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Cow genome map

           
Conread name:
           
rche14_m4.y1
        

               
Conread position:
               
1-113
               

               
Cow position:
               
chr18:45637439-45637320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr18:2765225-2765350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr18:49324460-49324337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr18:14830871-14830701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr18:49015102-49015277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr18:15613887-15613702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr18:48633759-48633939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr18:12242250-12242442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 190
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr18:35786029-35786219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 130
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:9974355-9974160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:11790898-11791088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:34444760-34444567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:38937794-38937990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 126
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:43796982-43796788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:45903921-45903726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:49603070-49602872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:51383424-51383228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr18:52413939-52414137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr18:55505380-55505573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr18:6310057-6310252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:31082375-31082169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr18:47824796-47824599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr18:1954616-1954400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr18:49841255-49841462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr18:52649374-52649160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 199
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr18:50095425-50095227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr18:23630631-23630433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr18:41257929-41257733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr18:44262604-44262806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr18:10954441-10954649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:20462722-20462519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:2773419-2773195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:2776922-2776698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr18:49038435-49038670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr18:34834469-34834640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr18:14225368-14225554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr18:6470069-6470259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr18:15809826-15809644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr18:28930661-28930474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr18:30673452-30673272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr18:28657936-28657750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr18:43056874-43057063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr18:48407714-48407907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr18:42967095-42967285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr18:728010-728203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr18:17391018-17390808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr18:38211136-38211346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 199
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr18:4485583-4485763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr18:50004726-50004536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr18:22790112-22789909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
6-175
               

               
Cow position:
               
chr18:43014882-43014712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
13-205
               

               
Cow position:
               
chr18:10517101-10517293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
18-197
               

               
Cow position:
               
chr18:10214188-10214011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr18:18815935-18816108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
28-197
               

               
Cow position:
               
chr18:53053224-53053050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 158
               

               
Conread position:
               
30-116
               

               
Cow position:
               
chr18:8390203-8390289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
87
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
30-192
               

               
Cow position:
               
chr18:1399342-1399177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
30-204
               

               
Cow position:
               
chr18:42432076-42431901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
31-194
               

               
Cow position:
               
chr18:7487247-7487414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
34-165
               

               
Cow position:
               
chr18:31727627-31727497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
34-166
               

               
Cow position:
               
chr18:24759639-24759510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
34-173
               

               
Cow position:
               
chr18:19143955-19143814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
34-177
               

               
Cow position:
               
chr18:42747605-42747759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
34-178
               

               
Cow position:
               
chr18:15517154-15517013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
34-182
               

               
Cow position:
               
chr18:5647830-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
34-182
               

               
Cow position:
               
chr18:18664356-18664200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
34-182
               

               
Cow position:
               
chr18:47547969-47547817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr18:24719330-24719475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr18:33364229-33364376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr18:45573397-45573547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr18:55722518-55722666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
34-184
               

               
Cow position:
               
chr18:31159256-31159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
34-186
               

               
Cow position:
               
chr18:38601867-38601713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:3417175-3417336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:4884501-4884348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 27
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:9010725-9010875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:12059014-12059164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:21195318-21195177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr18:45897748-45897897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr18:40028232-40028399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr18:10051764-10051922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr18:21751395-21751557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr18:27637509-27637677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
34-201
               

               
Cow position:
               
chr18:12023620-12023455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
34-205
               

               
Cow position:
               
chr18:9089716-9089877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
35-153
               

               
Cow position:
               
chr18:4804249-4804131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
35-168
               

               
Cow position:
               
chr18:43125104-43125228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
35-169
               

               
Cow position:
               
chr18:11183958-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
35-170
               

               
Cow position:
               
chr18:306701-306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr18:12273676-12273809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-176
               

               
Cow position:
               
chr18:29065365-29065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr18:3085498-3085347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr18:50276225-50276082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr18:35367178-35367044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr18:35535128-35534989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:10758037-10757895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:17195327-17195184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:19809664-19809521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:21143945-21143806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:25598214-25598071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:33158960-33159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:35857906-35857762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:37002650-37002799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:51757112-51757256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:55499090-55499232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr18:56183488-56183338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr18:48000808-48000663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:2144589-2144736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:4907165-4907310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:7956166-7956315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:9596201-9596343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:16137263-16137112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:19193347-19193206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:29648802-29648946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
102, 40
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:39623818-39623970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:50959506-50959655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr18:52387202-52387052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:3709248-3709398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:5632286-5632432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:8949777-8949632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:18592491-18592631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:27078882-27079034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:29091756-29091895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:44206066-44205927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:47096447-47096589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr18:51643347-51643202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 42
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr18:4556151-4555996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr18:40047480-40047336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr18:247677-247528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr18:8171067-8170922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr18:10904868-10905016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr18:46048770-46048923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:8208407-8208252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:10977193-10977045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:11233432-11233591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:11434771-11434921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:11779671-11779820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:22055856-22055691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 160
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:24508213-24508063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:29264337-29264195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:31557142-31556987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:33896400-33896243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:36501060-36500911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:44909071-44909224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:45185890-45186041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:45558166-45558314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:47868623-47868767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:48713569-48713712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:50263905-50263760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:50283800-50283654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:51413609-51413751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr18:52251839-52251682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr18:9066720-9066871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 56
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr18:32243713-32243568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr18:3158577-3158408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr18:30360131-30359967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr18:39662797-39662957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 32
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr18:49440859-49441018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr18:12584821-12584665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 88
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr18:30341166-30341006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr18:1144166-1144014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr18:4489890-4489723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr18:34490299-34490461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr18:10117758-10117915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr18:12143932-12143775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr18:42427638-42427793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr18:55119893-55120044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:21782705-21782864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:32189489-32189339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:35715593-35715426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:43283738-43283575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:46452860-46452704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr18:47419817-47419971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:1931440-1931281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:11832369-11832537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:12270519-12270693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:15351712-15351549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:16659414-16659248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 150
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:23648940-23649109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:25601306-25601145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:29371885-29372052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:33757035-33757195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:35171366-35171530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:37799995-37800157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:42479568-42479401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:43950844-43951011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:47175363-47175196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:50359350-50359502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr18:51405888-51405736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr18:12113347-12113188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr18:24266389-24266217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr18:44917775-44917936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr18:49017513-49017664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr18:3180429-3180590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr18:23810102-23809938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 111
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr18:43400697-43400544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr18:44514104-44514271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 149
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr18:49970635-49970468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr18:4530577-4530737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr18:23380149-23380310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr18:37690168-37690335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr18:18844034-18844197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr18:30676641-30676466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 31
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr18:2793953-2793790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr18:16545447-16545277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr18:41724800-41724628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr18:49161285-49161112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr18:21051065-21050901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 67
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr18:21528665-21528838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr18:23162904-23163082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-206
               

               
Cow position:
               
chr18:4851465-4851295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr18:238098-237924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr18:21187324-21187489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr18:1549531-1549347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr18:35795204-35795024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr18:34389365-34389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
35-279
               

               
Cow position:
               
chr18:50632424-50632186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
36-171
               

               
Cow position:
               
chr18:50018713-50018588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
36-176
               

               
Cow position:
               
chr18:47680533-47680669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
36-176
               

               
Cow position:
               
chr18:47865090-47865226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
36-177
               

               
Cow position:
               
chr18:3098013-3097865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
36-178
               

               
Cow position:
               
chr18:39972550-39972687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr18:3211897-3212042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
36-180
               

               
Cow position:
               
chr18:48112948-48112803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr18:4626771-4626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr18:18918940-18918797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 14
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr18:47802072-47801929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr18:4152535-4152382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr18:10891533-10891681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr18:17974649-17974794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr18:19962125-19961966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr18:52406083-52406231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
36-188
               

               
Cow position:
               
chr18:11691390-11691235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr18:25757297-25757129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr18:41553352-41553181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
36-202
               

               
Cow position:
               
chr18:20641477-20641315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
36-203
               

               
Cow position:
               
chr18:37189275-37189104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
36-204
               

               
Cow position:
               
chr18:55692835-55693007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
37-172
               

               
Cow position:
               
chr18:44548726-44548591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 81
               

               
Conread position:
               
37-178
               

               
Cow position:
               
chr18:23821812-23821668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr18:9365941-9366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 82
               

               
Conread position:
               
37-184
               

               
Cow position:
               
chr18:28322677-28322819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr18:19831602-19831746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
37-192
               

               
Cow position:
               
chr18:38985719-38985866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
37-197
               

               
Cow position:
               
chr18:41702854-41703013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 76
               

               
Conread position:
               
37-199
               

               
Cow position:
               
chr18:22569046-22568886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr18:5189673-5189509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr18:1571217-1571054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr18:2108267-2108435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
37-232
               

               
Cow position:
               
chr18:56176946-56177127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
37-236
               

               
Cow position:
               
chr18:37187977-37187776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 147
               

               
Conread position:
               
38-169
               

               
Cow position:
               
chr18:35874099-35874230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
38-172
               

               
Cow position:
               
chr18:24022639-24022770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr18:104070-104218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr18:16417474-16417335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr18:3132749-3132607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr18:11856922-11857062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr18:32290733-32290868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
38-184
               

               
Cow position:
               
chr18:22045393-22045244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
38-190
               

               
Cow position:
               
chr18:6881335-6881186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
38-196
               

               
Cow position:
               
chr18:17007459-17007307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
38-200
               

               
Cow position:
               
chr18:49100347-49100202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
38-279
               

               
Cow position:
               
chr18:10576132-10576357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
39-187
               

               
Cow position:
               
chr18:12117828-12117683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
40-179
               

               
Cow position:
               
chr18:7945221-7945359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
40-179
               

               
Cow position:
               
chr18:7952226-7952372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
40-198
               

               
Cow position:
               
chr18:31672490-31672338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
41-177
               

               
Cow position:
               
chr18:41025105-41024958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
41-183
               

               
Cow position:
               
chr18:6829098-6828955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr18:2553893-2553736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
43-174
               

               
Cow position:
               
chr18:6102937-6102807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
44-198
               

               
Cow position:
               
chr18:37804666-37804811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr18:50786936-50786781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
44-208
               

               
Cow position:
               
chr18:34219888-34219718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 145
               

               
Conread position:
               
45-196
               

               
Cow position:
               
chr18:11867368-11867517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
46-179
               

               
Cow position:
               
chr18:25139589-25139723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
47-197
               

               
Cow position:
               
chr18:11814334-11814479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
47-198
               

               
Cow position:
               
chr18:17756915-17756760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
48-183
               

               
Cow position:
               
chr18:30247973-30247839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
48-199
               

               
Cow position:
               
chr18:1735568-1735415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
48-217
               

               
Cow position:
               
chr18:18520770-18520600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
49-183
               

               
Cow position:
               
chr18:5072378-5072251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
50-185
               

               
Cow position:
               
chr18:22180744-22180613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
51-187
               

               
Cow position:
               
chr18:26647593-26647731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
51-200
               

               
Cow position:
               
chr18:4485445-4485588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
53-187
               

               
Cow position:
               
chr18:641277-641145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
55-200
               

               
Cow position:
               
chr18:47417035-47417187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
55-205
               

               
Cow position:
               
chr18:51398295-51398145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
58-179
               

               
Cow position:
               
chr18:11618722-11618836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
60-187
               

               
Cow position:
               
chr18:12026558-12026684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
62-187
               

               
Cow position:
               
chr18:35112260-35112137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
67-177
               

               
Cow position:
               
chr18:18496609-18496721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
68-195
               

               
Cow position:
               
chr18:1151895-1151769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
68-198
               

               
Cow position:
               
chr18:52626221-52626349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
70-187
               

               
Cow position:
               
chr18:21410738-21410857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
72-199
               

               
Cow position:
               
chr18:37031883-37032012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
75-199
               

               
Cow position:
               
chr18:18956823-18956700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
76-197
               

               
Cow position:
               
chr18:24834914-24835029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
77-200
               

               
Cow position:
               
chr18:32960136-32960264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
84-210
               

               
Cow position:
               
chr18:37160534-37160401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
109-210
               

               
Cow position:
               
chr18:17660250-17660148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               
Show alignments to all cow chromosomes.