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Cow genome map

           
Conread name:
           
rche01_o13.y1
        

               
Conread position:
               
279-539
               

               
Cow position:
               
chr9:32669771-32670031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
286-603
               

               
Cow position:
               
chr9:51720729-51721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
289-603
               

               
Cow position:
               
chr9:33668893-33668578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
290-516
               

               
Cow position:
               
chr9:8534525-8534750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
154, 83
               

               
Conread position:
               
290-544
               

               
Cow position:
               
chr9:50543255-50543516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 239
               

               
Conread position:
               
295-544
               

               
Cow position:
               
chr9:54716452-54716691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
223, 48
               

               
Conread position:
               
296-607
               

               
Cow position:
               
chr9:20579445-20579758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
299-538
               

               
Cow position:
               
chr9:61022768-61022540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 96
               

               
Conread position:
               
299-606
               

               
Cow position:
               
chr9:34286958-34286629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
301-510
               

               
Cow position:
               
chr9:35904590-35904799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
301-538
               

               
Cow position:
               
chr9:9199628-9199862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
301-538
               

               
Cow position:
               
chr9:41728412-41728177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
301-538
               

               
Cow position:
               
chr9:62656952-62656720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
301-545
               

               
Cow position:
               
chr9:5246011-5245763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
301-551
               

               
Cow position:
               
chr9:20416359-20416603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
301-603
               

               
Cow position:
               
chr9:9595799-9596116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
301-603
               

               
Cow position:
               
chr9:41679901-41679596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
301-608
               

               
Cow position:
               
chr9:9516613-9516919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
302-538
               

               
Cow position:
               
chr9:11319480-11319717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
303-537
               

               
Cow position:
               
chr9:30402267-30402508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
303-608
               

               
Cow position:
               
chr9:5263653-5263333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
304-544
               

               
Cow position:
               
chr9:34284099-34283865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
305-494
               

               
Cow position:
               
chr9:35850050-35849866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
305-538
               

               
Cow position:
               
chr9:17740797-17741024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
137, 64
               

               
Conread position:
               
307-551
               

               
Cow position:
               
chr9:28726572-28726826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
308-538
               

               
Cow position:
               
chr9:62668398-62668167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
308-555
               

               
Cow position:
               
chr9:6596087-6596332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
308-603
               

               
Cow position:
               
chr9:5442139-5441845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
309-538
               

               
Cow position:
               
chr9:52513306-52513530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
133, 66
               

               
Conread position:
               
309-544
               

               
Cow position:
               
chr9:42445833-42446073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
309-607
               

               
Cow position:
               
chr9:1867596-1867301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
310-477
               

               
Cow position:
               
chr9:22361159-22360989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
310-538
               

               
Cow position:
               
chr9:39681485-39681256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
310-538
               

               
Cow position:
               
chr9:56773227-56772993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
310-538
               

               
Cow position:
               
chr9:60110386-60110167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
310-540
               

               
Cow position:
               
chr9:23430998-23431232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
310-544
               

               
Cow position:
               
chr9:55287752-55287980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
310-551
               

               
Cow position:
               
chr9:9405903-9406149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
310-557
               

               
Cow position:
               
chr9:24872979-24872735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
310-579
               

               
Cow position:
               
chr9:17799777-17799496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
310-592
               

               
Cow position:
               
chr9:29006710-29006404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
310-601
               

               
Cow position:
               
chr9:30124068-30123766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
310-604
               

               
Cow position:
               
chr9:55321783-55321487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
310-606
               

               
Cow position:
               
chr9:11123337-11123649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
311-486
               

               
Cow position:
               
chr9:38344035-38343860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
311-503
               

               
Cow position:
               
chr9:35375572-35375379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
311-511
               

               
Cow position:
               
chr9:22114490-22114690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr9:43937084-43936887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr9:49709982-49709789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 49
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr9:24997375-24997580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
311-525
               

               
Cow position:
               
chr9:29684292-29684074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
311-528
               

               
Cow position:
               
chr9:49417131-49416914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr9:3220281-3220060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
311-532
               

               
Cow position:
               
chr9:46316641-46316858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr9:767008-767227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr9:13169519-13169740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr9:44831910-44832129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
311-534
               

               
Cow position:
               
chr9:45285385-45285614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr9:35167316-35167095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr9:4646183-4646406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr9:9443453-9443683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr9:12225839-12226059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 49
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr9:32371616-32371833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
64, 72
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:4262948-4263172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:5763489-5763713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
131, 60
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:6840146-6839910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:7634418-7634188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:7953044-7952818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:8723937-8723711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:8901079-8901309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:9654167-9654390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:9753249-9753473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:9815559-9815330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:11313367-11313597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:15805781-15806006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:18216959-18217182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:21888312-21888087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:22443483-22443710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 88
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:23388533-23388755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
131, 150
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:25804978-25804748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:31814230-31814469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:35105646-35105873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:41394510-41394730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:44467208-44467424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
171, 64
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:47445883-47446098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:50080902-50081123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 75
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:50139428-50139202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:64050416-64050644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 92
               

               
Conread position:
               
311-538
               

               
Cow position:
               
chr9:64559740-64559965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
311-539
               

               
Cow position:
               
chr9:17411048-17411277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
311-539
               

               
Cow position:
               
chr9:27279453-27279225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
311-540
               

               
Cow position:
               
chr9:33119741-33119974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
311-540
               

               
Cow position:
               
chr9:49293001-49293228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
311-541
               

               
Cow position:
               
chr9:5509866-5509641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
311-541
               

               
Cow position:
               
chr9:19493318-19493552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
311-541
               

               
Cow position:
               
chr9:44914944-44915182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr9:7363167-7362941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
311-543
               

               
Cow position:
               
chr9:17310418-17310650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
65, 157
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr9:30652560-30652798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 172
               

               
Conread position:
               
311-544
               

               
Cow position:
               
chr9:51204865-51204643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
311-545
               

               
Cow position:
               
chr9:3738077-3738314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr9:26477360-26477119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr9:28354663-28354421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr9:29184988-29185233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr9:59386631-59386865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 24
               

               
Conread position:
               
311-551
               

               
Cow position:
               
chr9:62357384-62357624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
311-553
               

               
Cow position:
               
chr9:54528656-54528416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
311-556
               

               
Cow position:
               
chr9:43443940-43443700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
311-565
               

               
Cow position:
               
chr9:29191489-29191237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
311-576
               

               
Cow position:
               
chr9:48106974-48107250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
311-578
               

               
Cow position:
               
chr9:5327400-5327124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
311-579
               

               
Cow position:
               
chr9:26403929-26403656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
311-579
               

               
Cow position:
               
chr9:32732545-32732803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
311-601
               

               
Cow position:
               
chr9:388872-389161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 64
               

               
Conread position:
               
311-603
               

               
Cow position:
               
chr9:52407311-52407004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
311-606
               

               
Cow position:
               
chr9:5456033-5456341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
311-606
               

               
Cow position:
               
chr9:11299546-11299842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
311-606
               

               
Cow position:
               
chr9:34468439-34468728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
131, 58
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:4341025-4341326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:5209725-5209432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:5433782-5433475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:5501002-5500694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:6851924-6852221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:6879910-6879630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:8628778-8629082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:8998501-8998183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
65, 276
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:9403031-9403341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:11168874-11168575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:22318491-22318191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:25557110-25556813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:43757682-43757374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:54681649-54681351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:55256406-55256719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
67, 100
               

               
Conread position:
               
311-607
               

               
Cow position:
               
chr9:58979542-58979234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr9:20848076-20847775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 165
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr9:28747379-28747689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr9:39011332-39011638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr9:45141457-45141767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
311-608
               

               
Cow position:
               
chr9:50606804-50607101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 92
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr9:1756001-1756189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr9:21030452-21030264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr9:44833823-44834007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
312-502
               

               
Cow position:
               
chr9:26440659-26440858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
312-510
               

               
Cow position:
               
chr9:47590841-47591035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr9:15225155-15225372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr9:47906137-47906355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr9:10819689-10819911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr9:18381002-18380782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr9:41283158-41282932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr9:45756504-45756280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr9:55074990-55075211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr9:11303938-11304162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
312-543
               

               
Cow position:
               
chr9:1973085-1972860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
312-579
               

               
Cow position:
               
chr9:47500066-47500339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
312-606
               

               
Cow position:
               
chr9:17871963-17872276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr9:7409921-7409607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 276
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr9:42264350-42264051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
132, 70
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr9:44709968-44709663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
205, 86
               

               
Conread position:
               
312-607
               

               
Cow position:
               
chr9:62940901-62941191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
312-608
               

               
Cow position:
               
chr9:5227027-5227331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
313-537
               

               
Cow position:
               
chr9:3782502-3782288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
201, 61
               

               
Conread position:
               
313-537
               

               
Cow position:
               
chr9:33598123-33597904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
313-538
               

               
Cow position:
               
chr9:63745953-63745732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
313-540
               

               
Cow position:
               
chr9:16300424-16300654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
313-544
               

               
Cow position:
               
chr9:36843929-36843704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
313-544
               

               
Cow position:
               
chr9:61997457-61997692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 64
               

               
Conread position:
               
313-607
               

               
Cow position:
               
chr9:3387833-3387546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
314-538
               

               
Cow position:
               
chr9:1520596-1520822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
314-538
               

               
Cow position:
               
chr9:31078941-31079162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
314-579
               

               
Cow position:
               
chr9:34957913-34958191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
314-607
               

               
Cow position:
               
chr9:13670774-13670466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
314-608
               

               
Cow position:
               
chr9:56453470-56453175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
200, 42
               

               
Conread position:
               
315-538
               

               
Cow position:
               
chr9:9461515-9461737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
315-545
               

               
Cow position:
               
chr9:3186268-3186036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
315-606
               

               
Cow position:
               
chr9:41486100-41486383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 185
               

               
Conread position:
               
317-536
               

               
Cow position:
               
chr9:13743794-13744011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
318-492
               

               
Cow position:
               
chr9:43013861-43013686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 86
               

               
Conread position:
               
318-536
               

               
Cow position:
               
chr9:51566357-51566576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 57
               

               
Conread position:
               
318-537
               

               
Cow position:
               
chr9:42062249-42062017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
318-538
               

               
Cow position:
               
chr9:824096-823879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
318-538
               

               
Cow position:
               
chr9:21460015-21460234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
318-538
               

               
Cow position:
               
chr9:33114484-33114263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 134
               

               
Conread position:
               
318-544
               

               
Cow position:
               
chr9:52839749-52839970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
318-591
               

               
Cow position:
               
chr9:43871116-43870841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 226
               

               
Conread position:
               
318-603
               

               
Cow position:
               
chr9:28983322-28983034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
318-607
               

               
Cow position:
               
chr9:34410258-34410563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
318-608
               

               
Cow position:
               
chr9:26279034-26279344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
319-511
               

               
Cow position:
               
chr9:43875577-43875774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
319-537
               

               
Cow position:
               
chr9:48628164-48627946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:1938268-1938041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:5219032-5219255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:8562974-8562739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:12910265-12910486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:13205431-13205649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:31359737-31359521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr9:59013197-59013422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
319-540
               

               
Cow position:
               
chr9:60394914-60395134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
319-543
               

               
Cow position:
               
chr9:36490755-36490989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr9:4267847-4268075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 65
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr9:33940741-33940517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr9:38793150-38792925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
319-544
               

               
Cow position:
               
chr9:40005612-40005386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
319-545
               

               
Cow position:
               
chr9:10144340-10144565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
319-547
               

               
Cow position:
               
chr9:52267620-52267847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
319-563
               

               
Cow position:
               
chr9:26310639-26310397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
319-563
               

               
Cow position:
               
chr9:64091821-64091563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
319-579
               

               
Cow position:
               
chr9:52578400-52578677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
319-603
               

               
Cow position:
               
chr9:6192326-6192623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
319-605
               

               
Cow position:
               
chr9:53762834-53762531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr9:19555510-19555219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr9:24887336-24887035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 92
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr9:26344832-26345132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
319-607
               

               
Cow position:
               
chr9:51620574-51620274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
319-608
               

               
Cow position:
               
chr9:6189235-6189534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 77
               

               
Conread position:
               
319-608
               

               
Cow position:
               
chr9:36628240-36627951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
319-608
               

               
Cow position:
               
chr9:61303140-61302832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
320-538
               

               
Cow position:
               
chr9:44396795-44396579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
321-538
               

               
Cow position:
               
chr9:10118530-10118736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
321-544
               

               
Cow position:
               
chr9:38846209-38846423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
321-550
               

               
Cow position:
               
chr9:58670866-58670647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
220, 35
               

               
Conread position:
               
322-579
               

               
Cow position:
               
chr9:57896985-57897242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
322-607
               

               
Cow position:
               
chr9:8636803-8636508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
323-535
               

               
Cow position:
               
chr9:60027334-60027117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
326-538
               

               
Cow position:
               
chr9:9552222-9552008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 206
               

               
Conread position:
               
326-538
               

               
Cow position:
               
chr9:34374806-34375007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
330-528
               

               
Cow position:
               
chr9:49689082-49688890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
181, 43
               

               
Conread position:
               
330-544
               

               
Cow position:
               
chr9:29339199-29339403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
336-538
               

               
Cow position:
               
chr9:9311979-9311775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
336-608
               

               
Cow position:
               
chr9:6952226-6951941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
337-538
               

               
Cow position:
               
chr9:3343861-3343666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
338-531
               

               
Cow position:
               
chr9:53109370-53109175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
338-591
               

               
Cow position:
               
chr9:64106024-64105749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
338-607
               

               
Cow position:
               
chr9:33584565-33584854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
339-538
               

               
Cow position:
               
chr9:19903196-19902999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
339-538
               

               
Cow position:
               
chr9:54493254-54493052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
339-591
               

               
Cow position:
               
chr9:21080679-21080419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
339-603
               

               
Cow position:
               
chr9:20465843-20466110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
340-547
               

               
Cow position:
               
chr9:42478367-42478574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
340-607
               

               
Cow position:
               
chr9:3378868-3378592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
340-607
               

               
Cow position:
               
chr9:17840561-17840849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
342-608
               

               
Cow position:
               
chr9:23955870-23956148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
344-534
               

               
Cow position:
               
chr9:32981960-32982154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
345-533
               

               
Cow position:
               
chr9:18342841-18342655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
345-544
               

               
Cow position:
               
chr9:55889921-55889726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
345-551
               

               
Cow position:
               
chr9:5077604-5077801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
169, 17
               

               
Conread position:
               
345-607
               

               
Cow position:
               
chr9:20091158-20090890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
346-601
               

               
Cow position:
               
chr9:28754929-28754670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 207
               

               
Conread position:
               
348-538
               

               
Cow position:
               
chr9:45171111-45171306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
348-550
               

               
Cow position:
               
chr9:55532922-55532718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 55
               

               
Conread position:
               
351-544
               

               
Cow position:
               
chr9:19067889-19067693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
352-608
               

               
Cow position:
               
chr9:59997929-59998201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
353-579
               

               
Cow position:
               
chr9:21387523-21387291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
355-538
               

               
Cow position:
               
chr9:54615201-54615383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
356-570
               

               
Cow position:
               
chr9:29194923-29195141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
356-607
               

               
Cow position:
               
chr9:9460075-9459819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
356-608
               

               
Cow position:
               
chr9:58451980-58452241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
357-531
               

               
Cow position:
               
chr9:33823217-33823042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
357-544
               

               
Cow position:
               
chr9:9624912-9625102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
358-538
               

               
Cow position:
               
chr9:64064259-64064446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
359-530
               

               
Cow position:
               
chr9:61351241-61351413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
360-538
               

               
Cow position:
               
chr9:9686319-9686495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
360-544
               

               
Cow position:
               
chr9:44770104-44770282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
361-544
               

               
Cow position:
               
chr9:53750862-53751051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
362-608
               

               
Cow position:
               
chr9:13460325-13460579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 89
               

               
Conread position:
               
374-544
               

               
Cow position:
               
chr9:30780195-30780029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
374-544
               

               
Cow position:
               
chr9:34024782-34024609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
375-538
               

               
Cow position:
               
chr9:24652491-24652321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
375-555
               

               
Cow position:
               
chr9:23797318-23797135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
375-608
               

               
Cow position:
               
chr9:9689580-9689352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
375-608
               

               
Cow position:
               
chr9:41785291-41785050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
387-544
               

               
Cow position:
               
chr9:49545298-49545453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
387-603
               

               
Cow position:
               
chr9:52828727-52828516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
387-607
               

               
Cow position:
               
chr9:57131565-57131328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
387-608
               

               
Cow position:
               
chr9:63361649-63361882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
390-544
               

               
Cow position:
               
chr9:52518756-52518914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
393-607
               

               
Cow position:
               
chr9:44584657-44584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
394-538
               

               
Cow position:
               
chr9:16137280-16137425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
394-565
               

               
Cow position:
               
chr9:27347860-27347693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
394-607
               

               
Cow position:
               
chr9:42586491-42586718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
395-579
               

               
Cow position:
               
chr9:25400141-25400326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
395-603
               

               
Cow position:
               
chr9:4580341-4580550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
5, 182
               

               
Conread position:
               
396-544
               

               
Cow position:
               
chr9:39758579-39758429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
396-545
               

               
Cow position:
               
chr9:5104342-5104492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
398-603
               

               
Cow position:
               
chr9:43159811-43159589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
399-579
               

               
Cow position:
               
chr9:59835015-59834833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
399-607
               

               
Cow position:
               
chr9:48017039-48016819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
400-607
               

               
Cow position:
               
chr9:37199184-37198957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
401-533
               

               
Cow position:
               
chr9:6685955-6685821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
401-599
               

               
Cow position:
               
chr9:18439117-18439317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
401-608
               

               
Cow position:
               
chr9:33101066-33101276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
402-514
               

               
Cow position:
               
chr9:38799431-38799544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
402-538
               

               
Cow position:
               
chr9:19758774-19758637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
402-538
               

               
Cow position:
               
chr9:31098829-31098969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
402-540
               

               
Cow position:
               
chr9:62907967-62908104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
402-601
               

               
Cow position:
               
chr9:5756934-5757141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
402-607
               

               
Cow position:
               
chr9:33151797-33151579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
402-607
               

               
Cow position:
               
chr9:52763705-52763923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
403-603
               

               
Cow position:
               
chr9:7805907-7806120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
406-538
               

               
Cow position:
               
chr9:6293646-6293512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
408-538
               

               
Cow position:
               
chr9:1733392-1733261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
408-538
               

               
Cow position:
               
chr9:55354660-55354528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
410-537
               

               
Cow position:
               
chr9:34014202-34014331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
410-540
               

               
Cow position:
               
chr9:34484642-34484510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
410-603
               

               
Cow position:
               
chr9:13742570-13742372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
412-538
               

               
Cow position:
               
chr9:61547743-61547620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
412-563
               

               
Cow position:
               
chr9:60355167-60355323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
413-544
               

               
Cow position:
               
chr9:59699503-59699637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
414-603
               

               
Cow position:
               
chr9:11098413-11098617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
417-544
               

               
Cow position:
               
chr9:22165673-22165801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
417-607
               

               
Cow position:
               
chr9:3924483-3924285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
420-538
               

               
Cow position:
               
chr9:35793715-35793594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
422-574
               

               
Cow position:
               
chr9:18226700-18226853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 135
               

               
Conread position:
               
426-545
               

               
Cow position:
               
chr9:43202365-43202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
432-607
               

               
Cow position:
               
chr9:19718315-19718504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
433-544
               

               
Cow position:
               
chr9:26277852-26277740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
433-603
               

               
Cow position:
               
chr9:24079326-24079139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
434-568
               

               
Cow position:
               
chr9:53496731-53496866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
439-603
               

               
Cow position:
               
chr9:52648840-52649012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
445-605
               

               
Cow position:
               
chr9:5259286-5259127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
445-606
               

               
Cow position:
               
chr9:34917174-34917346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
446-601
               

               
Cow position:
               
chr9:32773223-32773058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
453-605
               

               
Cow position:
               
chr9:34666444-34666284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
453-607
               

               
Cow position:
               
chr9:39654409-39654255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
457-608
               

               
Cow position:
               
chr9:5358010-5357850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
458-608
               

               
Cow position:
               
chr9:33399085-33398935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
467-608
               

               
Cow position:
               
chr9:26493798-26493649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               
Show alignments to all cow chromosomes.