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Cow genome map

           
Conread name:
           
rche01_o13.y1
        

               
Conread position:
               
288-541
               

               
Cow position:
               
chr27:16780964-16780711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
290-543
               

               
Cow position:
               
chr27:29184743-29184997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
290-571
               

               
Cow position:
               
chr27:10307211-10307486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
293-607
               

               
Cow position:
               
chr27:13252098-13251788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
295-537
               

               
Cow position:
               
chr27:27388934-27389178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
296-540
               

               
Cow position:
               
chr27:4385974-4386220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
299-488
               

               
Cow position:
               
chr27:20789292-20789484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
300-530
               

               
Cow position:
               
chr27:20553803-20553584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 60
               

               
Conread position:
               
300-603
               

               
Cow position:
               
chr27:14343383-14343674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
178, 75
               

               
Conread position:
               
301-518
               

               
Cow position:
               
chr27:30551080-30550854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
301-570
               

               
Cow position:
               
chr27:19546423-19546703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
301-598
               

               
Cow position:
               
chr27:4858563-4858853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
301-601
               

               
Cow position:
               
chr27:29431540-29431239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
301-608
               

               
Cow position:
               
chr27:22171383-22171058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
302-565
               

               
Cow position:
               
chr27:19718003-19717729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 71
               

               
Conread position:
               
303-545
               

               
Cow position:
               
chr27:20641261-20641496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
105, 41
               

               
Conread position:
               
305-538
               

               
Cow position:
               
chr27:16589637-16589858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
308-538
               

               
Cow position:
               
chr27:15215308-15215071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
309-538
               

               
Cow position:
               
chr27:29380931-29380699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
309-580
               

               
Cow position:
               
chr27:20037052-20037312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
309-607
               

               
Cow position:
               
chr27:20748933-20749245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 127
               

               
Conread position:
               
310-516
               

               
Cow position:
               
chr27:30868667-30868873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
310-538
               

               
Cow position:
               
chr27:30915080-30914854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
310-544
               

               
Cow position:
               
chr27:23483300-23483065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
310-599
               

               
Cow position:
               
chr27:15408968-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
310-600
               

               
Cow position:
               
chr27:26865045-26865344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
310-607
               

               
Cow position:
               
chr27:23930049-23929735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
310-608
               

               
Cow position:
               
chr27:26151096-26150804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
310-608
               

               
Cow position:
               
chr27:30890362-30890057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
311-498
               

               
Cow position:
               
chr27:25380065-25379873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
311-501
               

               
Cow position:
               
chr27:815438-815244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr27:21408489-21408682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
311-526
               

               
Cow position:
               
chr27:27843924-27844146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr27:24014668-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
311-530
               

               
Cow position:
               
chr27:8263265-8263483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr27:23891012-23890787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
311-534
               

               
Cow position:
               
chr27:11435250-11435472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr27:15866289-15866065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:19685639-19685868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:26239097-26238871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:27136447-27136674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:30765108-30764881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:1353659-1353427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:4673091-4672856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:6925161-6924929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 135
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:8942611-8942845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:11480559-11480792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:15378406-15378629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:16088881-16088649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:16965645-16965421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:17331571-17331347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 158
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:17994871-17995099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:20067906-20068130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:23594388-23594166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:26413181-26413410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:26509089-26509309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:27270470-27270698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:27460503-27460726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:28518361-28518140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:28931722-28931957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:29312600-29312830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:30260821-30261048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:30871988-30872212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr27:30988868-30988642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
311-539
               

               
Cow position:
               
chr27:19661007-19660775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
311-540
               

               
Cow position:
               
chr27:2592620-2592383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
311-541
               

               
Cow position:
               
chr27:4812808-4813041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 216
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr27:427041-426810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr27:7935086-7935317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr27:12246729-12246493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr27:14670312-14670542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
311-543
               

               
Cow position:
               
chr27:23472324-23472097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:2957473-2957250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:18558431-18558199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:19388086-19387856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:22569844-22569623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 50
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:30359477-30359243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr27:31148833-31148600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
311-545
               

               
Cow position:
               
chr27:16103880-16103649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
311-548
               

               
Cow position:
               
chr27:26581363-26581602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr27:1123103-1122864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
311-555
               

               
Cow position:
               
chr27:27038768-27039009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
311-570
               

               
Cow position:
               
chr27:18593339-18593090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
311-570
               

               
Cow position:
               
chr27:22559752-22560010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
311-577
               

               
Cow position:
               
chr27:26428061-26428327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
311-579
               

               
Cow position:
               
chr27:21669051-21669324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
311-579
               

               
Cow position:
               
chr27:27442101-27442372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
311-590
               

               
Cow position:
               
chr27:21393431-21393719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
311-591
               

               
Cow position:
               
chr27:435307-435005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
311-603
               

               
Cow position:
               
chr27:12596837-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
311-603
               

               
Cow position:
               
chr27:15867468-15867154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 92
               

               
Conread position:
               
311-606
               

               
Cow position:
               
chr27:22386942-22386646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr27:20828639-20828947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr27:22035305-22035614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr27:28001738-28002046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr27:28206866-28206561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr27:4944446-4944750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr27:15454283-15453969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr27:22547336-22547632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr27:15871231-15871042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr27:18739455-18739258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr27:20078935-20078749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr27:22513608-22513804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
312-544
               

               
Cow position:
               
chr27:22454707-22454938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
312-551
               

               
Cow position:
               
chr27:26226220-26226458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
312-556
               

               
Cow position:
               
chr27:19647868-19648113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 232
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr27:7615018-7615312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
313-538
               

               
Cow position:
               
chr27:8168360-8168586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
313-545
               

               
Cow position:
               
chr27:536529-536301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
313-545
               

               
Cow position:
               
chr27:10979929-10979700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
313-564
               

               
Cow position:
               
chr27:26807493-26807756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
64, 110
               

               
Conread position:
               
314-516
               

               
Cow position:
               
chr27:16625967-16625767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
314-538
               

               
Cow position:
               
chr27:1768553-1768779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
314-538
               

               
Cow position:
               
chr27:26959549-26959771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr27:6550526-6550305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
314-540
               

               
Cow position:
               
chr27:20795856-20795634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
314-542
               

               
Cow position:
               
chr27:22418698-22418926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
314-607
               

               
Cow position:
               
chr27:22225526-22225812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
315-538
               

               
Cow position:
               
chr27:20514889-20514667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
315-538
               

               
Cow position:
               
chr27:26111841-26112071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
315-544
               

               
Cow position:
               
chr27:25277205-25276980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
316-533
               

               
Cow position:
               
chr27:24321253-24321039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
317-565
               

               
Cow position:
               
chr27:4156068-4155816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 203
               

               
Conread position:
               
318-528
               

               
Cow position:
               
chr27:23554265-23554471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
318-538
               

               
Cow position:
               
chr27:22489343-22489121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 77
               

               
Conread position:
               
318-539
               

               
Cow position:
               
chr27:24738726-24738956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 217
               

               
Conread position:
               
318-543
               

               
Cow position:
               
chr27:30354278-30354505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
318-562
               

               
Cow position:
               
chr27:26013309-26013554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
318-562
               

               
Cow position:
               
chr27:27640937-27641193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 173
               

               
Conread position:
               
319-530
               

               
Cow position:
               
chr27:26407101-26407307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr27:20497276-20497055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
319-533
               

               
Cow position:
               
chr27:24440164-24440373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
319-534
               

               
Cow position:
               
chr27:15668706-15668923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
133, 123
               

               
Conread position:
               
319-537
               

               
Cow position:
               
chr27:29164829-29164619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
319-537
               

               
Cow position:
               
chr27:30406973-30407191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
319-541
               

               
Cow position:
               
chr27:1498381-1498156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr27:20549644-20549883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
319-591
               

               
Cow position:
               
chr27:16284533-16284262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
91, 43
               

               
Conread position:
               
319-603
               

               
Cow position:
               
chr27:22220620-22220311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr27:24477477-24477183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 57
               

               
Conread position:
               
319-608
               

               
Cow position:
               
chr27:17397387-17397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
320-539
               

               
Cow position:
               
chr27:27856394-27856176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
320-541
               

               
Cow position:
               
chr27:590704-590921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
320-544
               

               
Cow position:
               
chr27:31017771-31017987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
194, 74
               

               
Conread position:
               
320-603
               

               
Cow position:
               
chr27:26984412-26984115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
320-608
               

               
Cow position:
               
chr27:8353536-8353251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
321-500
               

               
Cow position:
               
chr27:21976111-21975936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
321-537
               

               
Cow position:
               
chr27:27694709-27694923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
321-538
               

               
Cow position:
               
chr27:8062292-8062505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
321-541
               

               
Cow position:
               
chr27:8405763-8405981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
321-557
               

               
Cow position:
               
chr27:17646111-17646347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
321-579
               

               
Cow position:
               
chr27:23559969-23560241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
321-605
               

               
Cow position:
               
chr27:20283704-20283403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
321-607
               

               
Cow position:
               
chr27:20812967-20812681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
321-607
               

               
Cow position:
               
chr27:23452521-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
322-545
               

               
Cow position:
               
chr27:26433749-26433970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
322-608
               

               
Cow position:
               
chr27:16478278-16478566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
323-484
               

               
Cow position:
               
chr27:24306888-24306728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
324-608
               

               
Cow position:
               
chr27:29504587-29504874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
48, 208
               

               
Conread position:
               
326-531
               

               
Cow position:
               
chr27:23107844-23108049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
326-604
               

               
Cow position:
               
chr27:299326-299614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
330-538
               

               
Cow position:
               
chr27:7212658-7212869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
330-607
               

               
Cow position:
               
chr27:8962203-8962484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
336-531
               

               
Cow position:
               
chr27:20629107-20628920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
336-544
               

               
Cow position:
               
chr27:1290803-1291014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
338-608
               

               
Cow position:
               
chr27:23485258-23484972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
339-538
               

               
Cow position:
               
chr27:26999375-26999577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
341-551
               

               
Cow position:
               
chr27:17918273-17918482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
343-545
               

               
Cow position:
               
chr27:16705292-16705086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
345-538
               

               
Cow position:
               
chr27:213002-212800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
345-545
               

               
Cow position:
               
chr27:4720074-4720279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
346-538
               

               
Cow position:
               
chr27:20517696-20517508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
346-545
               

               
Cow position:
               
chr27:4835566-4835770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
347-538
               

               
Cow position:
               
chr27:26853321-26853513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
348-502
               

               
Cow position:
               
chr27:21130344-21130187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
354-538
               

               
Cow position:
               
chr27:12459316-12459133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
356-538
               

               
Cow position:
               
chr27:18767035-18767216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
356-608
               

               
Cow position:
               
chr27:20092802-20093057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
362-538
               

               
Cow position:
               
chr27:29597728-29597903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
367-606
               

               
Cow position:
               
chr27:20897007-20897262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
372-606
               

               
Cow position:
               
chr27:6981930-6981704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
372-608
               

               
Cow position:
               
chr27:31004952-31004698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
373-538
               

               
Cow position:
               
chr27:24305447-24305282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
373-576
               

               
Cow position:
               
chr27:28478591-28478375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
373-605
               

               
Cow position:
               
chr27:31210557-31210309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
373-607
               

               
Cow position:
               
chr27:19509024-19508769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
374-542
               

               
Cow position:
               
chr27:237278-237110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
374-590
               

               
Cow position:
               
chr27:22421841-22422060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
377-542
               

               
Cow position:
               
chr27:26915419-26915592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
386-607
               

               
Cow position:
               
chr27:31557075-31556851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
387-608
               

               
Cow position:
               
chr27:27055284-27055052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
6, 80
               

               
Conread position:
               
390-544
               

               
Cow position:
               
chr27:788805-788960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
390-602
               

               
Cow position:
               
chr27:6106694-6106469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
390-607
               

               
Cow position:
               
chr27:26617400-26617172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
124, 55
               

               
Conread position:
               
391-607
               

               
Cow position:
               
chr27:9977678-9977443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
395-607
               

               
Cow position:
               
chr27:7412382-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
396-538
               

               
Cow position:
               
chr27:22348478-22348334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
396-538
               

               
Cow position:
               
chr27:30489422-30489566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
397-579
               

               
Cow position:
               
chr27:6319906-6319711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
397-608
               

               
Cow position:
               
chr27:7343441-7343672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
398-538
               

               
Cow position:
               
chr27:6674264-6674125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
398-551
               

               
Cow position:
               
chr27:31386644-31386800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
399-608
               

               
Cow position:
               
chr27:21993732-21993943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
400-608
               

               
Cow position:
               
chr27:15002994-15003223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
401-554
               

               
Cow position:
               
chr27:13376265-13376413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
403-526
               

               
Cow position:
               
chr27:20656637-20656763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
403-543
               

               
Cow position:
               
chr27:12710230-12710086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
404-538
               

               
Cow position:
               
chr27:22179789-22179922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
411-607
               

               
Cow position:
               
chr27:13204432-13204222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
411-607
               

               
Cow position:
               
chr27:31169137-31169348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
416-540
               

               
Cow position:
               
chr27:11466497-11466620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
416-605
               

               
Cow position:
               
chr27:6162442-6162644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
417-563
               

               
Cow position:
               
chr27:26323415-26323267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
417-605
               

               
Cow position:
               
chr27:18435166-18435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
417-607
               

               
Cow position:
               
chr27:30986350-30986530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
421-606
               

               
Cow position:
               
chr27:20770565-20770758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
426-537
               

               
Cow position:
               
chr27:27532098-27531983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
426-606
               

               
Cow position:
               
chr27:19576365-19576565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
427-607
               

               
Cow position:
               
chr27:20888677-20888492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 104
               

               
Conread position:
               
427-608
               

               
Cow position:
               
chr27:19741451-19741635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
15, 110
               

               
Conread position:
               
434-608
               

               
Cow position:
               
chr27:2949377-2949560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
439-608
               

               
Cow position:
               
chr27:6151242-6151070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
442-608
               

               
Cow position:
               
chr27:24358274-24358096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
449-538
               

               
Cow position:
               
chr27:9697587-9697497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
453-591
               

               
Cow position:
               
chr27:31031385-31031240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.