Non-Coding RNA Search

Cow genome map


           Conread name:
           rche01_o13.y1
        

               Conread position:
               261-603
               

               Cow position:
               chr3:3889763-3889406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               288-538
               

               Cow position:
               chr3:10103885-10104128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               293-493
               

               Cow position:
               chr3:22820409-22820613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 114
               

               Conread position:
               293-578
               

               Cow position:
               chr3:64172286-64172565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 77
               

               Conread position:
               295-571
               

               Cow position:
               chr3:10347199-10347474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               296-538
               

               Cow position:
               chr3:83474591-83474833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               144, 62
               

               Conread position:
               298-530
               

               Cow position:
               chr3:72675940-72676171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 95
               

               Conread position:
               298-538
               

               Cow position:
               chr3:73708895-73709134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               299-607
               

               Cow position:
               chr3:74754176-74754490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               301-509
               

               Cow position:
               chr3:34937693-34937902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 153
               

               Conread position:
               301-538
               

               Cow position:
               chr3:19585711-19585951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               14, 170
               

               Conread position:
               301-544
               

               Cow position:
               chr3:17447759-17447521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               301-544
               

               Cow position:
               chr3:65413430-65413181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               301-591
               

               Cow position:
               chr3:48241466-48241766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 100
               

               Conread position:
               301-605
               

               Cow position:
               chr3:10958393-10958071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               301-607
               

               Cow position:
               chr3:39970018-39969688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               301-607
               

               Cow position:
               chr3:58765227-58764911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               301-608
               

               Cow position:
               chr3:22232802-22232492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 145
               

               Conread position:
               303-538
               

               Cow position:
               chr3:12712067-12711827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               303-607
               

               Cow position:
               chr3:18459669-18459362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               305-540
               

               Cow position:
               chr3:83815936-83815698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 189
               

               Conread position:
               305-604
               

               Cow position:
               chr3:68586875-68587191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 99
               

               Conread position:
               307-514
               

               Cow position:
               chr3:73759659-73759454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               307-532
               

               Cow position:
               chr3:55835968-55835739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               307-533
               

               Cow position:
               chr3:62826762-62826536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               307-538
               

               Cow position:
               chr3:22221176-22221415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               307-538
               

               Cow position:
               chr3:26681941-26681726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               308-521
               

               Cow position:
               chr3:78896507-78896716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               134, 65
               

               Conread position:
               308-544
               

               Cow position:
               chr3:63269080-63269317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 83
               

               Conread position:
               308-579
               

               Cow position:
               chr3:31350247-31349964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               308-597
               

               Cow position:
               chr3:27697119-27696835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 77
               

               Conread position:
               308-605
               

               Cow position:
               chr3:64281074-64280765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               68, 85
               

               Conread position:
               309-543
               

               Cow position:
               chr3:79196618-79196855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 64
               

               Conread position:
               309-607
               

               Cow position:
               chr3:15228960-15228666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               309-608
               

               Cow position:
               chr3:74584075-74584366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               310-439
               

               Cow position:
               chr3:77496679-77496816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               310-530
               

               Cow position:
               chr3:81371505-81371729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               310-537
               

               Cow position:
               chr3:55189898-55189666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               310-538
               

               Cow position:
               chr3:3738346-3738569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               310-542
               

               Cow position:
               chr3:55319042-55318807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               310-603
               

               Cow position:
               chr3:75105227-75104945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               310-607
               

               Cow position:
               chr3:3649356-3649064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               310-607
               

               Cow position:
               chr3:59473980-59474295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               310-608
               

               Cow position:
               chr3:26065861-26066163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               311-440
               

               Cow position:
               chr3:74409343-74409473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               311-502
               

               Cow position:
               chr3:34294424-34294217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-503
               

               Cow position:
               chr3:74878728-74878537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 82
               

               Conread position:
               311-503
               

               Cow position:
               chr3:76713463-76713273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 94
               

               Conread position:
               311-505
               

               Cow position:
               chr3:81359244-81359053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-508
               

               Cow position:
               chr3:66609982-66609787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-510
               

               Cow position:
               chr3:13890336-13890536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               311-512
               

               Cow position:
               chr3:11711822-11712026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 90
               

               Conread position:
               311-516
               

               Cow position:
               chr3:34871429-34871630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               311-523
               

               Cow position:
               chr3:75711172-75711379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 88
               

               Conread position:
               311-525
               

               Cow position:
               chr3:3638048-3638253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 88
               

               Conread position:
               311-528
               

               Cow position:
               chr3:76015152-76015369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               311-529
               

               Cow position:
               chr3:58969039-58968824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               311-529
               

               Cow position:
               chr3:72473773-72473993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               311-530
               

               Cow position:
               chr3:4031831-4032043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               311-530
               

               Cow position:
               chr3:61840137-61840355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 143
               

               Conread position:
               311-531
               

               Cow position:
               chr3:1517653-1517431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               311-531
               

               Cow position:
               chr3:53384422-53384199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               86, 23
               

               Conread position:
               311-531
               

               Cow position:
               chr3:74502459-74502244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               311-532
               

               Cow position:
               chr3:19006524-19006739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               311-532
               

               Cow position:
               chr3:67704403-67704628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-533
               

               Cow position:
               chr3:68627820-68627606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               311-534
               

               Cow position:
               chr3:62046523-62046748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               311-534
               

               Cow position:
               chr3:67930322-67930103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               311-536
               

               Cow position:
               chr3:1785381-1785159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               311-536
               

               Cow position:
               chr3:34669866-34669647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               311-536
               

               Cow position:
               chr3:53113034-53113261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               63, 95
               

               Conread position:
               311-536
               

               Cow position:
               chr3:57624326-57624550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               65, 19
               

               Conread position:
               311-537
               

               Cow position:
               chr3:210178-210406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               311-537
               

               Cow position:
               chr3:18066996-18067219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               311-537
               

               Cow position:
               chr3:56059667-56059898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               311-537
               

               Cow position:
               chr3:74079778-74079550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               64, 162
               

               Conread position:
               311-538
               

               Cow position:
               chr3:116059-116278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               131, 34
               

               Conread position:
               311-538
               

               Cow position:
               chr3:11063243-11063453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr3:11987189-11987417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               311-538
               

               Cow position:
               chr3:15506312-15506536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               311-538
               

               Cow position:
               chr3:17235348-17235129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               311-538
               

               Cow position:
               chr3:24468518-24468297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr3:26219189-26218965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               311-538
               

               Cow position:
               chr3:29596254-29596477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               144, 33
               

               Conread position:
               311-538
               

               Cow position:
               chr3:30179942-30180174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr3:30222048-30222279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr3:38691546-38691318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               311-538
               

               Cow position:
               chr3:44101832-44102055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-538
               

               Cow position:
               chr3:48900477-48900245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               311-538
               

               Cow position:
               chr3:49650247-49650476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               311-538
               

               Cow position:
               chr3:50768543-50768767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               311-538
               

               Cow position:
               chr3:53150189-53150419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               311-538
               

               Cow position:
               chr3:53508482-53508699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               311-538
               

               Cow position:
               chr3:54100860-54100638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr3:55085316-55085081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 60
               

               Conread position:
               311-538
               

               Cow position:
               chr3:55272186-55271957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               311-538
               

               Cow position:
               chr3:57760360-57760587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               65, 86
               

               Conread position:
               311-538
               

               Cow position:
               chr3:65969022-65969255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr3:66292316-66292088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 64
               

               Conread position:
               311-538
               

               Cow position:
               chr3:70565877-70565650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr3:70609487-70609714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               311-538
               

               Cow position:
               chr3:70899756-70899978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               311-538
               

               Cow position:
               chr3:71238017-71238241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-538
               

               Cow position:
               chr3:73394982-73395204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-538
               

               Cow position:
               chr3:74242856-74243080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               311-538
               

               Cow position:
               chr3:75046016-75045788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               64, 116
               

               Conread position:
               311-538
               

               Cow position:
               chr3:75050758-75050530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               311-538
               

               Cow position:
               chr3:76268118-76267887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               311-538
               

               Cow position:
               chr3:78093523-78093301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               311-538
               

               Cow position:
               chr3:80581525-80581743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               311-538
               

               Cow position:
               chr3:82461039-82461267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               311-539
               

               Cow position:
               chr3:2506615-2506390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-539
               

               Cow position:
               chr3:5097067-5097296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-539
               

               Cow position:
               chr3:21015099-21014867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               311-542
               

               Cow position:
               chr3:4319576-4319804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               311-542
               

               Cow position:
               chr3:8733494-8733267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               311-542
               

               Cow position:
               chr3:26920770-26921002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               311-542
               

               Cow position:
               chr3:66884079-66883851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-542
               

               Cow position:
               chr3:77581970-77582199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               311-544
               

               Cow position:
               chr3:17935073-17934845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               311-544
               

               Cow position:
               chr3:39171622-39171392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               311-544
               

               Cow position:
               chr3:48810776-48810550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               311-544
               

               Cow position:
               chr3:53739325-53739091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               61, 88
               

               Conread position:
               311-544
               

               Cow position:
               chr3:59884211-59883974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               311-544
               

               Cow position:
               chr3:76387738-76387514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               104, 51
               

               Conread position:
               311-544
               

               Cow position:
               chr3:80053678-80053448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               311-545
               

               Cow position:
               chr3:2216226-2216465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               311-545
               

               Cow position:
               chr3:55970367-55970601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               311-545
               

               Cow position:
               chr3:73820509-73820273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               131, 112
               

               Conread position:
               311-546
               

               Cow position:
               chr3:61143961-61144191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               205, 81
               

               Conread position:
               311-547
               

               Cow position:
               chr3:57764088-57764315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 79
               

               Conread position:
               311-547
               

               Cow position:
               chr3:77365437-77365191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 137
               

               Conread position:
               311-548
               

               Cow position:
               chr3:25754887-25755118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               311-550
               

               Cow position:
               chr3:59101690-59101927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 92
               

               Conread position:
               311-551
               

               Cow position:
               chr3:49790949-49790711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               311-551
               

               Cow position:
               chr3:52863323-52863082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               311-551
               

               Cow position:
               chr3:53046796-53046562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               311-556
               

               Cow position:
               chr3:59597044-59597286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               311-560
               

               Cow position:
               chr3:71497281-71497027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               311-570
               

               Cow position:
               chr3:7566558-7566286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               61, 23
               

               Conread position:
               311-570
               

               Cow position:
               chr3:72390946-72391202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               311-579
               

               Cow position:
               chr3:51234235-51233960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               311-579
               

               Cow position:
               chr3:52608048-52608325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               311-579
               

               Cow position:
               chr3:60597404-60597681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 33
               

               Conread position:
               311-599
               

               Cow position:
               chr3:38863976-38864285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-603
               

               Cow position:
               chr3:15052091-15051781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 160
               

               Conread position:
               311-603
               

               Cow position:
               chr3:54434835-54435139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               311-603
               

               Cow position:
               chr3:68145981-68145684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               131, 66
               

               Conread position:
               311-603
               

               Cow position:
               chr3:70895911-70896210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               311-603
               

               Cow position:
               chr3:74533213-74533505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               311-604
               

               Cow position:
               chr3:23169205-23168896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               311-605
               

               Cow position:
               chr3:2630655-2630933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               64, 92
               

               Conread position:
               311-605
               

               Cow position:
               chr3:24352721-24353013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               131, 65
               

               Conread position:
               311-605
               

               Cow position:
               chr3:37186691-37186981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               311-605
               

               Cow position:
               chr3:54506570-54506879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               311-605
               

               Cow position:
               chr3:68616464-68616162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               64, 33
               

               Conread position:
               311-605
               

               Cow position:
               chr3:79094187-79093888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               311-606
               

               Cow position:
               chr3:3883958-3883646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               311-606
               

               Cow position:
               chr3:12705685-12705373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               311-606
               

               Cow position:
               chr3:20802762-20802466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 125
               

               Conread position:
               311-606
               

               Cow position:
               chr3:74234057-74234355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               311-607
               

               Cow position:
               chr3:3985188-3985492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               311-607
               

               Cow position:
               chr3:4050055-4050356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               311-607
               

               Cow position:
               chr3:5365538-5365840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               311-607
               

               Cow position:
               chr3:5374195-5374484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               206, 62
               

               Conread position:
               311-607
               

               Cow position:
               chr3:8393212-8393514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 54
               

               Conread position:
               311-607
               

               Cow position:
               chr3:13329917-13329618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 95
               

               Conread position:
               311-607
               

               Cow position:
               chr3:15153553-15153863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               311-607
               

               Cow position:
               chr3:17331587-17331894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               64, 131
               

               Conread position:
               311-607
               

               Cow position:
               chr3:18686768-18687076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               311-607
               

               Cow position:
               chr3:19792754-19793072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 198
               

               Conread position:
               311-607
               

               Cow position:
               chr3:23105505-23105190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               311-607
               

               Cow position:
               chr3:24872576-24872867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               311-607
               

               Cow position:
               chr3:29813105-29813401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 90
               

               Conread position:
               311-607
               

               Cow position:
               chr3:44932373-44932687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 181
               

               Conread position:
               311-607
               

               Cow position:
               chr3:48252745-48253054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 64
               

               Conread position:
               311-607
               

               Cow position:
               chr3:50614498-50614798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 236
               

               Conread position:
               311-607
               

               Cow position:
               chr3:51578460-51578149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               311-607
               

               Cow position:
               chr3:53790676-53790367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 84
               

               Conread position:
               311-607
               

               Cow position:
               chr3:54945989-54946296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 258
               

               Conread position:
               311-607
               

               Cow position:
               chr3:55819611-55819924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               311-607
               

               Cow position:
               chr3:56476541-56476849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               133, 264
               

               Conread position:
               311-607
               

               Cow position:
               chr3:60264855-60264547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               311-607
               

               Cow position:
               chr3:60389628-60389928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               311-607
               

               Cow position:
               chr3:65058564-65058874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               311-607
               

               Cow position:
               chr3:70334103-70333794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               311-607
               

               Cow position:
               chr3:73467485-73467801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 23
               

               Conread position:
               311-607
               

               Cow position:
               chr3:75479863-75480173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 54
               

               Conread position:
               311-608
               

               Cow position:
               chr3:14598812-14599096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               311-608
               

               Cow position:
               chr3:15158902-15159205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 85
               

               Conread position:
               311-608
               

               Cow position:
               chr3:23408491-23408188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               311-608
               

               Cow position:
               chr3:27274392-27274703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               311-608
               

               Cow position:
               chr3:28908341-28908040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               311-608
               

               Cow position:
               chr3:29887561-29887264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 63
               

               Conread position:
               311-608
               

               Cow position:
               chr3:48073013-48072710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 18
               

               Conread position:
               311-608
               

               Cow position:
               chr3:48362945-48363245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               203, 42
               

               Conread position:
               311-608
               

               Cow position:
               chr3:59610860-59610543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               311-608
               

               Cow position:
               chr3:70762262-70761947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               64, 108
               

               Conread position:
               311-608
               

               Cow position:
               chr3:73915943-73915653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 76
               

               Conread position:
               312-500
               

               Cow position:
               chr3:17957327-17957516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               312-500
               

               Cow position:
               chr3:79220716-79220907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               312-502
               

               Cow position:
               chr3:25690654-25690844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               312-502
               

               Cow position:
               chr3:26489220-26489029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               312-502
               

               Cow position:
               chr3:39661588-39661406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               312-502
               

               Cow position:
               chr3:57754615-57754425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               103, 87
               

               Conread position:
               312-502
               

               Cow position:
               chr3:59034899-59035091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               54, 83
               

               Conread position:
               312-502
               

               Cow position:
               chr3:67929399-67929209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               312-510
               

               Cow position:
               chr3:64526710-64526907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               312-517
               

               Cow position:
               chr3:61539665-61539867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 93
               

               Conread position:
               312-526
               

               Cow position:
               chr3:53592832-53592614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               312-529
               

               Cow position:
               chr3:56515-56298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               64, 81
               

               Conread position:
               312-530
               

               Cow position:
               chr3:32787325-32787539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               312-538
               

               Cow position:
               chr3:2674890-2675117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               312-538
               

               Cow position:
               chr3:6689863-6690088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               312-538
               

               Cow position:
               chr3:17058678-17058458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               312-538
               

               Cow position:
               chr3:36375680-36375452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               312-538
               

               Cow position:
               chr3:59040429-59040656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 76
               

               Conread position:
               312-538
               

               Cow position:
               chr3:73460831-73461054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               312-607
               

               Cow position:
               chr3:14552740-14553047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               312-607
               

               Cow position:
               chr3:83490948-83491255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               312-608
               

               Cow position:
               chr3:67520310-67520000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               313-514
               

               Cow position:
               chr3:24935233-24935428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               129, 68
               

               Conread position:
               313-537
               

               Cow position:
               chr3:70334832-70334608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               313-538
               

               Cow position:
               chr3:9663308-9663084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               313-538
               

               Cow position:
               chr3:13301985-13301763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               313-538
               

               Cow position:
               chr3:31309491-31309266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               313-538
               

               Cow position:
               chr3:55712294-55712528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               313-538
               

               Cow position:
               chr3:59621782-59621560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 31
               

               Conread position:
               313-545
               

               Cow position:
               chr3:2025049-2025292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               47, 61
               

               Conread position:
               313-603
               

               Cow position:
               chr3:73764332-73764044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               313-605
               

               Cow position:
               chr3:14465848-14465542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               313-608
               

               Cow position:
               chr3:14601849-14601536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               314-496
               

               Cow position:
               chr3:56301480-56301313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               314-502
               

               Cow position:
               chr3:31206739-31206927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 60
               

               Conread position:
               314-517
               

               Cow position:
               chr3:25944948-25945159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               314-519
               

               Cow position:
               chr3:23445029-23444819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               314-533
               

               Cow position:
               chr3:49327805-49328026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 218
               

               Conread position:
               314-534
               

               Cow position:
               chr3:50069628-50069847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               200, 59
               

               Conread position:
               314-538
               

               Cow position:
               chr3:13507330-13507556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               314-538
               

               Cow position:
               chr3:60265378-60265166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               314-538
               

               Cow position:
               chr3:80071990-80072217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               314-542
               

               Cow position:
               chr3:8060991-8061219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               314-544
               

               Cow position:
               chr3:13353225-13353460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               61, 154
               

               Conread position:
               314-544
               

               Cow position:
               chr3:45534432-45534199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               314-544
               

               Cow position:
               chr3:71246890-71247115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               314-547
               

               Cow position:
               chr3:53270693-53270927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               61, 82
               

               Conread position:
               314-604
               

               Cow position:
               chr3:46541964-46541679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               128, 87
               

               Conread position:
               314-607
               

               Cow position:
               chr3:53221878-53222187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 80
               

               Conread position:
               314-608
               

               Cow position:
               chr3:4461627-4461314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               315-523
               

               Cow position:
               chr3:2396914-2396716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               197, 79
               

               Conread position:
               315-538
               

               Cow position:
               chr3:42423468-42423240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 119
               

               Conread position:
               315-538
               

               Cow position:
               chr3:72342109-72342333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               315-538
               

               Cow position:
               chr3:79645577-79645342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               315-603
               

               Cow position:
               chr3:26903981-26904270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 45
               

               Conread position:
               315-607
               

               Cow position:
               chr3:18393523-18393225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               315-607
               

               Cow position:
               chr3:61894304-61894008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               315-607
               

               Cow position:
               chr3:78077058-78077365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               316-607
               

               Cow position:
               chr3:73237060-73237358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               318-502
               

               Cow position:
               chr3:15954219-15954034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               318-516
               

               Cow position:
               chr3:49461062-49460861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 88
               

               Conread position:
               318-536
               

               Cow position:
               chr3:32184153-32183934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               318-538
               

               Cow position:
               chr3:66900868-66900645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               318-544
               

               Cow position:
               chr3:84175958-84175728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 86
               

               Conread position:
               318-563
               

               Cow position:
               chr3:84199544-84199792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 43
               

               Conread position:
               318-601
               

               Cow position:
               chr3:74846843-74846556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 56
               

               Conread position:
               319-524
               

               Cow position:
               chr3:7940687-7940483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               319-534
               

               Cow position:
               chr3:59799116-59799332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               319-537
               

               Cow position:
               chr3:20677966-20677755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               319-537
               

               Cow position:
               chr3:54782148-54781917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               66, 100
               

               Conread position:
               319-538
               

               Cow position:
               chr3:7661721-7661940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               319-538
               

               Cow position:
               chr3:15443861-15443641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 80
               

               Conread position:
               319-538
               

               Cow position:
               chr3:78092637-78092424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 18
               

               Conread position:
               319-541
               

               Cow position:
               chr3:71231266-71231486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 78
               

               Conread position:
               319-547
               

               Cow position:
               chr3:76155856-76156084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               57, 86
               

               Conread position:
               319-576
               

               Cow position:
               chr3:45647549-45647806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               319-583
               

               Cow position:
               chr3:17222275-17222010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               319-602
               

               Cow position:
               chr3:32585022-32585312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 33
               

               Conread position:
               319-604
               

               Cow position:
               chr3:61116989-61116700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 110
               

               Conread position:
               319-605
               

               Cow position:
               chr3:76922794-76922500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               319-607
               

               Cow position:
               chr3:525219-525501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               319-607
               

               Cow position:
               chr3:9641434-9641730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 85
               

               Conread position:
               319-608
               

               Cow position:
               chr3:55177882-55177575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               319-608
               

               Cow position:
               chr3:75080639-75080928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               320-531
               

               Cow position:
               chr3:55109747-55109532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               320-608
               

               Cow position:
               chr3:68708134-68707846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               320-608
               

               Cow position:
               chr3:68881242-68880955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               321-536
               

               Cow position:
               chr3:35056108-35055892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               321-544
               

               Cow position:
               chr3:16254953-16254747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               197, 35
               

               Conread position:
               321-544
               

               Cow position:
               chr3:80564834-80565061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               321-563
               

               Cow position:
               chr3:34270786-34271027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               321-608
               

               Cow position:
               chr3:51402779-51403072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               322-603
               

               Cow position:
               chr3:6873372-6873100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               322-603
               

               Cow position:
               chr3:54740017-54739729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               52, 149
               

               Conread position:
               322-607
               

               Cow position:
               chr3:14194307-14194015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               91, 8
               

               Conread position:
               323-545
               

               Cow position:
               chr3:26874465-26874685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               323-551
               

               Cow position:
               chr3:51033243-51033469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               119, 47
               

               Conread position:
               323-579
               

               Cow position:
               chr3:74600984-74601256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               324-502
               

               Cow position:
               chr3:58134814-58134635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 80
               

               Conread position:
               324-513
               

               Cow position:
               chr3:12670741-12670553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               324-538
               

               Cow position:
               chr3:35621176-35621389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 118
               

               Conread position:
               324-608
               

               Cow position:
               chr3:61224869-61224573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 34
               

               Conread position:
               325-608
               

               Cow position:
               chr3:59604725-59605018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               326-506
               

               Cow position:
               chr3:65800467-65800640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               116, 49
               

               Conread position:
               326-590
               

               Cow position:
               chr3:59000876-59000605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               326-607
               

               Cow position:
               chr3:3037055-3036766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 225
               

               Conread position:
               329-510
               

               Cow position:
               chr3:26992445-26992629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               331-607
               

               Cow position:
               chr3:15951031-15950742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               332-544
               

               Cow position:
               chr3:63177360-63177578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               332-579
               

               Cow position:
               chr3:38765787-38765551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               109, 63
               

               Conread position:
               334-531
               

               Cow position:
               chr3:72504015-72503815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               336-514
               

               Cow position:
               chr3:46108701-46108881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               336-538
               

               Cow position:
               chr3:78945949-78945751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 101
               

               Conread position:
               336-544
               

               Cow position:
               chr3:33693703-33693913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               336-606
               

               Cow position:
               chr3:64135603-64135871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               339-544
               

               Cow position:
               chr3:18059590-18059799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               340-535
               

               Cow position:
               chr3:28496717-28496918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               340-544
               

               Cow position:
               chr3:27727940-27727736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               52, 31
               

               Conread position:
               342-538
               

               Cow position:
               chr3:55983986-55984186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 142
               

               Conread position:
               342-608
               

               Cow position:
               chr3:57704214-57704508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               30, 147
               

               Conread position:
               344-544
               

               Cow position:
               chr3:52652188-52651985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 51
               

               Conread position:
               344-607
               

               Cow position:
               chr3:22165524-22165240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               31, 47
               

               Conread position:
               345-531
               

               Cow position:
               chr3:9116922-9117107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               345-538
               

               Cow position:
               chr3:16752365-16752171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               101, 126
               

               Conread position:
               345-544
               

               Cow position:
               chr3:3316918-3316722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               345-545
               

               Cow position:
               chr3:54290621-54290418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               345-603
               

               Cow position:
               chr3:31361313-31361594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               345-607
               

               Cow position:
               chr3:17936946-17936672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               107, 100
               

               Conread position:
               345-607
               

               Cow position:
               chr3:29360251-29359989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               345-607
               

               Cow position:
               chr3:45881798-45882074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               346-538
               

               Cow position:
               chr3:82019947-82019751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               346-603
               

               Cow position:
               chr3:44625268-44625008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               348-534
               

               Cow position:
               chr3:19626612-19626426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               349-536
               

               Cow position:
               chr3:32409109-32409298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               27, 47
               

               Conread position:
               353-514
               

               Cow position:
               chr3:54030181-54030344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               353-565
               

               Cow position:
               chr3:18001105-18001318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               89, 20
               

               Conread position:
               353-565
               

               Cow position:
               chr3:47753126-47753340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               21, 202
               

               Conread position:
               353-591
               

               Cow position:
               chr3:18607566-18607822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               354-543
               

               Cow position:
               chr3:58767163-58767358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               354-605
               

               Cow position:
               chr3:49363018-49363280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               356-538
               

               Cow position:
               chr3:3471943-3472128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               356-602
               

               Cow position:
               chr3:7337876-7337617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               358-538
               

               Cow position:
               chr3:15172987-15173169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               359-603
               

               Cow position:
               chr3:75608405-75608659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               361-538
               

               Cow position:
               chr3:19682604-19682785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 12
               

               Conread position:
               361-603
               

               Cow position:
               chr3:81881532-81881287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               362-538
               

               Cow position:
               chr3:27976614-27976436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               31, 41
               

               Conread position:
               362-607
               

               Cow position:
               chr3:31804848-31804595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               363-519
               

               Cow position:
               chr3:70614574-70614418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               372-538
               

               Cow position:
               chr3:2067814-2067982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               373-528
               

               Cow position:
               chr3:81277547-81277390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 30
               

               Conread position:
               373-532
               

               Cow position:
               chr3:69785703-69785542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               373-538
               

               Cow position:
               chr3:3478333-3478167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               69, 94
               

               Conread position:
               373-538
               

               Cow position:
               chr3:4480863-4481030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               373-538
               

               Cow position:
               chr3:10668956-10668791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               69, 21
               

               Conread position:
               373-538
               

               Cow position:
               chr3:22716378-22716209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               373-604
               

               Cow position:
               chr3:64196747-64196997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               373-608
               

               Cow position:
               chr3:59299499-59299749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               373-608
               

               Cow position:
               chr3:71474485-71474231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               373-608
               

               Cow position:
               chr3:76269820-76270064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               374-538
               

               Cow position:
               chr3:44330514-44330349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               375-538
               

               Cow position:
               chr3:53704041-53703876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 152
               

               Conread position:
               375-603
               

               Cow position:
               chr3:54982156-54981920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 27
               

               Conread position:
               377-579
               

               Cow position:
               chr3:84250617-84250405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               379-573
               

               Cow position:
               chr3:74802139-74801938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 65
               

               Conread position:
               381-532
               

               Cow position:
               chr3:20333937-20334089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               385-608
               

               Cow position:
               chr3:66975295-66975071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 12
               

               Conread position:
               387-607
               

               Cow position:
               chr3:75173643-75173425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               387-608
               

               Cow position:
               chr3:4548962-4549193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               55, 195
               

               Conread position:
               393-608
               

               Cow position:
               chr3:9120786-9121018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               394-607
               

               Cow position:
               chr3:3946980-3947211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               395-544
               

               Cow position:
               chr3:21997844-21997692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               395-607
               

               Cow position:
               chr3:3698602-3698819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 100
               

               Conread position:
               395-607
               

               Cow position:
               chr3:23132226-23131993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               395-607
               

               Cow position:
               chr3:53428972-53428743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               52, 22
               

               Conread position:
               395-608
               

               Cow position:
               chr3:71423608-71423393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               123, 41
               

               Conread position:
               396-533
               

               Cow position:
               chr3:50593969-50593832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               396-591
               

               Cow position:
               chr3:39988291-39988093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               138, 35
               

               Conread position:
               396-603
               

               Cow position:
               chr3:40100772-40100558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               396-608
               

               Cow position:
               chr3:6182278-6182057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               397-538
               

               Cow position:
               chr3:51349768-51349911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               397-545
               

               Cow position:
               chr3:41652321-41652471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               398-538
               

               Cow position:
               chr3:68004756-68004614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               398-543
               

               Cow position:
               chr3:82629262-82629412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               398-546
               

               Cow position:
               chr3:69650943-69650792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               398-579
               

               Cow position:
               chr3:67626397-67626213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               399-538
               

               Cow position:
               chr3:64648439-64648580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               399-559
               

               Cow position:
               chr3:11292299-11292138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 11
               

               Conread position:
               399-570
               

               Cow position:
               chr3:83845865-83846030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 10
               

               Conread position:
               399-607
               

               Cow position:
               chr3:20841926-20841704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               400-563
               

               Cow position:
               chr3:56704373-56704209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               42, 151
               

               Conread position:
               400-606
               

               Cow position:
               chr3:8349617-8349397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               9, 18
               

               Conread position:
               401-545
               

               Cow position:
               chr3:53084039-53083891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               401-552
               

               Cow position:
               chr3:16601393-16601543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               401-607
               

               Cow position:
               chr3:44961055-44960843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 32
               

               Conread position:
               401-608
               

               Cow position:
               chr3:29828199-29827991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 137
               

               Conread position:
               402-538
               

               Cow position:
               chr3:5305748-5305886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               402-563
               

               Cow position:
               chr3:10026735-10026572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               112, 40
               

               Conread position:
               402-607
               

               Cow position:
               chr3:53904407-53904610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 80
               

               Conread position:
               403-570
               

               Cow position:
               chr3:82174108-82173936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               403-579
               

               Cow position:
               chr3:16505524-16505340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 63
               

               Conread position:
               404-607
               

               Cow position:
               chr3:75107726-75107947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               405-538
               

               Cow position:
               chr3:38100094-38100231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               405-544
               

               Cow position:
               chr3:26603602-26603458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               405-607
               

               Cow position:
               chr3:71703430-71703633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               407-538
               

               Cow position:
               chr3:35624589-35624458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 10
               

               Conread position:
               412-538
               

               Cow position:
               chr3:82123588-82123459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               418-570
               

               Cow position:
               chr3:40961532-40961689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               96, 28
               

               Conread position:
               418-608
               

               Cow position:
               chr3:22924409-22924204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               420-538
               

               Cow position:
               chr3:24371890-24372009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               423-551
               

               Cow position:
               chr3:35238984-35239113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               423-604
               

               Cow position:
               chr3:20021240-20021440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               424-608
               

               Cow position:
               chr3:67407394-67407191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               425-607
               

               Cow position:
               chr3:22092122-22092300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               428-538
               

               Cow position:
               chr3:19788854-19788742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               430-606
               

               Cow position:
               chr3:31115292-31115104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               430-607
               

               Cow position:
               chr3:27246981-27246792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               431-608
               

               Cow position:
               chr3:73701483-73701674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 178
               

               Conread position:
               441-603
               

               Cow position:
               chr3:3818774-3818935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 53
               

               Conread position:
               445-575
               

               Cow position:
               chr3:28556168-28556039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               445-606
               

               Cow position:
               chr3:74069590-74069748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               445-607
               

               Cow position:
               chr3:6900909-6901071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 84
               

               Conread position:
               445-607
               

               Cow position:
               chr3:11715991-11716154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 89
               

               Conread position:
               445-607
               

               Cow position:
               chr3:32127411-32127244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               445-608
               

               Cow position:
               chr3:19709104-19709281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               445-608
               

               Cow position:
               chr3:56943932-56943754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               446-545
               

               Cow position:
               chr3:17531743-17531643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               446-607
               

               Cow position:
               chr3:52845551-52845730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               447-544
               

               Cow position:
               chr3:27670409-27670507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               448-607
               

               Cow position:
               chr3:25082421-25082262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 88
               

               Conread position:
               451-607
               

               Cow position:
               chr3:49789583-49789422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 153
               

               Conread position:
               452-570
               

               Cow position:
               chr3:73514047-73513928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               455-608
               

               Cow position:
               chr3:74050698-74050530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               456-579
               

               Cow position:
               chr3:22094594-22094470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               456-608
               

               Cow position:
               chr3:15070104-15069950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 95
               

               Conread position:
               456-608
               

               Cow position:
               chr3:24774658-24774818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               478-608
               

               Cow position:
               chr3:59635339-59635479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               484-607
               

               Cow position:
               chr3:24370434-24370566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               32, 0
               
Show alignments to all cow chromosomes.
Conread position:	261-603
Cow position:	chr3:3889763-3889406 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	244
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	27, 116
Conread position:	288-538
Cow position:	chr3:10103885-10104128 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	174
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	12, 41
Conread position:	293-493
Cow position:	chr3:22820409-22820613 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	143
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	7, 114
Conread position:	293-578
Cow position:	chr3:64172286-64172565 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	188
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	7, 77
Conread position:	295-571
Cow position:	chr3:10347199-10347474 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	212
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	20, 99
Conread position:	296-538
Cow position:	chr3:83474591-83474833 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	171
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	144, 62
Conread position:	298-530
Cow position:	chr3:72675940-72676171 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	161
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	76, 95
Conread position:	298-538
Cow position:	chr3:73708895-73709134 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	175
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	21, 48
Conread position:	299-607
Cow position:	chr3:74754176-74754490 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	223
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	16, 47
Conread position:	301-509
Cow position:	chr3:34937693-34937902 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	146
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	9, 153
Conread position:	301-538
Cow position:	chr3:19585711-19585951 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	180
Alignm E-value:	4.99983e-42
Alignm gaps (pig, cow):	14, 170
Conread position:	301-544
Cow position:	chr3:17447759-17447521 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	181
Alignm E-value:	3e-36
Alignm gaps (pig, cow):	15, 64
Conread position:	301-591
Cow position:	chr3:48241466-48241766 (view UCSC Genome Browser custom track)
Alignm length:	307
Alignm identity:	212
Alignm E-value:	4e-30
Alignm gaps (pig, cow):	9, 100
Conread position:	301-605
Cow position:	chr3:10958393-10958071 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	235
Alignm E-value:	0
Alignm gaps (pig, cow):	14, 0
Conread position:	301-607
Cow position:	chr3:39970018-39969688 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	232
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	14, 97
Conread position:	301-608
Cow position:	chr3:22232802-22232492 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	237
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 145
Conread position:	303-538
Cow position:	chr3:12712067-12711827 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	173
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	11, 0
Conread position:	303-607
Cow position:	chr3:18459669-18459362 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	212
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	16, 89
Conread position:	305-540
Cow position:	chr3:83815936-83815698 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	170
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	10, 189
Conread position:	305-604
Cow position:	chr3:68586875-68587191 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	220
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	71, 99