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Cow genome map

           
Conread name:
           
rche14_m4.y1
        

               
Conread position:
               
1-132
               

               
Cow position:
               
chr28:25596642-25596775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr28:16346520-16346346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr28:16879584-16879760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr28:25128898-25129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr28:11016418-11016603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr28:12430617-12430805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr28:3410976-3410785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:3023902-3023711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:5805682-5805867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:9285359-9285172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 116
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr28:11527247-11527054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr28:16919157-16918967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr28:4013095-4013291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr28:4809790-4809979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr28:3740887-3741080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr28:4364811-4364613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr28:5074496-5074305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr28:7350665-7350865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:134057-133862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr28:33884413-33884622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr28:5138980-5138779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr28:11426530-11426326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr28:29850804-29850603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr28:30902137-30902345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr28:7619139-7618857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
2-101
               

               
Cow position:
               
chr28:8348418-8348322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr28:4876455-4876643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
2-184
               

               
Cow position:
               
chr28:16204322-16204125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr28:9636445-9636241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr28:7132075-7131870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr28:4877419-4877204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr28:4938826-4938982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr28:18369994-18369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr28:23460160-23460348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr28:8396348-8396530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr28:29416703-29416512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr28:19015729-19015918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr28:5224720-5224923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 33
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr28:11828944-11828751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr28:11743800-11743620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr28:11987193-11987371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr28:12055431-12055609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
6-196
               

               
Cow position:
               
chr28:11827704-11827907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr28:10891292-10891122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
29, 106
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr28:23728275-23728092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
15-171
               

               
Cow position:
               
chr28:5711984-5711819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
25-200
               

               
Cow position:
               
chr28:22170234-22170061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
26-196
               

               
Cow position:
               
chr28:13174509-13174337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
27-183
               

               
Cow position:
               
chr28:16177303-16177454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr28:3311178-3310997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
32-172
               

               
Cow position:
               
chr28:17060119-17060254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
34-165
               

               
Cow position:
               
chr28:657420-657279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
34-169
               

               
Cow position:
               
chr28:4100704-4100574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
34-178
               

               
Cow position:
               
chr28:2821313-2821460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
34-178
               

               
Cow position:
               
chr28:22183086-22182934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr28:5673930-5674072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr28:8347786-8347938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
34-186
               

               
Cow position:
               
chr28:8681375-8681230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr28:2151385-2151232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr28:4884198-4884045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr28:19216876-19217020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr28:12951472-12951631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
34-192
               

               
Cow position:
               
chr28:13527249-13527410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr28:4163528-4163363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
34-194
               

               
Cow position:
               
chr28:5630153-5630316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr28:7808694-7808846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr28:21118732-21118898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr28:8716333-8716165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 155
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr28:10495246-10495080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr28:4937187-4937021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr28:22371611-22371457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
102, 7
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr28:34230283-34230448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr28:14657768-14657936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr28:7523361-7523196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr28:9705705-9705878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr28:24767459-24767628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
34-205
               

               
Cow position:
               
chr28:5235936-5236100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
34-278
               

               
Cow position:
               
chr28:7644797-7645033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
35-170
               

               
Cow position:
               
chr28:26743682-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr28:18608312-18608173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr28:4045900-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
35-172
               

               
Cow position:
               
chr28:9684278-9684144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr28:9069944-9070081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr28:7267890-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:10890679-10890542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:17738097-17737950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:19038963-19038818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:20968524-20968376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr28:24082326-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr28:26868095-26867951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:4588374-4588518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:5236548-5236391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:5437029-5436882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:11798723-11798572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:12991198-12991339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:18791094-18791238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:20759645-20759489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:21744771-21744916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:21845013-21845155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:24996557-24996414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 46
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr28:26820223-26820072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr28:6321873-6322024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr28:7557678-7557522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr28:5684759-5684906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:2777586-2777736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:3726153-3726001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:9740522-9740665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:11422760-11422612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:16370027-16369882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr28:17680678-17680832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:662162-662308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:2737462-2737318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:3143822-3143677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:4006840-4006989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 41
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:4071025-4071166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:4182057-4182209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:4643714-4643562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:5204251-5204393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:6301137-6301294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:8259684-8259840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:8383917-8384080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:9109272-9109418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:10958858-10959007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 35
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:11079357-11079508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:19564172-19564027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:21008610-21008463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:22813314-22813456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:25057022-25057164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:27787622-27787772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr28:28765847-28765695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr28:4101578-4101721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr28:7008922-7008772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr28:11585146-11585000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr28:28501287-28501451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr28:4834788-4834632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
35-190
               

               
Cow position:
               
chr28:13474356-13474510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
35-191
               

               
Cow position:
               
chr28:22500442-22500294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr28:8656110-8655955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr28:24238421-24238271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
35-193
               

               
Cow position:
               
chr28:5609861-5609702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
35-193
               

               
Cow position:
               
chr28:32358163-32358318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr28:2892308-2892473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr28:11346431-11346275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr28:2435976-2435825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr28:8140538-8140700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr28:15362635-15362794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr28:16857051-16856891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr28:21263213-21263369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr28:8304303-8304459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr28:8936206-8936366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 47
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:3492728-3492567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:7750960-7750802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:10863736-10863582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:12933674-12933519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:13356315-13356148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:22332584-22332747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:24646647-24646798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr28:26982682-26982520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr28:2077556-2077723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr28:4159011-4159183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr28:17949057-17948899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr28:20124841-20125000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr28:4016587-4016743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr28:18797376-18797527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr28:19394927-19395080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr28:19994894-19994727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
48, 150
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:751283-751446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:4027407-4027249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:4866517-4866357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:5205327-5205471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:9426294-9426127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:10203175-10203333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:10252861-10252695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:20173895-20174059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:22085486-22085325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr28:32014840-32015010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr28:5199880-5200051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr28:24966442-24966608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:659239-659066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:3011215-3011040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:3137599-3137780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:4307841-4307665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:5144465-5144288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:11305577-11305411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr28:21868513-21868681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
35-207
               

               
Cow position:
               
chr28:11398741-11398565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr28:5254930-5255101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-212
               

               
Cow position:
               
chr28:10606578-10606405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
35-218
               

               
Cow position:
               
chr28:29989054-29988868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
35-224
               

               
Cow position:
               
chr28:24651550-24651370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
157, 82
               

               
Conread position:
               
35-227
               

               
Cow position:
               
chr28:777731-777920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
35-240
               

               
Cow position:
               
chr28:4282435-4282233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
35-278
               

               
Cow position:
               
chr28:8827216-8827464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 220
               

               
Conread position:
               
36-177
               

               
Cow position:
               
chr28:26826276-26826420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr28:5441841-5441693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr28:13269784-13269923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr28:4077289-4077132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
36-184
               

               
Cow position:
               
chr28:19262530-19262379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr28:11866608-11866458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
100, 72
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr28:26960852-26960705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr28:30937612-30937475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
36-188
               

               
Cow position:
               
chr28:22278575-22278416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
36-194
               

               
Cow position:
               
chr28:6563840-6563677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr28:117706-117539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
36-196
               

               
Cow position:
               
chr28:12672408-12672245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 150
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr28:13245618-13245786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
36-199
               

               
Cow position:
               
chr28:118666-118837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
36-199
               

               
Cow position:
               
chr28:11411477-11411319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
36-200
               

               
Cow position:
               
chr28:17620304-17620135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 6
               

               
Conread position:
               
36-204
               

               
Cow position:
               
chr28:10140526-10140354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
36-204
               

               
Cow position:
               
chr28:18847614-18847788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
37-173
               

               
Cow position:
               
chr28:2279538-2279408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr28:6975299-6975434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 66
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr28:3759048-3759201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr28:26574468-26574604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
37-184
               

               
Cow position:
               
chr28:10615888-10615745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
37-186
               

               
Cow position:
               
chr28:10977900-10978045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr28:14998125-14998269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr28:17739880-17740033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr28:17943788-17943932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr28:28903502-28903349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
37-194
               

               
Cow position:
               
chr28:7697924-7697762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr28:10762952-10763104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
37-196
               

               
Cow position:
               
chr28:10053267-10053114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr28:3423835-3423995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr28:16200685-16200524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr28:24698748-24698912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 40
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr28:26304121-26304282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr28:3257046-3257212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr28:29500458-29500626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 159
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr28:11059558-11059716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr28:16159813-16159641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr28:30922002-30921834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
37-207
               

               
Cow position:
               
chr28:3678420-3678588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr28:3445424-3445252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
37-282
               

               
Cow position:
               
chr28:1838043-1838296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
38-182
               

               
Cow position:
               
chr28:3746261-3746400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr28:5577588-5577740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr28:5725089-5724931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr28:11562187-11562028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
39-195
               

               
Cow position:
               
chr28:4185966-4186119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
40-179
               

               
Cow position:
               
chr28:5188366-5188229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
40-183
               

               
Cow position:
               
chr28:4089997-4089857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
40-184
               

               
Cow position:
               
chr28:27218383-27218530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
40-196
               

               
Cow position:
               
chr28:11815015-11814863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
46-188
               

               
Cow position:
               
chr28:10533254-10533118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
47-187
               

               
Cow position:
               
chr28:8787607-8787747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
47-195
               

               
Cow position:
               
chr28:16964900-16964749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
47-197
               

               
Cow position:
               
chr28:8165148-8164998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
50-178
               

               
Cow position:
               
chr28:4878794-4878665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
63-184
               

               
Cow position:
               
chr28:18761926-18761803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
67-179
               

               
Cow position:
               
chr28:4375535-4375426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
67-187
               

               
Cow position:
               
chr28:1825489-1825608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
68-194
               

               
Cow position:
               
chr28:3449401-3449526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
76-198
               

               
Cow position:
               
chr28:8291516-8291633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 23
               
Show alignments to all cow chromosomes.