Non-Coding RNA Search

Cow genome map


           Conread name:
           rche01_o13.y1
        

               Conread position:
               290-544
               

               Cow position:
               chr28:26982868-26982615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               294-605
               

               Cow position:
               chr28:25249226-25249537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               82, 103
               

               Conread position:
               295-482
               

               Cow position:
               chr28:3256669-3256858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 115
               

               Conread position:
               296-519
               

               Cow position:
               chr28:18186428-18186654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 124
               

               Conread position:
               296-562
               

               Cow position:
               chr28:7549185-7548918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               70, 99
               

               Conread position:
               296-605
               

               Cow position:
               chr28:616258-616571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               298-607
               

               Cow position:
               chr28:20124660-20124985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 97
               

               Conread position:
               299-538
               

               Cow position:
               chr28:9285497-9285260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               16, 175
               

               Conread position:
               301-532
               

               Cow position:
               chr28:8408613-8408847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               301-533
               

               Cow position:
               chr28:15043982-15043750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               301-536
               

               Cow position:
               chr28:4138791-4138556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 99
               

               Conread position:
               301-551
               

               Cow position:
               chr28:34230109-34230358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               301-608
               

               Cow position:
               chr28:5204071-5204390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               302-556
               

               Cow position:
               chr28:3169314-3169054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 150
               

               Conread position:
               303-510
               

               Cow position:
               chr28:7512706-7512496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               305-608
               

               Cow position:
               chr28:3024028-3023711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               307-545
               

               Cow position:
               chr28:12619452-12619698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 202
               

               Conread position:
               308-516
               

               Cow position:
               chr28:3484464-3484674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               308-551
               

               Cow position:
               chr28:25728086-25728327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               67, 85
               

               Conread position:
               309-533
               

               Cow position:
               chr28:14997952-14998178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               63, 217
               

               Conread position:
               309-538
               

               Cow position:
               chr28:21363632-21363857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               6, 92
               

               Conread position:
               309-607
               

               Cow position:
               chr28:22813151-22813452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               310-436
               

               Cow position:
               chr28:27428630-27428759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               310-507
               

               Cow position:
               chr28:21672689-21672878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               310-514
               

               Cow position:
               chr28:4536343-4536551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 83
               

               Conread position:
               310-535
               

               Cow position:
               chr28:2862752-2862982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               310-543
               

               Cow position:
               chr28:25596519-25596750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 37
               

               Conread position:
               310-563
               

               Cow position:
               chr28:29434536-29434285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               134, 50
               

               Conread position:
               310-592
               

               Cow position:
               chr28:16346640-16346349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               310-605
               

               Cow position:
               chr28:2132034-2131740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 52
               

               Conread position:
               310-607
               

               Cow position:
               chr28:661997-662304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               134, 65
               

               Conread position:
               310-607
               

               Cow position:
               chr28:5437201-5436882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 182
               

               Conread position:
               310-608
               

               Cow position:
               chr28:3492898-3492582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               311-488
               

               Cow position:
               chr28:4587989-4588163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               311-508
               

               Cow position:
               chr28:21380768-21380967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               311-519
               

               Cow position:
               chr28:3449191-3449400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               311-526
               

               Cow position:
               chr28:11786822-11786612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               311-527
               

               Cow position:
               chr28:2872807-2873025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               311-531
               

               Cow position:
               chr28:5128836-5128618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               311-536
               

               Cow position:
               chr28:5577415-5577644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               311-536
               

               Cow position:
               chr28:26922477-26922253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               311-538
               

               Cow position:
               chr28:2752604-2752377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               61, 15
               

               Conread position:
               311-538
               

               Cow position:
               chr28:2960942-2960713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               311-538
               

               Cow position:
               chr28:4158848-4159072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 47
               

               Conread position:
               311-538
               

               Cow position:
               chr28:4355445-4355663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               311-538
               

               Cow position:
               chr28:5166656-5166884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               49, 88
               

               Conread position:
               311-538
               

               Cow position:
               chr28:7372231-7372005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               311-538
               

               Cow position:
               chr28:7416120-7415893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               131, 18
               

               Conread position:
               311-538
               

               Cow position:
               chr28:8140372-8140599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               311-538
               

               Cow position:
               chr28:9636563-9636340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               311-538
               

               Cow position:
               chr28:11079196-11079418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-538
               

               Cow position:
               chr28:11346594-11346370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               311-538
               

               Cow position:
               chr28:12672571-12672347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr28:12964459-12964684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr28:13474190-13474417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 85
               

               Conread position:
               311-538
               

               Cow position:
               chr28:21355113-21355348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 113
               

               Conread position:
               311-538
               

               Cow position:
               chr28:22345909-22346138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               311-538
               

               Cow position:
               chr28:24672155-24672382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 63
               

               Conread position:
               311-538
               

               Cow position:
               chr28:26220145-26220374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 175
               

               Conread position:
               311-538
               

               Cow position:
               chr28:26685004-26685228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 202
               

               Conread position:
               311-538
               

               Cow position:
               chr28:27218214-27218439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-538
               

               Cow position:
               chr28:33051918-33052153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 223
               

               Conread position:
               311-542
               

               Cow position:
               chr28:5817733-5817963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               133, 61
               

               Conread position:
               311-542
               

               Cow position:
               chr28:11687139-11686907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               63, 137
               

               Conread position:
               311-543
               

               Cow position:
               chr28:20313165-20313401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 85
               

               Conread position:
               311-544
               

               Cow position:
               chr28:11752251-11752016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               311-544
               

               Cow position:
               chr28:11829048-11828837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               203, 49
               

               Conread position:
               311-544
               

               Cow position:
               chr28:25806462-25806698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-545
               

               Cow position:
               chr28:24017887-24018111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               311-546
               

               Cow position:
               chr28:8022219-8021978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               311-548
               

               Cow position:
               chr28:4834952-4834718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               311-548
               

               Cow position:
               chr28:14512411-14512662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-551
               

               Cow position:
               chr28:19026122-19025873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-551
               

               Cow position:
               chr28:29199616-29199860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               311-551
               

               Cow position:
               chr28:32174519-32174761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-563
               

               Cow position:
               chr28:1538061-1538303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               131, 53
               

               Conread position:
               311-563
               

               Cow position:
               chr28:16085214-16085472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               50, 54
               

               Conread position:
               311-570
               

               Cow position:
               chr28:4308014-4307750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 236
               

               Conread position:
               311-578
               

               Cow position:
               chr28:20963639-20963375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               311-579
               

               Cow position:
               chr28:21598364-21598097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-583
               

               Cow position:
               chr28:6059575-6059311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               311-584
               

               Cow position:
               chr28:1632766-1632491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               311-603
               

               Cow position:
               chr28:5193210-5193523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 165
               

               Conread position:
               311-603
               

               Cow position:
               chr28:19564338-19564035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               311-603
               

               Cow position:
               chr28:23410435-23410134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               311-606
               

               Cow position:
               chr28:23007844-23007539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               311-607
               

               Cow position:
               chr28:5826840-5827135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               311-607
               

               Cow position:
               chr28:7439136-7439443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               311-607
               

               Cow position:
               chr28:8787429-8787743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 106
               

               Conread position:
               311-607
               

               Cow position:
               chr28:9426460-9426148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               311-607
               

               Cow position:
               chr28:11866775-11866464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               311-607
               

               Cow position:
               chr28:11884630-11884327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               311-607
               

               Cow position:
               chr28:13267676-13267973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 123
               

               Conread position:
               311-607
               

               Cow position:
               chr28:13290242-13289953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               311-607
               

               Cow position:
               chr28:16370186-16369885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               311-607
               

               Cow position:
               chr28:16919270-16918970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 25
               

               Conread position:
               311-607
               

               Cow position:
               chr28:23296213-23296523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               311-607
               

               Cow position:
               chr28:23676030-23676318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               311-607
               

               Cow position:
               chr28:23724565-23724265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-607
               

               Cow position:
               chr28:26719240-26719534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               311-607
               

               Cow position:
               chr28:30327201-30326897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               66, 161
               

               Conread position:
               311-607
               

               Cow position:
               chr28:30937773-30937479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 53
               

               Conread position:
               311-607
               

               Cow position:
               chr28:32365736-32366022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               311-607
               

               Cow position:
               chr28:34248133-34247839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               131, 61
               

               Conread position:
               311-608
               

               Cow position:
               chr28:4884373-4884048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               311-608
               

               Cow position:
               chr28:11426652-11426343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               311-608
               

               Cow position:
               chr28:11585315-11585004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-608
               

               Cow position:
               chr28:22371787-22371470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               312-496
               

               Cow position:
               chr28:12363270-12363083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               312-502
               

               Cow position:
               chr28:10057698-10057507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 83
               

               Conread position:
               312-502
               

               Cow position:
               chr28:12946839-12947029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               312-502
               

               Cow position:
               chr28:18625120-18625314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               312-537
               

               Cow position:
               chr28:8347622-8347847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 74
               

               Conread position:
               312-538
               

               Cow position:
               chr28:4282598-4282374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               312-601
               

               Cow position:
               chr28:3144000-3143687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 169
               

               Conread position:
               312-607
               

               Cow position:
               chr28:4070858-4071162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               312-607
               

               Cow position:
               chr28:7009086-7008777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 83
               

               Conread position:
               312-607
               

               Cow position:
               chr28:21502286-21502586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               312-608
               

               Cow position:
               chr28:10053442-10053127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               64, 95
               

               Conread position:
               313-502
               

               Cow position:
               chr28:10745104-10745294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               313-538
               

               Cow position:
               chr28:5144625-5144404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 24
               

               Conread position:
               314-526
               

               Cow position:
               chr28:20409285-20409492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               128, 60
               

               Conread position:
               314-538
               

               Cow position:
               chr28:22332428-22332645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 47
               

               Conread position:
               314-605
               

               Cow position:
               chr28:7865217-7865507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               52, 90
               

               Conread position:
               314-605
               

               Cow position:
               chr28:25056863-25057158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               315-607
               

               Cow position:
               chr28:6091257-6091560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               316-536
               

               Cow position:
               chr28:34133757-34133976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               77, 42
               

               Conread position:
               316-607
               

               Cow position:
               chr28:4090153-4089857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               318-534
               

               Cow position:
               chr28:16204432-16204222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               318-538
               

               Cow position:
               chr28:11818066-11817847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               126, 40
               

               Conread position:
               318-606
               

               Cow position:
               chr28:3746102-3746400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               318-606
               

               Cow position:
               chr28:26614781-26615056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               318-607
               

               Cow position:
               chr28:4881340-4881045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               319-459
               

               Cow position:
               chr28:7608082-7607938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               319-483
               

               Cow position:
               chr28:2737910-2737745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               319-526
               

               Cow position:
               chr28:25128781-25128991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               56, 154
               

               Conread position:
               319-533
               

               Cow position:
               chr28:12892536-12892325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               319-533
               

               Cow position:
               chr28:14649246-14649453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               319-537
               

               Cow position:
               chr28:5684608-5684818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               319-538
               

               Cow position:
               chr28:4181900-4182118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               319-538
               

               Cow position:
               chr28:12430505-12430721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               319-538
               

               Cow position:
               chr28:28163984-28164201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               57, 153
               

               Conread position:
               319-540
               

               Cow position:
               chr28:16246165-16245945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               319-549
               

               Cow position:
               chr28:11527361-11527132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               123, 54
               

               Conread position:
               319-551
               

               Cow position:
               chr28:33884306-33884533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               319-591
               

               Cow position:
               chr28:3914609-3914893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               319-607
               

               Cow position:
               chr28:11422918-11422615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 149
               

               Conread position:
               319-607
               

               Cow position:
               chr28:21844857-21845155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               319-608
               

               Cow position:
               chr28:9740364-9740663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               319-608
               

               Cow position:
               chr28:21868353-21868662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               56, 87
               

               Conread position:
               320-516
               

               Cow position:
               chr28:17071232-17071431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               320-544
               

               Cow position:
               chr28:34561249-34561466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               43, 22
               

               Conread position:
               320-603
               

               Cow position:
               chr28:5931252-5931544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               320-605
               

               Cow position:
               chr28:33163565-33163274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               320-607
               

               Cow position:
               chr28:5074611-5074317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               320-607
               

               Cow position:
               chr28:29416814-29416521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               321-546
               

               Cow position:
               chr28:18591173-18591395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               321-603
               

               Cow position:
               chr28:24082168-24082470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               322-607
               

               Cow position:
               chr28:4012990-4013287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               325-605
               

               Cow position:
               chr28:3275395-3275669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               326-538
               

               Cow position:
               chr28:26743528-26743743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               326-544
               

               Cow position:
               chr28:10172509-10172294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               326-602
               

               Cow position:
               chr28:1099755-1099478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               188, 33
               

               Conread position:
               328-540
               

               Cow position:
               chr28:8147955-8147744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               331-579
               

               Cow position:
               chr28:3740792-3741042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               331-606
               

               Cow position:
               chr28:7927084-7927364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               336-538
               

               Cow position:
               chr28:7388853-7388655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               336-538
               

               Cow position:
               chr28:25677432-25677224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               338-538
               

               Cow position:
               chr28:4045769-4045961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               338-608
               

               Cow position:
               chr28:7350574-7350855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               38, 55
               

               Conread position:
               338-608
               

               Cow position:
               chr28:10589106-10588828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               339-533
               

               Cow position:
               chr28:4179471-4179663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               339-607
               

               Cow position:
               chr28:10863869-10863596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               340-538
               

               Cow position:
               chr28:26531359-26531162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               340-543
               

               Cow position:
               chr28:12070154-12070354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               340-608
               

               Cow position:
               chr28:5139078-5138794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               345-484
               

               Cow position:
               chr28:7751379-7751239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               345-538
               

               Cow position:
               chr28:5236680-5236487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               345-538
               

               Cow position:
               chr28:6971427-6971231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               345-538
               

               Cow position:
               chr28:24966308-24966504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               345-608
               

               Cow position:
               chr28:7619229-7618955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               348-607
               

               Cow position:
               chr28:3411066-3410785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               348-608
               

               Cow position:
               chr28:4016459-4016728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               351-607
               

               Cow position:
               chr28:17012362-17012101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               352-607
               

               Cow position:
               chr28:3445553-3445275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               6, 67
               

               Conread position:
               353-551
               

               Cow position:
               chr28:20759770-20759572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               354-538
               

               Cow position:
               chr28:11348356-11348539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               359-538
               

               Cow position:
               chr28:16211164-16210984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               362-542
               

               Cow position:
               chr28:20397430-20397248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               362-607
               

               Cow position:
               chr28:10977785-10978042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               372-549
               

               Cow position:
               chr28:4438661-4438843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               373-538
               

               Cow position:
               chr28:9684380-9684217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               373-607
               

               Cow position:
               chr28:134118-133876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               373-608
               

               Cow position:
               chr28:2762146-2762377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               373-608
               

               Cow position:
               chr28:11987124-11987368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               67, 104
               

               Conread position:
               373-608
               

               Cow position:
               chr28:12055362-12055606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               67, 104
               

               Conread position:
               376-538
               

               Cow position:
               chr28:4873393-4873228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 86
               

               Conread position:
               377-591
               

               Cow position:
               chr28:7805468-7805257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               378-538
               

               Cow position:
               chr28:7498192-7498030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               378-607
               

               Cow position:
               chr28:10964379-10964612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               136, 20
               

               Conread position:
               384-608
               

               Cow position:
               chr28:10615984-10615745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               386-608
               

               Cow position:
               chr28:17739788-17740030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               388-608
               

               Cow position:
               chr28:11816702-11816479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               16, 197
               

               Conread position:
               391-579
               

               Cow position:
               chr28:4361482-4361300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 128
               

               Conread position:
               391-608
               

               Cow position:
               chr28:21008696-21008466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               394-538
               

               Cow position:
               chr28:10775741-10775594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               394-538
               

               Cow position:
               chr28:32179667-32179810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               395-500
               

               Cow position:
               chr28:17393748-17393855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               395-544
               

               Cow position:
               chr28:22148043-22147891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               395-555
               

               Cow position:
               chr28:12991108-12991276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               395-604
               

               Cow position:
               chr28:6975213-6975435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               395-608
               

               Cow position:
               chr28:5254845-5255076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               396-538
               

               Cow position:
               chr28:9705626-9705767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               396-608
               

               Cow position:
               chr28:5205244-5205456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               47, 162
               

               Conread position:
               398-607
               

               Cow position:
               chr28:4809754-4809974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 196
               

               Conread position:
               398-607
               

               Cow position:
               chr28:26372717-26372925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               398-608
               

               Cow position:
               chr28:7132111-7131886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               402-538
               

               Cow position:
               chr28:8149653-8149515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               402-603
               

               Cow position:
               chr28:8304226-8304442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               402-608
               

               Cow position:
               chr28:24646572-24646788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               404-607
               

               Cow position:
               chr28:4101501-4101716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               404-608
               

               Cow position:
               chr28:11016389-11016609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               405-533
               

               Cow position:
               chr28:4823586-4823714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 112
               

               Conread position:
               407-544
               

               Cow position:
               chr28:3397213-3397079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               411-608
               

               Cow position:
               chr28:29850827-29850617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               412-545
               

               Cow position:
               chr28:3147471-3147603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               414-608
               

               Cow position:
               chr28:5805662-5805867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               414-608
               

               Cow position:
               chr28:8396326-8396530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 160
               

               Conread position:
               417-576
               

               Cow position:
               chr28:25675511-25675355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 117
               

               Conread position:
               417-578
               

               Cow position:
               chr28:32358102-32358276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               417-579
               

               Cow position:
               chr28:16879567-16879741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               418-607
               

               Cow position:
               chr28:16214878-16214681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               419-607
               

               Cow position:
               chr28:30902122-30902325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               422-608
               

               Cow position:
               chr28:4876442-4876643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               423-538
               

               Cow position:
               chr28:7557734-7557617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               424-607
               

               Cow position:
               chr28:24996612-24996414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               424-608
               

               Cow position:
               chr28:26784240-26784051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               426-565
               

               Cow position:
               chr28:4051201-4051345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               428-538
               

               Cow position:
               chr28:10212422-10212310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               429-606
               

               Cow position:
               chr28:9109222-9109414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               13, 94
               

               Conread position:
               431-604
               

               Cow position:
               chr28:10890727-10890541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               445-607
               

               Cow position:
               chr28:3678385-3678563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               447-545
               

               Cow position:
               chr28:2151415-2151316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               451-607
               

               Cow position:
               chr28:17943759-17943928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               453-606
               

               Cow position:
               chr28:26868120-26867951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               457-607
               

               Cow position:
               chr28:8681395-8681233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               459-608
               

               Cow position:
               chr28:10762931-10763093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               464-603
               

               Cow position:
               chr28:11859508-11859371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 82
               

               Conread position:
               472-608
               

               Cow position:
               chr28:24238427-24238279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               42, 0
               
Show alignments to all cow chromosomes.
Conread position:	290-544
Cow position:	chr28:26982868-26982615 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	181
Alignm E-value:	8e-35
Alignm gaps (pig, cow):	86, 105
Conread position:	294-605
Cow position:	chr28:25249226-25249537 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	211
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	82, 103
Conread position:	295-482
Cow position:	chr28:3256669-3256858 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	142
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	5, 115
Conread position:	296-519
Cow position:	chr28:18186428-18186654 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	165
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	19, 124
Conread position:	296-562
Cow position:	chr28:7549185-7548918 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	164
Alignm E-value:	5e-40
Alignm gaps (pig, cow):	70, 99
Conread position:	296-605
Cow position:	chr28:616258-616571 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	209
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	78, 104
Conread position:	298-607
Cow position:	chr28:20124660-20124985 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	236
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	77, 97
Conread position:	299-538
Cow position:	chr28:9285497-9285260 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	184
Alignm E-value:	4.99997e-41
Alignm gaps (pig, cow):	16, 175
Conread position:	301-532
Cow position:	chr28:8408613-8408847 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	168
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	9, 96
Conread position:	301-533
Cow position:	chr28:15043982-15043750 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	171
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	141, 72
Conread position:	301-536
Cow position:	chr28:4138791-4138556 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	169
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	58, 99
Conread position:	301-551
Cow position:	chr28:34230109-34230358 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	173
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	9, 75
Conread position:	301-608
Cow position:	chr28:5204071-5204390 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	242
Alignm E-value:	0
Alignm gaps (pig, cow):	19, 97
Conread position:	302-556
Cow position:	chr28:3169314-3169054 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	181
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	74, 150
Conread position:	303-510
Cow position:	chr28:7512706-7512496 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	147
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	11, 0
Conread position:	305-608
Cow position:	chr28:3024028-3023711 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	229
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	98, 31
Conread position:	307-545
Cow position:	chr28:12619452-12619698 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	174
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	23, 202
Conread position:	308-516
Cow position:	chr28:3484464-3484674 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	145
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	66, 124
Conread position:	308-551
Cow position:	chr28:25728086-25728327 (view UCSC Genome Browser custom track)
Alignm length:	249
Alignm identity:	168
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	67, 85
Conread position:	309-533
Cow position:	chr28:14997952-14998178 (view UCSC Genome Browser custom track)
Alignm length:	228
Alignm identity:	164
Alignm E-value:	8e-35
Alignm gaps (pig, cow):	63, 217