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Cow genome map

           
Conread name:
           
rche14_m4.y1
        

               
Conread position:
               
1-169
               

               
Cow position:
               
chr25:36872362-36872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr25:36873329-36873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr25:6683058-6682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr25:11760446-11760267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr25:9574126-9573938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr25:26701034-26701217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr25:8120787-8120979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:2361841-2362026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:20202917-20203109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr25:30852771-30852966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr25:13826439-13826634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:4245681-4245871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:9990106-9989896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:12195222-12195015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr25:21192926-21192735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr25:36073992-36073795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 164
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr25:37332032-37331838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr25:19584368-19584576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 202
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr25:2414819-2415007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr25:4521833-4521633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr25:9843180-9843393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 172
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:15273677-15273877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:33457736-33457940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr25:7441033-7441229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
135, 26
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr25:13621352-13621073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr25:19364054-19363869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr25:24669439-24669252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr25:1840329-1840523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr25:23473445-23473647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr25:22178922-22179130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr25:12319338-12319070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr25:2624802-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 124
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr25:17190737-17190573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr25:21547174-21547364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
134, 96
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr25:22348457-22348246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr25:33557282-33557467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr25:3992793-3993011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr25:15349897-15349709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr25:3346186-3345989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
6-161
               

               
Cow position:
               
chr25:22203679-22203522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr25:28986876-28987074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr25:38957967-38958177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 114
               

               
Conread position:
               
7-196
               

               
Cow position:
               
chr25:12609353-12609553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr25:7551349-7551139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
9-196
               

               
Cow position:
               
chr25:7185255-7185064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
6, 185
               

               
Conread position:
               
12-190
               

               
Cow position:
               
chr25:26056710-26056542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
13-171
               

               
Cow position:
               
chr25:36535393-36535233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 138
               

               
Conread position:
               
24-179
               

               
Cow position:
               
chr25:17658648-17658805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr25:22119616-22119434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
28-179
               

               
Cow position:
               
chr25:29903678-29903826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
30-179
               

               
Cow position:
               
chr25:4504730-4504587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 73
               

               
Conread position:
               
34-134
               

               
Cow position:
               
chr25:32277559-32277467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
34-184
               

               
Cow position:
               
chr25:33100623-33100770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr25:1802659-1802813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr25:11060180-11060336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr25:33550559-33550712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr25:33311278-33311115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr25:36369867-36370031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr25:36375558-36375722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr25:7641401-7641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr25:12509963-12509811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr25:20085625-20085790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr25:2111092-2111250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr25:26989245-26989416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-201
               

               
Cow position:
               
chr25:11585566-11585744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr25:7311348-7311170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
34-209
               

               
Cow position:
               
chr25:35802615-35802436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr25:14419752-14419925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
35-153
               

               
Cow position:
               
chr25:15714922-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
35-162
               

               
Cow position:
               
chr25:6781911-6782036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-167
               

               
Cow position:
               
chr25:11855501-11855366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-169
               

               
Cow position:
               
chr25:22571007-22571142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-169
               

               
Cow position:
               
chr25:23244953-23244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr25:13443361-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr25:20244210-20244064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr25:23829080-23828941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
35-176
               

               
Cow position:
               
chr25:10504292-10504145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr25:26072512-26072372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr25:26306155-26306012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr25:20008182-20008326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:4157197-4157054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
100, 82
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:9615886-9616031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 86
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:11543543-11543408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:11857938-11857793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:18288720-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:23769838-23769704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:31514230-31514377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:33776104-33776253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr25:36081924-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr25:9640988-9640840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
35-180
               

               
Cow position:
               
chr25:37965306-37965457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr25:31657228-31657084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:2662444-2662591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:7306341-7306487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:14164244-14164395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:23519983-23519840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:35109220-35109081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:36746399-36746250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr25:36873007-36872858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr25:432999-432850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 120
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr25:19129904-19130053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 33
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:11956853-11957004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:13565274-13565134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:17919023-17919178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:22298686-22298832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 26
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:22315254-22315404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr25:24202963-24202809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:3744696-3744533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:5637336-5637186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 83
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:5807994-5808150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:5922658-5922513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:11315951-11316103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:12223620-12223765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:15305727-15305881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 38
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:18551285-18551132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:18721071-18720927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:21893387-21893535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:24573114-24573259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:31926328-31926183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:36070700-36070848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:40682786-40682938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr25:41150917-41150763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr25:7216873-7217020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr25:22734057-22734209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr25:35902796-35902947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
35-190
               

               
Cow position:
               
chr25:36555640-36555495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr25:35052573-35052409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr25:15447545-15447700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr25:16921748-16921583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr25:18934586-18934428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr25:22565909-22565757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr25:30619112-30619277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr25:18865869-18866019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr25:30279159-30278986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:7380790-7380625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:7684849-7684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:8347701-8347870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:17119791-17119956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:22730879-22731038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:27595613-27595772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr25:30709299-30709134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr25:1763136-1763295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr25:1824048-1823882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr25:7673350-7673514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr25:14210032-14210188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr25:40904781-40904617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr25:9023800-9023956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr25:15573437-15573591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr25:17141151-17141317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr25:20162441-20162271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr25:26269668-26269502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 154
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr25:1838290-1838461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr25:8410985-8410819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr25:22154073-22154242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 153
               

               
Conread position:
               
35-202
               

               
Cow position:
               
chr25:13222949-13223113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr25:18491087-18491258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr25:26679275-26679444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr25:36716965-36717129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr25:22373441-22373269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr25:24115267-24115096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr25:34990222-34990058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr25:26087568-26087741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
35-209
               

               
Cow position:
               
chr25:11373851-11373683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
160, 101
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr25:14791803-14791976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
35-214
               

               
Cow position:
               
chr25:18760659-18760481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
35-222
               

               
Cow position:
               
chr25:13823670-13823478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr25:24167647-24167396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
35-279
               

               
Cow position:
               
chr25:19679404-19679641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
36-167
               

               
Cow position:
               
chr25:14949760-14949630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
36-176
               

               
Cow position:
               
chr25:16372603-16372743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr25:17403529-17403669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr25:17724173-17724014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr25:5846759-5846594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr25:15999502-15999340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr25:20785536-20785374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
82, 18
               

               
Conread position:
               
36-199
               

               
Cow position:
               
chr25:18131328-18131158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
36-207
               

               
Cow position:
               
chr25:14833611-14833449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
36-208
               

               
Cow position:
               
chr25:33686635-33686462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 141
               

               
Conread position:
               
36-233
               

               
Cow position:
               
chr25:35339139-35338943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr25:9269394-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr25:13272620-13272770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr25:26642858-26643013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr25:28667995-28667842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
37-196
               

               
Cow position:
               
chr25:28940090-28939933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 145
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr25:7750503-7750661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr25:17704795-17704948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr25:33555656-33555827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
37-235
               

               
Cow position:
               
chr25:28597559-28597356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
97, 187
               

               
Conread position:
               
38-168
               

               
Cow position:
               
chr25:23779278-23779151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
38-178
               

               
Cow position:
               
chr25:10856662-10856524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
38-186
               

               
Cow position:
               
chr25:1509914-1509763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr25:7007964-7008121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr25:26524008-26524163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
38-188
               

               
Cow position:
               
chr25:21668301-21668450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
38-199
               

               
Cow position:
               
chr25:11432893-11432735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 80
               

               
Conread position:
               
38-205
               

               
Cow position:
               
chr25:21082355-21082185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
98, 166
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr25:14241301-14241135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
61, 149
               

               
Conread position:
               
40-179
               

               
Cow position:
               
chr25:18812741-18812607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
41-197
               

               
Cow position:
               
chr25:20523179-20523027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
41-198
               

               
Cow position:
               
chr25:9025177-9025334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
44-194
               

               
Cow position:
               
chr25:33272691-33272844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 142
               

               
Conread position:
               
44-198
               

               
Cow position:
               
chr25:22642322-22642487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr25:25097918-25098075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
45-187
               

               
Cow position:
               
chr25:4488970-4489104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
46-182
               

               
Cow position:
               
chr25:13470654-13470515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
46-197
               

               
Cow position:
               
chr25:35762647-35762800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
46-197
               

               
Cow position:
               
chr25:37648842-37648995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
46-205
               

               
Cow position:
               
chr25:7864393-7864550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
91, 40
               

               
Conread position:
               
51-187
               

               
Cow position:
               
chr25:2195317-2195189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
55-199
               

               
Cow position:
               
chr25:22752963-22753108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
56-200
               

               
Cow position:
               
chr25:14659050-14658914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
57-187
               

               
Cow position:
               
chr25:37022417-37022291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
57-188
               

               
Cow position:
               
chr25:32587173-32587049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
57-200
               

               
Cow position:
               
chr25:6940418-6940275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
58-187
               

               
Cow position:
               
chr25:22439430-22439302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
69-187
               

               
Cow position:
               
chr25:16491181-16491298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
75-217
               

               
Cow position:
               
chr25:3972558-3972695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
79-184
               

               
Cow position:
               
chr25:19301495-19301599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
80-196
               

               
Cow position:
               
chr25:11096144-11096027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
80-199
               

               
Cow position:
               
chr25:30462229-30462108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
81-196
               

               
Cow position:
               
chr25:17707905-17708015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
100-189
               

               
Cow position:
               
chr25:12899879-12899969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               
Show alignments to all cow chromosomes.