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Cow genome map

           
Conread name:
           
rche14_m4.y1
        

               
Conread position:
               
1-171
               

               
Cow position:
               
chr11:8525124-8524947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr11:2907534-2907359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr11:17083321-17083136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:11533939-11533756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:39620050-39619871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr11:42160065-42159883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr11:29960287-29960475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr11:30493985-30494171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr11:83032669-83032860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr11:15382514-15382311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr11:21885822-21886014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 163
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr11:67615257-67615068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr11:49057392-49057568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
135, 34
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:897662-897851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:30867172-30867364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr11:34646578-34646783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr11:33409273-33409073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr11:62812961-62812758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr11:63478366-63478554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr11:22582963-22583146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr11:30964334-30964537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr11:80556211-80556413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:20205863-20205663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr11:30986630-30986831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr11:71021989-71022197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr11:44032000-44032204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr11:55911645-55911447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr11:62663243-62663048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr11:48296022-48296224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 124
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr11:48315408-48315199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr11:55052860-55053064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:2917597-2917392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:33824899-33824713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:42183033-42183240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr11:80923332-80923124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 161
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr11:18447503-18447298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:4225086-4225289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr11:27405081-27404868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr11:30830625-30830417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr11:72884605-72884382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr11:46978394-46978204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr11:37425158-37424948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr11:62620366-62620584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr11:26274966-26274791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr11:58927574-58927748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr11:2925305-2925112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
33, 106
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr11:41134075-41133883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr11:71390570-71390351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr11:49872893-49872699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr11:20761839-20762040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr11:28078497-28078685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chr11:65939858-65939673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
8-184
               

               
Cow position:
               
chr11:17309405-17309586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
8-207
               

               
Cow position:
               
chr11:70821050-70821252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr11:18484178-18484014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
12-198
               

               
Cow position:
               
chr11:53888638-53888452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
13-183
               

               
Cow position:
               
chr11:51683225-51683399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
14-198
               

               
Cow position:
               
chr11:12528263-12528084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
16-170
               

               
Cow position:
               
chr11:33289451-33289299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
16-195
               

               
Cow position:
               
chr11:21590400-21590583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
17-187
               

               
Cow position:
               
chr11:17889713-17889540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
20-184
               

               
Cow position:
               
chr11:24551409-24551575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
22-192
               

               
Cow position:
               
chr11:34279765-34279928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr11:64781110-64781295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr11:2937639-2937440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
118, 9
               

               
Conread position:
               
27-187
               

               
Cow position:
               
chr11:7928699-7928864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr11:18119531-18119702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
30-177
               

               
Cow position:
               
chr11:85986021-85985872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
32-200
               

               
Cow position:
               
chr11:49192427-49192254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
33-175
               

               
Cow position:
               
chr11:36209155-36209016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
34-134
               

               
Cow position:
               
chr11:53606376-53606274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
34-169
               

               
Cow position:
               
chr11:34144892-34144750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
34-171
               

               
Cow position:
               
chr11:2835891-2836031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr11:40459140-40459284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr11:48544470-48544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr11:62889861-62889713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr11:38223755-38223610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr11:38334556-38334704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr11:48247029-48246895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
34-185
               

               
Cow position:
               
chr11:27248523-27248674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
34-185
               

               
Cow position:
               
chr11:27688358-27688216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:2484763-2484609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:35669919-35669779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:47724930-47725077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:52380839-52380685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:66685872-66685723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:79466244-79466409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr11:80296820-80296672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
34-188
               

               
Cow position:
               
chr11:49149082-49149234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
103, 64
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr11:9691037-9691201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr11:70206353-70206507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr11:57170566-57170413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr11:63165614-63165456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr11:81175629-81175794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr11:74316742-74316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr11:84385606-84385443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr11:25119899-25119737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr11:64105030-64105193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 66
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr11:17369563-17369725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr11:8422085-8421926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr11:23220395-23220561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
145, 70
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr11:36104345-36104506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr11:47899301-47899450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr11:75285727-75285558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
34-202
               

               
Cow position:
               
chr11:26442472-26442301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr11:35924093-35924269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr11:53651673-53651848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
34-210
               

               
Cow position:
               
chr11:53778649-53778829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
35-118
               

               
Cow position:
               
chr11:69075944-69076027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-151
               

               
Cow position:
               
chr11:68206808-68206695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
35-153
               

               
Cow position:
               
chr11:11469614-11469500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
35-153
               

               
Cow position:
               
chr11:68312965-68313080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
35-159
               

               
Cow position:
               
chr11:62081934-62081813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-160
               

               
Cow position:
               
chr11:39499390-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
35-167
               

               
Cow position:
               
chr11:78672704-78672838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
35-169
               

               
Cow position:
               
chr11:39854984-39854853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
35-169
               

               
Cow position:
               
chr11:63435554-63435691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr11:34467600-34467733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr11:42296586-42296456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr11:77319448-77319583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr11:60720422-60720282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-173
               

               
Cow position:
               
chr11:49207743-49207884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr11:13043112-13042973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr11:22884446-22884581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr11:14470399-14470538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr11:17036494-17036355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr11:18910849-18910706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr11:29786465-29786316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr11:4411835-4411695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr11:40608561-40608415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr11:21844103-21843960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr11:33369184-33369331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr11:51729320-51729453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr11:63484971-63485111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr11:78820184-78820328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:6233846-6233695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:6245348-6245504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:13940219-13940370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:17676339-17676192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:27746957-27747101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:30172338-30172482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:30842985-30842842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:35153790-35153637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:35352007-35351850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:35580294-35580444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:36092882-36092736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:36300548-36300401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:41986012-41985865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:49152982-49153123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:58185916-58186055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:63499096-63498948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:67614888-67614742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:70600795-70600644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr11:86895410-86895555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 74
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:5201618-5201462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:23407498-23407644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:30857071-30857219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:41215766-41215917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:43965844-43965706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr11:80639513-80639368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:12768432-12768581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:40538586-40538735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr11:62789164-62789312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
64, 70
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:6006345-6006495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:46784507-46784650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:49396492-49396340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:63695812-63695652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:65431552-65431703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:66188283-66188135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:74152721-74152563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr11:80586308-80586451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:4653221-4653073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:18508997-18508841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:18574822-18574665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:30192212-30192365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:30708540-30708692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 17
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:40818593-40818446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:43360750-43360600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:44176629-44176780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:47784808-47784968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:58102727-58102570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 7
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:62811331-62811485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:68570347-68570194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:69421679-69421518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:73637888-73638041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:74839644-74839790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:75388341-75388190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:77241738-77241890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr11:85186494-85186341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 127
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr11:30638916-30638764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr11:70978700-70978547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr11:80412980-80412821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr11:4637138-4636984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
35-191
               

               
Cow position:
               
chr11:18924779-18924938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr11:69417435-69417597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr11:71192004-71192164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr11:8670045-8670213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr11:18777566-18777399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr11:26535820-26535978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr11:50152780-50152620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr11:54872726-54872567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr11:30322459-30322300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr11:43914325-43914489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr11:62606450-62606613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr11:63201287-63201451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr11:78381031-78380874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:6320099-6319938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:17721768-17721605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:34778410-34778247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 142
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:37042005-37042168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:63407727-63407890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr11:63483976-63484136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:7617172-7617007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:20238710-20238873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:35347719-35347554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:42206455-42206613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:65826717-65826557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 117
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:79666228-79666067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr11:80399882-80400043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:5559315-5559479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
78, 149
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:10956839-10956676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:11483345-11483520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:15591441-15591282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:15772680-15772514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:25783746-25783908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:32260567-32260727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:35733050-35732883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:37100139-37099975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:42236248-42236082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:46884407-46884579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:64096632-64096468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:66041312-66041473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:67312814-67312983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr11:69978004-69978163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 82
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr11:13500049-13500211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr11:25791661-25791493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr11:41278219-41278382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr11:63035139-63034969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr11:71814740-71814900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:2084177-2084348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:8437660-8437488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:15369421-15369586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:21830176-21830012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:32800659-32800829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:40395473-40395637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:45350478-45350306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:46746667-46746836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:52690487-52690322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:55744501-55744671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr11:80370147-80370314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:17553047-17552878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:19578982-19578819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:33348153-33347998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:63475639-63475471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 148
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:63999058-63998889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:80008034-80007862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr11:81066016-81065849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
35-202
               

               
Cow position:
               
chr11:41576838-41576671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
35-202
               

               
Cow position:
               
chr11:69676317-69676154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr11:15366939-15366772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:5219127-5218961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:29659593-29659765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:29782199-29782359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:37564907-37565072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:62102414-62102240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:62742612-62742447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:66939559-66939388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr11:83028027-83028193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr11:3714854-3715028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 159
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr11:7874172-7874345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr11:15999691-15999853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
152, 101
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr11:26057617-26057440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr11:42016606-42016434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
35-206
               

               
Cow position:
               
chr11:62239778-62239949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 83
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr11:19591961-19591790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 44
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr11:42066898-42067072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr11:75915027-75915193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr11:30894970-30894792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr11:45435114-45435288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr11:57767223-57767404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr11:76896341-76896159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr11:19247166-19246990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 73
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr11:36847201-36847382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr11:13592769-13592949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 155
               

               
Conread position:
               
35-215
               

               
Cow position:
               
chr11:43641420-43641606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-217
               

               
Cow position:
               
chr11:32254183-32253998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
35-244
               

               
Cow position:
               
chr11:36266233-36266036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
36-167
               

               
Cow position:
               
chr11:83066522-83066659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
36-174
               

               
Cow position:
               
chr11:15278978-15278844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
36-178
               

               
Cow position:
               
chr11:53487119-53486982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
36-178
               

               
Cow position:
               
chr11:80564328-80564475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr11:1980233-1980082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr11:35849103-35848959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr11:65157373-65157222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr11:83249437-83249579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr11:71455855-71456016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr11:79548903-79548747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr11:60296764-60296925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr11:64334871-64335017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr11:65495305-65495157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr11:83043328-83043180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
36-189
               

               
Cow position:
               
chr11:375493-375648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
36-195
               

               
Cow position:
               
chr11:17227610-17227458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr11:47110283-47110452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr11:63849917-63849752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr11:36361608-36361448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr11:44016278-44016443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr11:70756512-70756672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
36-199
               

               
Cow position:
               
chr11:19148102-19147945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr11:12555271-12555103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr11:32817782-32817618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr11:33271465-33271625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr11:52297186-52297026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr11:63491052-63491220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
36-201
               

               
Cow position:
               
chr11:44222920-44223082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
36-201
               

               
Cow position:
               
chr11:81340506-81340343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
36-203
               

               
Cow position:
               
chr11:30476033-30476199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 81
               

               
Conread position:
               
36-206
               

               
Cow position:
               
chr11:66099828-66099650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
37-113
               

               
Cow position:
               
chr11:22747295-22747219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
77
               

               
Alignm identity:
               
71
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr11:4199306-4199453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr11:1841999-1842140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr11:46427372-46427224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
37-184
               

               
Cow position:
               
chr11:6423363-6423214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:15017092-15017245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:25620355-25620202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:31227998-31228140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:35213132-35212983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 81
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:46922850-46922700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 82
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:71492826-71492676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 123
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr11:74427713-74427866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr11:66572462-66572304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr11:82733114-82732962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
37-189
               

               
Cow position:
               
chr11:67600820-67600968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
37-196
               

               
Cow position:
               
chr11:81135132-81134972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr11:1265508-1265344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr11:46314046-46314210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 148
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr11:48085956-48086115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr11:49210786-49210622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
37-199
               

               
Cow position:
               
chr11:23271968-23271807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr11:3175709-3175870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr11:36182730-36182891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr11:25721961-25721802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr11:39060566-39060405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr11:42084640-42084475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr11:4621395-4621234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
38-152
               

               
Cow position:
               
chr11:31410841-31410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr11:259135-258987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr11:15339100-15339244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr11:41213086-41213241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
38-194
               

               
Cow position:
               
chr11:30485688-30485852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
38-194
               

               
Cow position:
               
chr11:32108652-32108494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr11:68913177-68913341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr11:23278928-23278764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:39462660-39462819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:50472353-50472515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:53773718-53773882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:63866623-63866460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:65436257-65436423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr11:65762554-65762384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 141
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr11:21124574-21124406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 146
               

               
Conread position:
               
39-183
               

               
Cow position:
               
chr11:2830694-2830839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
39-185
               

               
Cow position:
               
chr11:70250956-70251099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
39-197
               

               
Cow position:
               
chr11:3896663-3896502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 154
               

               
Conread position:
               
39-198
               

               
Cow position:
               
chr11:16314910-16315074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
39-199
               

               
Cow position:
               
chr11:83397943-83398106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
40-186
               

               
Cow position:
               
chr11:1625185-1625036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
40-192
               

               
Cow position:
               
chr11:81928469-81928320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
40-199
               

               
Cow position:
               
chr11:38657145-38656988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 137
               

               
Conread position:
               
41-195
               

               
Cow position:
               
chr11:19890879-19891028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
41-197
               

               
Cow position:
               
chr11:56114980-56115133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr11:4602192-4602348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
95, 76
               

               
Conread position:
               
44-183
               

               
Cow position:
               
chr11:6784251-6784388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
44-183
               

               
Cow position:
               
chr11:36520922-36521063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
44-187
               

               
Cow position:
               
chr11:6638955-6638816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
44-197
               

               
Cow position:
               
chr11:25968812-25968654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
44-198
               

               
Cow position:
               
chr11:18698922-18699067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
44-217
               

               
Cow position:
               
chr11:23279115-23278936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
45-179
               

               
Cow position:
               
chr11:66104348-66104214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
45-183
               

               
Cow position:
               
chr11:69035202-69035343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
45-187
               

               
Cow position:
               
chr11:63977101-63977242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
45-198
               

               
Cow position:
               
chr11:44615120-44614968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
46-187
               

               
Cow position:
               
chr11:41224-41357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
46-187
               

               
Cow position:
               
chr11:18154508-18154370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
46-189
               

               
Cow position:
               
chr11:32587079-32586937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
46-199
               

               
Cow position:
               
chr11:62655738-62655889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
90, 71
               

               
Conread position:
               
47-178
               

               
Cow position:
               
chr11:6255962-6255831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
47-195
               

               
Cow position:
               
chr11:34233492-34233639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
47-196
               

               
Cow position:
               
chr11:53460742-53460894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
47-197
               

               
Cow position:
               
chr11:63546865-63547016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
48-192
               

               
Cow position:
               
chr11:49568185-49568045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
48-200
               

               
Cow position:
               
chr11:38739060-38738910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
50-199
               

               
Cow position:
               
chr11:31525602-31525456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
51-183
               

               
Cow position:
               
chr11:1932440-1932305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
51-186
               

               
Cow position:
               
chr11:83323628-83323762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
52-175
               

               
Cow position:
               
chr11:77705801-77705925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
52-196
               

               
Cow position:
               
chr11:64029216-64029073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
55-183
               

               
Cow position:
               
chr11:68592071-68592202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr11:60488333-60488465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-185
               

               
Cow position:
               
chr11:57873863-57873993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
57-179
               

               
Cow position:
               
chr11:43594373-43594249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
58-193
               

               
Cow position:
               
chr11:6154627-6154763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
59-183
               

               
Cow position:
               
chr11:10620230-10620109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
60-198
               

               
Cow position:
               
chr11:43737049-43736910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
61-187
               

               
Cow position:
               
chr11:20093713-20093833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
61-187
               

               
Cow position:
               
chr11:73076355-73076235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
61-200
               

               
Cow position:
               
chr11:11647145-11647297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
67-184
               

               
Cow position:
               
chr11:80823975-80824087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
68-187
               

               
Cow position:
               
chr11:46592730-46592849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 43
               

               
Conread position:
               
68-202
               

               
Cow position:
               
chr11:70273527-70273660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
68-222
               

               
Cow position:
               
chr11:22102693-22102535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 145
               

               
Conread position:
               
70-200
               

               
Cow position:
               
chr11:71146402-71146526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
70-202
               

               
Cow position:
               
chr11:17617610-17617475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
75-200
               

               
Cow position:
               
chr11:47733122-47733248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
83-198
               

               
Cow position:
               
chr11:55830147-55830029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               
Show alignments to all cow chromosomes.