
               chr1:37707049-37706864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               345-533
               

               Cow position:
               chr1:85162625-85162434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               345-538
               

               Cow position:
               chr1:1956409-1956217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               345-538
               

               Cow position:
               chr1:68672675-68672484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               345-538
               

               Cow position:
               chr1:74822374-74822569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               345-540
               

               Cow position:
               chr1:83072362-83072561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               345-544
               

               Cow position:
               chr1:62036728-62036927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               345-551
               

               Cow position:
               chr1:93043948-93044148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               169, 17
               

               Conread position:
               345-551
               

               Cow position:
               chr1:98575970-98576178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               345-606
               

               Cow position:
               chr1:97954540-97954279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               345-607
               

               Cow position:
               chr1:89388262-89388548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               346-543
               

               Cow position:
               chr1:26934341-26934148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               346-608
               

               Cow position:
               chr1:84812017-84811735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               348-579
               

               Cow position:
               chr1:89158202-89157956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               349-541
               

               Cow position:
               chr1:92684763-92684571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               349-543
               

               Cow position:
               chr1:30983562-30983372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 46
               

               Conread position:
               350-528
               

               Cow position:
               chr1:27380392-27380564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               351-591
               

               Cow position:
               chr1:45223510-45223765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 61
               

               Conread position:
               353-532
               

               Cow position:
               chr1:92197385-92197565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 110
               

               Conread position:
               354-536
               

               Cow position:
               chr1:89497887-89498062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               354-538
               

               Cow position:
               chr1:3965775-3965951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               355-607
               

               Cow position:
               chr1:78066602-78066338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               356-533
               

               Cow position:
               chr1:30136419-30136241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               356-538
               

               Cow position:
               chr1:95072265-95072450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               356-544
               

               Cow position:
               chr1:86912374-86912564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               356-607
               

               Cow position:
               chr1:54267998-54267733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               356-608
               

               Cow position:
               chr1:3942273-3942010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               357-605
               

               Cow position:
               chr1:46143526-46143264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               357-608
               

               Cow position:
               chr1:52662236-52661970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               358-497
               

               Cow position:
               chr1:80904706-80904843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               358-543
               

               Cow position:
               chr1:5155280-5155096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               358-606
               

               Cow position:
               chr1:48206598-48206336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               358-608
               

               Cow position:
               chr1:62321852-62322093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               359-544
               

               Cow position:
               chr1:88359819-88360002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               360-538
               

               Cow position:
               chr1:52912956-52912780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               360-603
               

               Cow position:
               chr1:6854363-6854118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               156, 12
               

               Conread position:
               362-538
               

               Cow position:
               chr1:80584374-80584547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               362-551
               

               Cow position:
               chr1:84768936-84768748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               362-578
               

               Cow position:
               chr1:64113851-64113627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               362-607
               

               Cow position:
               chr1:48618296-48618042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               362-607
               

               Cow position:
               chr1:97303303-97303048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               372-604
               

               Cow position:
               chr1:97833662-97833899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               74, 62
               

               Conread position:
               373-544
               

               Cow position:
               chr1:95974348-95974525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               373-608
               

               Cow position:
               chr1:5597256-5597006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               108, 22
               

               Conread position:
               374-533
               

               Cow position:
               chr1:57090930-57091091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               374-608
               

               Cow position:
               chr1:43286298-43286535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               72, 141
               

               Conread position:
               374-608
               

               Cow position:
               chr1:92590149-92590379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 68
               

               Conread position:
               375-576
               

               Cow position:
               chr1:69481996-69481790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               375-606
               

               Cow position:
               chr1:101507314-101507554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               377-538
               

               Cow position:
               chr1:49153273-49153434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               377-603
               

               Cow position:
               chr1:33998714-33998950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 91
               

               Conread position:
               377-606
               

               Cow position:
               chr1:81481427-81481182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               65, 242
               

               Conread position:
               379-607
               

               Cow position:
               chr1:85771968-85772209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               385-608
               

               Cow position:
               chr1:67654356-67654119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               386-607
               

               Cow position:
               chr1:89158737-89158503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 84
               

               Conread position:
               387-538
               

               Cow position:
               chr1:48214189-48214040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               390-553
               

               Cow position:
               chr1:83618640-83618472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               52, 157
               

               Conread position:
               391-577
               

               Cow position:
               chr1:31855280-31855088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               392-601
               

               Cow position:
               chr1:98636675-98636872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 126
               

               Conread position:
               393-608
               

               Cow position:
               chr1:45575904-45576126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               395-603
               

               Cow position:
               chr1:41027048-41027273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               395-607
               

               Cow position:
               chr1:5006135-5006349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               396-568
               

               Cow position:
               chr1:27959576-27959401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               396-603
               

               Cow position:
               chr1:75382955-75383164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               397-543
               

               Cow position:
               chr1:62034853-62034706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               397-544
               

               Cow position:
               chr1:43312056-43311907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               397-544
               

               Cow position:
               chr1:67529030-67529179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               397-603
               

               Cow position:
               chr1:49980685-49980909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 80
               

               Conread position:
               397-607
               

               Cow position:
               chr1:55753240-55753014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               398-607
               

               Cow position:
               chr1:38205450-38205656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               399-538
               

               Cow position:
               chr1:19515642-19515501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               399-544
               

               Cow position:
               chr1:42537346-42537198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               399-573
               

               Cow position:
               chr1:95676312-95676137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               399-607
               

               Cow position:
               chr1:6760057-6759839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               399-608
               

               Cow position:
               chr1:72304411-72304196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 162
               

               Conread position:
               400-607
               

               Cow position:
               chr1:74082004-74081796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               401-551
               

               Cow position:
               chr1:24530481-24530632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               401-607
               

               Cow position:
               chr1:242536-242757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               402-538
               

               Cow position:
               chr1:54157274-54157414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               402-542
               

               Cow position:
               chr1:40935787-40935644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               402-551
               

               Cow position:
               chr1:8670753-8670907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               402-607
               

               Cow position:
               chr1:88338647-88338855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               402-607
               

               Cow position:
               chr1:93590606-93590385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               403-607
               

               Cow position:
               chr1:62142503-62142302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               404-538
               

               Cow position:
               chr1:19962035-19962168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 63
               

               Conread position:
               406-538
               

               Cow position:
               chr1:45315652-45315518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               409-528
               

               Cow position:
               chr1:31598912-31599033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               409-579
               

               Cow position:
               chr1:7793535-7793360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               410-544
               

               Cow position:
               chr1:66752641-66752503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               410-579
               

               Cow position:
               chr1:61011169-61011349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               411-570
               

               Cow position:
               chr1:759429-759269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 144
               

               Conread position:
               412-550
               

               Cow position:
               chr1:52429670-52429529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               412-607
               

               Cow position:
               chr1:68688573-68688784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               417-579
               

               Cow position:
               chr1:95516034-95516196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 125
               

               Conread position:
               417-607
               

               Cow position:
               chr1:99605192-99604987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               418-606
               

               Cow position:
               chr1:100852705-100852906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               419-538
               

               Cow position:
               chr1:83783933-83783812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               425-538
               

               Cow position:
               chr1:55685975-55685860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               425-607
               

               Cow position:
               chr1:43499293-43499105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               425-608
               

               Cow position:
               chr1:30948995-30949188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               426-603
               

               Cow position:
               chr1:79663435-79663252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               428-570
               

               Cow position:
               chr1:71946078-71945935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               428-607
               

               Cow position:
               chr1:70483328-70483130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               433-538
               

               Cow position:
               chr1:63460889-63460996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               435-607
               

               Cow position:
               chr1:42774924-42775111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               445-606
               

               Cow position:
               chr1:71636299-71636124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               445-607
               

               Cow position:
               chr1:81638572-81638744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               446-551
               

               Cow position:
               chr1:69378574-69378468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               446-607
               

               Cow position:
               chr1:42353186-42353349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 27
               

               Conread position:
               447-607
               

               Cow position:
               chr1:28354583-28354746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               451-603
               

               Cow position:
               chr1:73867151-73866995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               454-563
               

               Cow position:
               chr1:72811894-72812007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               457-603
               

               Cow position:
               chr1:84787306-84787461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               458-601
               

               Cow position:
               chr1:96362389-96362239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               460-608
               

               Cow position:
               chr1:51968576-51968733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               478-605
               

               Cow position:
               chr1:69498885-69498758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 56
               
Show alignments to all cow chromosomes.
Conread position:	274-493
Cow position:	chr1:95637689-95637904 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	150
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	102, 30
Conread position:	281-538
Cow position:	chr1:89349820-89350083 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	199
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 0
Conread position:	283-603
Cow position:	chr1:10778426-10778755 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	229
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	13, 118
Conread position:	286-563
Cow position:	chr1:98511792-98512072 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	199
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	29, 119
Conread position:	290-579
Cow position:	chr1:100400326-100400030 (view UCSC Genome Browser custom track)
Alignm length:	301
Alignm identity:	194
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	87, 201
Conread position:	291-538
Cow position:	chr1:84255635-84255885 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	186
Alignm E-value:	5.99756e-43
Alignm gaps (pig, cow):	84, 14
Conread position:	291-607
Cow position:	chr1:56477460-56477790 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	227
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	86, 19
Conread position:	295-533
Cow position:	chr1:100393288-100393050 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	172
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	7, 52
Conread position:	295-591
Cow position:	chr1:77720362-77720071 (view UCSC Genome Browser custom track)
Alignm length:	308
Alignm identity:	217
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	5, 100
Conread position:	296-603
Cow position:	chr1:19465932-19466237 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	205
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	79, 95
Conread position:	297-538
Cow position:	chr1:39510172-39509940 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	174
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	145, 53
Conread position:	298-538
Cow position:	chr1:101834702-101834933 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	168
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	220, 43
Conread position:	298-544
Cow position:	chr1:82337903-82337656 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	176
Alignm E-value:	7e-33
Alignm gaps (pig, cow):	74, 150
Conread position:	298-607
Cow position:	chr1:59518797-59519116 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	228
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	17, 47
Conread position:	300-607
Cow position:	chr1:71295429-71295099 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	240
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	30, 305
Conread position:	301-519
Cow position:	chr1:20204907-20205126 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	166
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	17, 168
Conread position:	301-525
Cow position:	chr1:62291811-62291596 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	160
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	14, 89
Conread position:	301-531
Cow position:	chr1:85647902-85647671 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	177
Alignm E-value:	5.99756e-43
Alignm gaps (pig, cow):	14, 96
Conread position:	301-533
Cow position:	chr1:41056563-41056791 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	181
Alignm E-value:	8.40779e-45
Alignm gaps (pig, cow):	140, 59
Conread position:	301-538
Cow position:	chr1:55357406-55357177 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	170
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	7, 100