Cow genome map


           Conread name:
           rche12_e12.y1
        

               Conread position:
               1-273
               

               Cow position:
               chr25:33299343-33299617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 5
               

               Conread position:
               2-238
               

               Cow position:
               chr25:33157030-33156791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               2-291
               

               Cow position:
               chr25:33299006-33299299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 206
               

               Conread position:
               2-318
               

               Cow position:
               chr25:33127825-33128148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               2-325
               

               Cow position:
               chr25:34769765-34769435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               3-264
               

               Cow position:
               chr25:33145122-33145387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-312
               

               Cow position:
               chr25:33127742-33128056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               6-175
               

               Cow position:
               chr25:36801739-36801910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 31
               

               Conread position:
               14-318
               

               Cow position:
               chr25:34769920-34769610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 196
               

               Conread position:
               20-235
               

               Cow position:
               chr25:36801093-36801310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 186
               

               Conread position:
               30-237
               

               Cow position:
               chr25:23420435-23420644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 180
               

               Conread position:
               31-318
               

               Cow position:
               chr25:33299204-33299497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 178
               
Show alignments to all cow chromosomes.