Cow genome map

Conread name: rche01_o13.y1

Conread position: 283-515
Cow position: chr21:20192814-20193046 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 115

Conread position: 284-510
Cow position: chr21:46143875-46144106 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 123

Conread position: 289-542
Cow position: chr21:17193828-17193569 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 290-607
Cow position: chr21:4399730-4400056 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 226
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 103

Conread position: 293-543
Cow position: chr21:37706487-37706234 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 34

Conread position: 296-555
Cow position: chr21:297685-297949 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 50

Conread position: 296-579
Cow position: chr21:22860931-22861224 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 194

Conread position: 297-538
Cow position: chr21:41140785-41140542 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 97

Conread position: 298-544
Cow position: chr21:18800594-18800350 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 64

Conread position: 300-538
Cow position: chr21:10114396-10114159 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 53

Conread position: 301-513
Cow position: chr21:16187871-16187657 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 74

Conread position: 301-530
Cow position: chr21:2679493-2679716 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 94

Conread position: 301-538
Cow position: chr21:36795537-36795779 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 301-538
Cow position: chr21:45921121-45920883 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 99

Conread position: 301-607
Cow position: chr21:8206709-8207020 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 74, 9

Conread position: 302-607
Cow position: chr21:10673067-10673373 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 139, 72

Conread position: 302-607
Cow position: chr21:33997288-33996987 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 139, 71

Conread position: 302-608
Cow position: chr21:47719360-47719041 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 235
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 33

Conread position: 303-538
Cow position: chr21:395810-396043 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 93

Conread position: 305-538
Cow position: chr21:29069387-29069150 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 307-449
Cow position: chr21:16612569-16612709 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 34

Conread position: 307-537
Cow position: chr21:10561640-10561409 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 88

Conread position: 307-538
Cow position: chr21:22465141-22465366 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 91

Conread position: 307-544
Cow position: chr21:868981-868741 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 0

Conread position: 307-603
Cow position: chr21:24598605-24598902 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 49

Conread position: 309-538
Cow position: chr21:10001021-10001251 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 90

Conread position: 309-544
Cow position: chr21:42348728-42348514 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 66

Conread position: 310-520
Cow position: chr21:36789742-36789952 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 23

Conread position: 310-536
Cow position: chr21:8235607-8235388 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 83

Conread position: 310-537
Cow position: chr21:2657765-2657984 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 26

Conread position: 310-538
Cow position: chr21:724941-724703 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 156

Conread position: 310-538
Cow position: chr21:3818156-3818384 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 90

Conread position: 310-538
Cow position: chr21:10410167-10410398 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 102

Conread position: 310-538
Cow position: chr21:20152901-20153129 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 66, 95

Conread position: 310-538
Cow position: chr21:27341652-27341419 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 132

Conread position: 310-538
Cow position: chr21:28442691-28442908 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 50

Conread position: 310-538
Cow position: chr21:28733967-28733737 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 310-538
Cow position: chr21:33350691-33350917 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 42

Conread position: 310-542
Cow position: chr21:41974430-41974198 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 86

Conread position: 310-543
Cow position: chr21:33210147-33210370 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 9, 80

Conread position: 310-603
Cow position: chr21:3236469-3236762 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 145

Conread position: 310-605
Cow position: chr21:36910687-36910998 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 87

Conread position: 310-607
Cow position: chr21:15911346-15911641 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 162

Conread position: 310-607
Cow position: chr21:28919577-28919268 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 83

Conread position: 311-440
Cow position: chr21:41598066-41598196 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 311-449
Cow position: chr21:12960951-12960813 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 63

Conread position: 311-470
Cow position: chr21:2904525-2904371 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 26

Conread position: 311-491
Cow position: chr21:23192566-23192381 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 95

Conread position: 311-501
Cow position: chr21:9698135-9697942 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 93

Conread position: 311-503
Cow position: chr21:44515211-44515404 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 32

Conread position: 311-513
Cow position: chr21:18842286-18842087 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 135, 15

Conread position: 311-514
Cow position: chr21:45330653-45330456 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 75

Conread position: 311-516
Cow position: chr21:39401542-39401743 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 82

Conread position: 311-525
Cow position: chr21:20260373-20260157 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 69, 119

Conread position: 311-527
Cow position: chr21:18845067-18844846 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 311-530
Cow position: chr21:10292440-10292659 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 88

Conread position: 311-530
Cow position: chr21:30835311-30835531 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 133

Conread position: 311-530
Cow position: chr21:36909883-36910099 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 72

Conread position: 311-531
Cow position: chr21:31253492-31253702 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 76

Conread position: 311-531
Cow position: chr21:42841649-42841428 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 8, 20

Conread position: 311-536
Cow position: chr21:46985-47214 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 91

Conread position: 311-537
Cow position: chr21:23980232-23980007 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 75

Conread position: 311-537
Cow position: chr21:41621072-41621300 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 92

Conread position: 311-537
Cow position: chr21:42414152-42413922 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 61, 26

Conread position: 311-538
Cow position: chr21:6624108-6624333 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 63

Conread position: 311-538
Cow position: chr21:6997888-6998123 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 85

Conread position: 311-538
Cow position: chr21:7377981-7377750 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 97

Conread position: 311-538
Cow position: chr21:7581958-7581729 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 92

Conread position: 311-538
Cow position: chr21:9990464-9990686 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 64, 25

Conread position: 311-538
Cow position: chr21:10004939-10004710 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 163

Conread position: 311-538
Cow position: chr21:10151743-10151981 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 311-538
Cow position: chr21:10263981-10264208 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 39

Conread position: 311-538
Cow position: chr21:14760522-14760741 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 47

Conread position: 311-538
Cow position: chr21:15584472-15584243 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 86

Conread position: 311-538
Cow position: chr21:17511726-17511953 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 131, 60

Conread position: 311-538
Cow position: chr21:17890251-17890478 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 84

Conread position: 311-538
Cow position: chr21:21077555-21077776 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 94

Conread position: 311-538
Cow position: chr21:21169545-21169320 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 22, 32

Conread position: 311-538
Cow position: chr21:23322128-23321902 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 33

Conread position: 311-538
Cow position: chr21:23568169-23568404 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 64

Conread position: 311-538
Cow position: chr21:26244868-26245090 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 131, 53

Conread position: 311-538
Cow position: chr21:27569214-27568997 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 131, 13

Conread position: 311-538
Cow position: chr21:28190980-28191208 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 34

Conread position: 311-538
Cow position: chr21:28244417-28244646 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 93

Conread position: 311-538
Cow position: chr21:28924063-28924285 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 131, 23

Conread position: 311-538
Cow position: chr21:29002210-29001981 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 94

Conread position: 311-538
Cow position: chr21:29484927-29485154 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 158

Conread position: 311-538
Cow position: chr21:29978808-29978584 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 19

Conread position: 311-538
Cow position: chr21:32339789-32339564 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 84

Conread position: 311-538
Cow position: chr21:33562962-33563179 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 44

Conread position: 311-538
Cow position: chr21:41155811-41156046 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 171

Conread position: 311-538
Cow position: chr21:42007515-42007286 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 311-538
Cow position: chr21:42384458-42384684 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 84

Conread position: 311-538
Cow position: chr21:45262864-45262634 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 64

Conread position: 311-538
Cow position: chr21:47714055-47713834 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 33

Conread position: 311-539
Cow position: chr21:19196214-19195987 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 81

Conread position: 311-540
Cow position: chr21:1511239-1511467 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 83

Conread position: 311-541
Cow position: chr21:24642468-24642703 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 92

Conread position: 311-541
Cow position: chr21:28989562-28989793 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 49

Conread position: 311-542
Cow position: chr21:47363790-47363554 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 65, 93

Conread position: 311-543
Cow position: chr21:1591500-1591729 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 196

Conread position: 311-543
Cow position: chr21:28626188-28626418 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 127

Conread position: 311-544
Cow position: chr21:5464695-5464930 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 132

Conread position: 311-544
Cow position: chr21:6051455-6051685 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 83

Conread position: 311-544
Cow position: chr21:19258778-19258999 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 34

Conread position: 311-544
Cow position: chr21:22210295-22210063 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 13

Conread position: 311-544
Cow position: chr21:47764167-47763936 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 84

Conread position: 311-545
Cow position: chr21:12723108-12723335 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 25

Conread position: 311-545
Cow position: chr21:17183871-17184100 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 53, 82

Conread position: 311-545
Cow position: chr21:30990322-30990104 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 203, 49

Conread position: 311-550
Cow position: chr21:40432398-40432630 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 80

Conread position: 311-551
Cow position: chr21:3585415-3585180 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 131, 32

Conread position: 311-554
Cow position: chr21:46242288-46242052 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 20

Conread position: 311-555
Cow position: chr21:46552157-46551912 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 236

Conread position: 311-570
Cow position: chr21:27146041-27145786 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 71

Conread position: 311-570
Cow position: chr21:31691430-31691696 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 162

Conread position: 311-603
Cow position: chr21:12462022-12461710 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 311-603
Cow position: chr21:15544270-15543980 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 85

Conread position: 311-603
Cow position: chr21:38900726-38901022 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 67

Conread position: 311-606
Cow position: chr21:11645022-11644704 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 311-606
Cow position: chr21:33414137-33413835 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 82, 121

Conread position: 311-607
Cow position: chr21:641534-641847 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 85

Conread position: 311-607
Cow position: chr21:643276-643583 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 19

Conread position: 311-607
Cow position: chr21:957621-957932 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 23

Conread position: 311-607
Cow position: chr21:5426889-5427190 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 82

Conread position: 311-607
Cow position: chr21:5898451-5898146 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 131, 64

Conread position: 311-607
Cow position: chr21:6713577-6713261 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 22

Conread position: 311-607
Cow position: chr21:23586828-23587135 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 90

Conread position: 311-607
Cow position: chr21:30222292-30222605 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 34

Conread position: 311-607
Cow position: chr21:31662412-31662710 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 111

Conread position: 311-607
Cow position: chr21:34654025-34654333 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 8

Conread position: 311-607
Cow position: chr21:35899792-35900078 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 84

Conread position: 311-607
Cow position: chr21:38449499-38449188 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 156

Conread position: 311-607
Cow position: chr21:39403588-39403265 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 311-607
Cow position: chr21:40134108-40134409 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 75

Conread position: 311-607
Cow position: chr21:45355784-45356078 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 133, 80

Conread position: 311-607
Cow position: chr21:45906673-45906358 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 84

Conread position: 311-607
Cow position: chr21:45971223-45970916 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 81

Conread position: 311-607
Cow position: chr21:46849177-46848869 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 33

Conread position: 311-607
Cow position: chr21:48234212-48233913 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 131, 62

Conread position: 311-608
Cow position: chr21:82027-82323 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 63, 72

Conread position: 311-608
Cow position: chr21:4281923-4281618 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 131, 64

Conread position: 311-608
Cow position: chr21:9940246-9939945 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 84

Conread position: 311-608
Cow position: chr21:23535662-23535977 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 14, 34

Conread position: 311-608
Cow position: chr21:25800343-25800640 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 121

Conread position: 311-608
Cow position: chr21:27229846-27229539 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 157

Conread position: 311-608
Cow position: chr21:32559411-32559107 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 62

Conread position: 312-493
Cow position: chr21:13840274-13840456 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 93

Conread position: 312-500
Cow position: chr21:37790051-37789862 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 87

Conread position: 312-501
Cow position: chr21:7564368-7564169 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 312-501
Cow position: chr21:22856170-22856356 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 21

Conread position: 312-510
Cow position: chr21:18155618-18155419 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 62, 88

Conread position: 312-528
Cow position: chr21:25127553-25127769 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 312-531
Cow position: chr21:17008933-17009149 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 21

Conread position: 312-538
Cow position: chr21:27521382-27521164 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 204, 71

Conread position: 313-503
Cow position: chr21:43357308-43357116 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 120

Conread position: 313-537
Cow position: chr21:6834000-6834224 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 86

Conread position: 313-538
Cow position: chr21:33671-33895 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 82

Conread position: 313-538
Cow position: chr21:5153580-5153796 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 131, 52

Conread position: 313-538
Cow position: chr21:40168677-40168450 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 87

Conread position: 313-538
Cow position: chr21:40266074-40266297 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 83

Conread position: 313-551
Cow position: chr21:9416198-9416440 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 63, 79

Conread position: 313-603
Cow position: chr21:20418734-20418447 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 215

Conread position: 313-603
Cow position: chr21:30231741-30231437 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 56

Conread position: 314-493
Cow position: chr21:13488473-13488657 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 314-512
Cow position: chr21:34391024-34390826 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 62, 81

Conread position: 314-525
Cow position: chr21:19060136-19059931 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 78

Conread position: 314-536
Cow position: chr21:36297441-36297667 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 314-538
Cow position: chr21:47465171-47464943 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 178

Conread position: 314-540
Cow position: chr21:41522456-41522236 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 93

Conread position: 314-542
Cow position: chr21:2810211-2809981 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 83

Conread position: 314-544
Cow position: chr21:27624660-27624880 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 72

Conread position: 314-545
Cow position: chr21:13365289-13365525 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 52, 142

Conread position: 314-606
Cow position: chr21:44658533-44658823 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 200, 59

Conread position: 314-607
Cow position: chr21:44214075-44214374 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 154

Conread position: 314-608
Cow position: chr21:25764589-25764880 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 31

Conread position: 314-608
Cow position: chr21:27863564-27863255 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 60

Conread position: 314-608
Cow position: chr21:37299415-37299724 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 30

Conread position: 314-608
Cow position: chr21:38121052-38121343 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 59

Conread position: 314-608
Cow position: chr21:41590609-41590302 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 46

Conread position: 316-538
Cow position: chr21:34151537-34151757 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 61, 80

Conread position: 316-542
Cow position: chr21:25628957-25628731 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 70

Conread position: 316-591
Cow position: chr21:7394335-7394616 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 70

Conread position: 317-608
Cow position: chr21:742242-742538 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 24

Conread position: 318-538
Cow position: chr21:24858270-24858491 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 55

Conread position: 318-541
Cow position: chr21:21907474-21907256 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 82

Conread position: 318-603
Cow position: chr21:30848993-30848689 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 87

Conread position: 318-604
Cow position: chr21:29014958-29014657 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 144

Conread position: 318-607
Cow position: chr21:33580376-33580674 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 68

Conread position: 319-469
Cow position: chr21:18041892-18041741 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 84

Conread position: 319-497
Cow position: chr21:10601418-10601241 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 16

Conread position: 319-503
Cow position: chr21:4795182-4795360 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 57

Conread position: 319-503
Cow position: chr21:19363507-19363319 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 319-526
Cow position: chr21:18850272-18850059 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 319-532
Cow position: chr21:35354489-35354703 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 84

Conread position: 319-536
Cow position: chr21:46264128-46264344 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 33

Conread position: 319-537
Cow position: chr21:5392584-5392360 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 52, 0

Conread position: 319-538
Cow position: chr21:16152392-16152617 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 319-538
Cow position: chr21:32297551-32297343 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 39

Conread position: 319-538
Cow position: chr21:33263805-33264021 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 41

Conread position: 319-538
Cow position: chr21:34010441-34010222 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 106

Conread position: 319-544
Cow position: chr21:22014143-22014372 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 128

Conread position: 319-544
Cow position: chr21:45473796-45473575 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 125, 39

Conread position: 319-562
Cow position: chr21:44825929-44825686 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 123, 43

Conread position: 319-603
Cow position: chr21:1059034-1059317 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 86

Conread position: 319-605
Cow position: chr21:8349284-8349583 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 56, 150

Conread position: 319-606
Cow position: chr21:4280716-4280425 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 26

Conread position: 319-606
Cow position: chr21:16569857-16570151 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 74

Conread position: 319-607
Cow position: chr21:33982850-33982551 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 84

Conread position: 319-608
Cow position: chr21:8426397-8426707 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 17, 61

Conread position: 319-608
Cow position: chr21:12339595-12339881 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 18

Conread position: 319-608
Cow position: chr21:20262377-20262083 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 22

Conread position: 321-543
Cow position: chr21:45329988-45329768 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 76

Conread position: 321-544
Cow position: chr21:37345139-37344919 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 75

Conread position: 321-608
Cow position: chr21:30592346-30592050 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 41

Conread position: 322-538
Cow position: chr21:40589526-40589306 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 83

Conread position: 323-536
Cow position: chr21:14452196-14452408 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 116, 52

Conread position: 323-537
Cow position: chr21:31090469-31090260 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 5, 57

Conread position: 323-538
Cow position: chr21:45835442-45835213 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 73

Conread position: 323-541
Cow position: chr21:471637-471853 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 63

Conread position: 323-551
Cow position: chr21:42135660-42135425 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 52, 0

Conread position: 325-489
Cow position: chr21:17856504-17856670 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 116

Conread position: 325-528
Cow position: chr21:29214193-29213994 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 19

Conread position: 326-538
Cow position: chr21:20160641-20160852 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 70

Conread position: 326-538
Cow position: chr21:29014597-29014383 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 47

Conread position: 326-579
Cow position: chr21:18064950-18064697 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 28

Conread position: 327-607
Cow position: chr21:42209667-42209382 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 216

Conread position: 330-536
Cow position: chr21:734563-734763 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 63

Conread position: 330-538
Cow position: chr21:11740154-11739944 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 162

Conread position: 334-524
Cow position: chr21:20183041-20183233 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 17, 11

Conread position: 337-538
Cow position: chr21:10538276-10538079 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 36

Conread position: 338-606
Cow position: chr21:14126263-14126534 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 14

Conread position: 338-606
Cow position: chr21:28030263-28030541 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 65

Conread position: 338-607
Cow position: chr21:28211172-28211440 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 38, 48

Conread position: 344-530
Cow position: chr21:47160198-47160386 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 344-607
Cow position: chr21:21615763-21616039 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 16

Conread position: 345-524
Cow position: chr21:42540240-42540059 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 28

Conread position: 345-544
Cow position: chr21:13585072-13584879 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 51

Conread position: 345-544
Cow position: chr21:30250214-30250022 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 43

Conread position: 345-550
Cow position: chr21:12801770-12801561 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 193

Conread position: 345-551
Cow position: chr21:15611128-15611330 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 25

Conread position: 345-607
Cow position: chr21:674668-674931 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 28

Conread position: 346-538
Cow position: chr21:829227-829034 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 51, 27

Conread position: 346-608
Cow position: chr21:71571-71850 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 108, 13

Conread position: 348-542
Cow position: chr21:9256672-9256484 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 127

Conread position: 352-538
Cow position: chr21:7169676-7169864 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 25, 7

Conread position: 356-538
Cow position: chr21:7768427-7768614 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 356-538
Cow position: chr21:30980585-30980402 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 28

Conread position: 356-538
Cow position: chr21:41046797-41046982 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 19, 60

Conread position: 357-529
Cow position: chr21:19240881-19240706 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 16

Conread position: 362-533
Cow position: chr21:9027313-9027486 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 12

Conread position: 362-538
Cow position: chr21:7394284-7394113 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 80, 11

Conread position: 362-538
Cow position: chr21:28599888-28600059 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 172, 40

Conread position: 362-603
Cow position: chr21:46599358-46599617 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 365-608
Cow position: chr21:19868955-19868698 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 5, 54

Conread position: 372-538
Cow position: chr21:36682331-36682501 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 373-606
Cow position: chr21:19360166-19359933 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 69, 17

Conread position: 373-608
Cow position: chr21:12104375-12104617 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 69, 22

Conread position: 381-579
Cow position: chr21:41287775-41287564 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 21

Conread position: 393-608
Cow position: chr21:16498548-16498779 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 52, 74

Conread position: 395-540
Cow position: chr21:20163739-20163886 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 395-546
Cow position: chr21:17252947-17252795 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 63

Conread position: 395-579
Cow position: chr21:46451921-46451740 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 47, 35

Conread position: 395-607
Cow position: chr21:31279288-31279516 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 7

Conread position: 396-606
Cow position: chr21:22850954-22851177 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 46, 30

Conread position: 397-607
Cow position: chr21:6851205-6851428 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 55, 48

Conread position: 398-538
Cow position: chr21:11057843-11057705 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 5

Conread position: 398-608
Cow position: chr21:802283-802059 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 400-538
Cow position: chr21:39393784-39393925 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 400-604
Cow position: chr21:24875387-24875612 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 402-525
Cow position: chr21:7088638-7088764 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 402-606
Cow position: chr21:11678265-11678060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 40

Conread position: 405-544
Cow position: chr21:31147893-31147752 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 21

Conread position: 411-538
Cow position: chr21:5342047-5341918 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 413-544
Cow position: chr21:30243632-30243498 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 415-538
Cow position: chr21:27810438-27810563 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 55

Conread position: 417-538
Cow position: chr21:5486461-5486335 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 417-608
Cow position: chr21:25012135-25012342 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 25, 94

Conread position: 418-538
Cow position: chr21:14228226-14228104 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 418-608
Cow position: chr21:15012493-15012695 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 422-544
Cow position: chr21:40059086-40059212 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 424-608
Cow position: chr21:20174378-20174576 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 426-608
Cow position: chr21:30657932-30658125 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 433-606
Cow position: chr21:8506477-8506285 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 433-606
Cow position: chr21:8509365-8509173 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 434-548
Cow position: chr21:5961847-5961962 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 12, 72

Conread position: 435-606
Cow position: chr21:235976-236151 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 446-608
Cow position: chr21:9710645-9710488 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 20

Conread position: 459-604
Cow position: chr21:31462658-31462817 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 464-544
Cow position: chr21:6603041-6603122 (view UCSC Genome Browser custom track)
Alignm length: 82
Alignm identity: 74
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 478-607
Cow position: chr21:12075045-12074915 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 60

Show alignments to all cow chromosomes.