Non-Coding RNA Search

Cow genome map


           Conread name:
           rche14_m4.y1
        

               Conread position:
               1-121
               

               Cow position:
               chr3:20677857-20677729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1-171
               

               Cow position:
               chr3:74079654-74079475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               1-179
               

               Cow position:
               chr3:74533331-74533505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 69
               

               Conread position:
               1-183
               

               Cow position:
               chr3:44932498-44932687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 124
               

               Conread position:
               1-183
               

               Cow position:
               chr3:55189772-55189575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               1-183
               

               Cow position:
               chr3:70609614-70609800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               1-184
               

               Cow position:
               chr3:9120827-9121018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               1-184
               

               Cow position:
               chr3:32585132-32585329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1-186
               

               Cow position:
               chr3:16752276-16752076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-187
               

               Cow position:
               chr3:13353346-13353543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               1-187
               

               Cow position:
               chr3:68708026-68707843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               1-187
               

               Cow position:
               chr3:78115597-78115409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               1-194
               

               Cow position:
               chr3:23408374-23408180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               1-195
               

               Cow position:
               chr3:53790554-53790355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               1-197
               

               Cow position:
               chr3:15950931-15950731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               1-197
               

               Cow position:
               chr3:31115288-31115088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               1-197
               

               Cow position:
               chr3:49363091-49363292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               1-197
               

               Cow position:
               chr3:80072111-80072332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-198
               

               Cow position:
               chr3:59604828-59605031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 121
               

               Conread position:
               1-198
               

               Cow position:
               chr3:60264734-60264532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               1-198
               

               Cow position:
               chr3:75080745-75080942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               1-198
               

               Cow position:
               chr3:80564948-80565158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               1-199
               

               Cow position:
               chr3:26065981-26066178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               1-199
               

               Cow position:
               chr3:78092529-78092317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               1-200
               

               Cow position:
               chr3:64196808-64197019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               1-200
               

               Cow position:
               chr3:67407384-67407175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 127
               

               Conread position:
               1-203
               

               Cow position:
               chr3:19788848-19788646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 127
               

               Conread position:
               1-203
               

               Cow position:
               chr3:27274513-27274722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               1-204
               

               Cow position:
               chr3:54946113-54946317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               1-206
               

               Cow position:
               chr3:70762138-70761925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               1-209
               

               Cow position:
               chr3:9117009-9117236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               25, 219
               

               Conread position:
               1-246
               

               Cow position:
               chr3:7337800-7337550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               2-197
               

               Cow position:
               chr3:6182238-6182044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               28, 108
               

               Conread position:
               2-236
               

               Cow position:
               chr3:33002370-33002616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               36, 115
               

               Conread position:
               3-167
               

               Cow position:
               chr3:68627703-68627528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 113
               

               Conread position:
               3-178
               

               Cow position:
               chr3:10668895-10668709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               32, 119
               

               Conread position:
               3-178
               

               Cow position:
               chr3:56932441-56932624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               3-186
               

               Cow position:
               chr3:5305782-5305981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               3-196
               

               Cow position:
               chr3:82019855-82019654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 116
               

               Conread position:
               3-199
               

               Cow position:
               chr3:7331139-7330949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               3-199
               

               Cow position:
               chr3:8540507-8540689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 23
               

               Conread position:
               3-208
               

               Cow position:
               chr3:82366111-82366331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr3:75479988-75480185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 112
               

               Conread position:
               6-197
               

               Cow position:
               chr3:16107370-16107186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               8-183
               

               Cow position:
               chr3:621433-621616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               13-197
               

               Cow position:
               chr3:8523148-8522965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               23-187
               

               Cow position:
               chr3:27212335-27212497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               24-196
               

               Cow position:
               chr3:12178072-12178250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 53
               

               Conread position:
               25-187
               

               Cow position:
               chr3:79884470-79884301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               26-195
               

               Cow position:
               chr3:61211439-61211278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               26-201
               

               Cow position:
               chr3:29221936-29221764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               28-193
               

               Cow position:
               chr3:5821434-5821267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               29-198
               

               Cow position:
               chr3:71247042-71247203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               107, 37
               

               Conread position:
               31-194
               

               Cow position:
               chr3:29943880-29944043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               52, 5
               

               Conread position:
               32-202
               

               Cow position:
               chr3:17304947-17304776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 45
               

               Conread position:
               33-200
               

               Cow position:
               chr3:59828368-59828196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               34-163
               

               Cow position:
               chr3:35239039-35239166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 31
               

               Conread position:
               34-171
               

               Cow position:
               chr3:53046637-53046495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               34-177
               

               Cow position:
               chr3:75238483-75238630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               34-178
               

               Cow position:
               chr3:24922773-24922912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               103, 60
               

               Conread position:
               34-179
               

               Cow position:
               chr3:4518157-4518013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               112, 83
               

               Conread position:
               34-179
               

               Cow position:
               chr3:65237050-65237194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               34-183
               

               Cow position:
               chr3:562768-562614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               34-183
               

               Cow position:
               chr3:17936813-17936672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 53
               

               Conread position:
               34-183
               

               Cow position:
               chr3:20841847-20841704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               34-183
               

               Cow position:
               chr3:39969836-39969688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               34-184
               

               Cow position:
               chr3:59635338-59635479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 63
               

               Conread position:
               34-186
               

               Cow position:
               chr3:65969193-65969351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               67, 150
               

               Conread position:
               34-187
               

               Cow position:
               chr3:3985348-3985494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               34-187
               

               Cow position:
               chr3:8526339-8526200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               34-187
               

               Cow position:
               chr3:30940832-30940984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               68, 125
               

               Conread position:
               34-187
               

               Cow position:
               chr3:36418458-36418308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               34-187
               

               Cow position:
               chr3:40344004-40343859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               34-187
               

               Cow position:
               chr3:57274087-57274238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               34-187
               

               Cow position:
               chr3:83215288-83215448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               34-188
               

               Cow position:
               chr3:52456941-52457089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               104, 39
               

               Conread position:
               34-192
               

               Cow position:
               chr3:22868692-22868532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               34-192
               

               Cow position:
               chr3:76267949-76267790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               34-194
               

               Cow position:
               chr3:19682723-19682893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               34-195
               

               Cow position:
               chr3:210345-210511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               34-195
               

               Cow position:
               chr3:3453605-3453767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 153
               

               Conread position:
               34-195
               

               Cow position:
               chr3:33252863-33252706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 67
               

               Conread position:
               34-196
               

               Cow position:
               chr3:3316790-3316619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               34-196
               

               Cow position:
               chr3:23169040-23168880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 119
               

               Conread position:
               34-196
               

               Cow position:
               chr3:45667318-45667158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               34-197
               

               Cow position:
               chr3:2636904-2636748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               34-197
               

               Cow position:
               chr3:15160546-15160703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               34-197
               

               Cow position:
               chr3:29334388-29334222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               34-197
               

               Cow position:
               chr3:76168606-76168441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 158
               

               Conread position:
               34-197
               

               Cow position:
               chr3:79893472-79893307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               34-198
               

               Cow position:
               chr3:12637535-12637694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               34-198
               

               Cow position:
               chr3:13301824-13301657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 43
               

               Conread position:
               34-198
               

               Cow position:
               chr3:14552901-14553059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               34-198
               

               Cow position:
               chr3:32376839-32377004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               34-198
               

               Cow position:
               chr3:36375514-36375346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 43
               

               Conread position:
               34-198
               

               Cow position:
               chr3:53083960-53083795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 142
               

               Conread position:
               34-198
               

               Cow position:
               chr3:66639796-66639951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               34-199
               

               Cow position:
               chr3:74050676-74050515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               34-200
               

               Cow position:
               chr3:2025224-2025400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               34-200
               

               Cow position:
               chr3:11607848-11608011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               34-200
               

               Cow position:
               chr3:15159057-15159222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 124
               

               Conread position:
               34-204
               

               Cow position:
               chr3:75107800-75107965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               103, 77
               

               Conread position:
               34-205
               

               Cow position:
               chr3:9663146-9662973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               75, 158
               

               Conread position:
               34-205
               

               Cow position:
               chr3:59920053-59920240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               34-209
               

               Cow position:
               chr3:28896996-28896819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               34-217
               

               Cow position:
               chr3:76056259-76056077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               34-222
               

               Cow position:
               chr3:70402670-70402853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               35-165
               

               Cow position:
               chr3:84250517-84250392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               35-166
               

               Cow position:
               chr3:72556796-72556923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 59
               

               Conread position:
               35-168
               

               Cow position:
               chr3:5737778-5737906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               35-168
               

               Cow position:
               chr3:17531711-17531576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-169
               

               Cow position:
               chr3:5003660-5003793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               35-171
               

               Cow position:
               chr3:10115325-10115458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               35-171
               

               Cow position:
               chr3:74787453-74787588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 59
               

               Conread position:
               35-172
               

               Cow position:
               chr3:51609159-51609020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               35-172
               

               Cow position:
               chr3:79196786-79196927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               35-174
               

               Cow position:
               chr3:26603525-26603380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-174
               

               Cow position:
               chr3:62312822-62312964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-174
               

               Cow position:
               chr3:62370081-62370223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-177
               

               Cow position:
               chr3:3292492-3292625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               35-177
               

               Cow position:
               chr3:20021296-20021437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-178
               

               Cow position:
               chr3:7661879-7662027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-178
               

               Cow position:
               chr3:22676083-22675937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               50, 81
               

               Conread position:
               35-178
               

               Cow position:
               chr3:63860584-63860440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               35-179
               

               Cow position:
               chr3:1037049-1037199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               35-179
               

               Cow position:
               chr3:8061153-8061291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               35-179
               

               Cow position:
               chr3:14547029-14547170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               35-179
               

               Cow position:
               chr3:15153718-15153859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               35-179
               

               Cow position:
               chr3:17058519-17058376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 68
               

               Conread position:
               35-179
               

               Cow position:
               chr3:26970840-26970982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               35-179
               

               Cow position:
               chr3:46559688-46559545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 45
               

               Conread position:
               35-179
               

               Cow position:
               chr3:53150358-53150504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               35-179
               

               Cow position:
               chr3:77582132-77582277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               35-179
               

               Cow position:
               chr3:78093362-78093222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               35-181
               

               Cow position:
               chr3:81234416-81234561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-182
               

               Cow position:
               chr3:23753517-23753658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               35-182
               

               Cow position:
               chr3:74515311-74515162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr3:2392942-2392794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               35-183
               

               Cow position:
               chr3:2675056-2675207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr3:16867850-16867997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               35-183
               

               Cow position:
               chr3:18479271-18479121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 24
               

               Conread position:
               35-183
               

               Cow position:
               chr3:23105335-23105190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               35-183
               

               Cow position:
               chr3:23640370-23640514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               102, 58
               

               Conread position:
               35-183
               

               Cow position:
               chr3:43389101-43388950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr3:52652053-52651905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               99, 64
               

               Conread position:
               35-183
               

               Cow position:
               chr3:52845583-52845730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               35-183
               

               Cow position:
               chr3:58527409-58527552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               107, 68
               

               Conread position:
               35-183
               

               Cow position:
               chr3:59947692-59947843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               35-183
               

               Cow position:
               chr3:62186178-62186333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr3:64910069-64909920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               35-183
               

               Cow position:
               chr3:69785597-69785445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 85
               

               Conread position:
               35-183
               

               Cow position:
               chr3:73395143-73395290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               35-183
               

               Cow position:
               chr3:73925011-73924865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               35-184
               

               Cow position:
               chr3:19709137-19709281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               35-184
               

               Cow position:
               chr3:26393273-26393123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               35-184
               

               Cow position:
               chr3:44218792-44218944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               35-184
               

               Cow position:
               chr3:81087613-81087460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               35-186
               

               Cow position:
               chr3:48363099-48363247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               35-186
               

               Cow position:
               chr3:51234069-51233926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 63
               

               Conread position:
               35-186
               

               Cow position:
               chr3:54905641-54905784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               35-187
               

               Cow position:
               chr3:2016462-2016611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               35-187
               

               Cow position:
               chr3:3883788-3883641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 26
               

               Conread position:
               35-187
               

               Cow position:
               chr3:8349536-8349392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               35-187
               

               Cow position:
               chr3:11229338-11229192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 63
               

               Conread position:
               35-187
               

               Cow position:
               chr3:15051924-15051773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               35-187
               

               Cow position:
               chr3:15973593-15973749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:23203204-23203050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               35-187
               

               Cow position:
               chr3:28902732-28902583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               35-187
               

               Cow position:
               chr3:29807768-29807912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:31350077-31349929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 55
               

               Conread position:
               35-187
               

               Cow position:
               chr3:45881925-45882078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:48900306-48900151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:51402928-51403075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               35-187
               

               Cow position:
               chr3:54557701-54557845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               35-187
               

               Cow position:
               chr3:55730442-55730286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:56943899-56943751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-187
               

               Cow position:
               chr3:59474149-59474299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               108, 66
               

               Conread position:
               35-187
               

               Cow position:
               chr3:59597205-59597352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-187
               

               Cow position:
               chr3:62046691-62046851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:64280903-64280761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               35-187
               

               Cow position:
               chr3:68004675-68004530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:75050591-75050444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               35-187
               

               Cow position:
               chr3:75907938-75908090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               35-187
               

               Cow position:
               chr3:76156014-76156165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-187
               

               Cow position:
               chr3:76269919-76270067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               35-187
               

               Cow position:
               chr3:76300798-76300953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:77365263-77365113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               35-187
               

               Cow position:
               chr3:78071764-78071613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               35-187
               

               Cow position:
               chr3:78077212-78077369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               35-187
               

               Cow position:
               chr3:80958485-80958330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:83325239-83325386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               35-187
               

               Cow position:
               chr3:83455124-83454978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               35-187
               

               Cow position:
               chr3:84137788-84137633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               35-188
               

               Cow position:
               chr3:22221354-22221506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 78
               

               Conread position:
               35-188
               

               Cow position:
               chr3:31804732-31804590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               102, 33
               

               Conread position:
               35-188
               

               Cow position:
               chr3:45314371-45314532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               35-188
               

               Cow position:
               chr3:65413251-65413086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               35-188
               

               Cow position:
               chr3:73701534-73701678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               35-189
               

               Cow position:
               chr3:59681877-59681725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               102, 69
               

               Conread position:
               35-192
               

               Cow position:
               chr3:47199100-47198940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               69, 123
               

               Conread position:
               35-192
               

               Cow position:
               chr3:56476709-56476854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               35-193
               

               Cow position:
               chr3:2506451-2506291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               67, 15
               

               Conread position:
               35-194
               

               Cow position:
               chr3:18831452-18831606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               35-194
               

               Cow position:
               chr3:41366683-41366511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-194
               

               Cow position:
               chr3:44724888-44725054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               35-194
               

               Cow position:
               chr3:55318870-55318710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               35-194
               

               Cow position:
               chr3:74127482-74127312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               35-195
               

               Cow position:
               chr3:29234654-29234491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               35-195
               

               Cow position:
               chr3:49787585-49787744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               35-195
               

               Cow position:
               chr3:59702195-59702359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               35-195
               

               Cow position:
               chr3:68303341-68303505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               35-195
               

               Cow position:
               chr3:71231422-71231587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               35-196
               

               Cow position:
               chr3:3889541-3889389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               35-196
               

               Cow position:
               chr3:10591477-10591326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               101, 62
               

               Conread position:
               35-196
               

               Cow position:
               chr3:15443702-15443538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               35-196
               

               Cow position:
               chr3:22165389-22165231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               101, 147
               

               Conread position:
               35-196
               

               Cow position:
               chr3:23132142-23131982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               101, 147
               

               Conread position:
               35-196
               

               Cow position:
               chr3:24774680-24774830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               35-196
               

               Cow position:
               chr3:41510603-41510766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               35-196
               

               Cow position:
               chr3:49344720-49344880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               35-196
               

               Cow position:
               chr3:49482689-49482524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               35-196
               

               Cow position:
               chr3:55106122-55105958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               35-196
               

               Cow position:
               chr3:68587049-68587209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               35-196
               

               Cow position:
               chr3:77098796-77098638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 82
               

               Conread position:
               35-196
               

               Cow position:
               chr3:84807301-84807136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 117
               

               Conread position:
               35-197
               

               Cow position:
               chr3:986041-986200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 38
               

               Conread position:
               35-197
               

               Cow position:
               chr3:24596396-24596242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               145, 67
               

               Conread position:
               35-197
               

               Cow position:
               chr3:35074905-35075060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 67
               

               Conread position:
               35-197
               

               Cow position:
               chr3:44594648-44594808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               85, 142
               

               Conread position:
               35-197
               

               Cow position:
               chr3:47753253-47753426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               35-197
               

               Cow position:
               chr3:53222040-53222199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               35-197
               

               Cow position:
               chr3:68156750-68156918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 117
               

               Conread position:
               35-197
               

               Cow position:
               chr3:68648201-68648363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 42
               

               Conread position:
               35-197
               

               Cow position:
               chr3:69849266-69849110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               35-197
               

               Cow position:
               chr3:73410313-73410474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               35-197
               

               Cow position:
               chr3:79398169-79398336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:3556572-3556741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:6265812-6265980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               35-198
               

               Cow position:
               chr3:7381806-7381640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 42
               

               Conread position:
               35-198
               

               Cow position:
               chr3:9718225-9718060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               35-198
               

               Cow position:
               chr3:11281793-11281956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               74, 148
               

               Conread position:
               35-198
               

               Cow position:
               chr3:15859352-15859195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               35-198
               

               Cow position:
               chr3:22078102-22078270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:22924348-22924190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               35-198
               

               Cow position:
               chr3:23920402-23920235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:24468358-24468197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               35-198
               

               Cow position:
               chr3:34871594-34871759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               35-198
               

               Cow position:
               chr3:48468200-48468368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:53428890-53428728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               35-198
               

               Cow position:
               chr3:53604719-53604558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               35-198
               

               Cow position:
               chr3:58929508-58929341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               35-198
               

               Cow position:
               chr3:65308427-65308258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               35-198
               

               Cow position:
               chr3:66885003-66884841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               35-198
               

               Cow position:
               chr3:68616303-68616150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               35-198
               

               Cow position:
               chr3:68624244-68624410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 80
               

               Conread position:
               35-198
               

               Cow position:
               chr3:72027663-72027829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               35-198
               

               Cow position:
               chr3:78258728-78258560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               35-199
               

               Cow position:
               chr3:2636976-2637138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               35-199
               

               Cow position:
               chr3:2648483-2648314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 58
               

               Conread position:
               35-199
               

               Cow position:
               chr3:10958213-10958057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               35-199
               

               Cow position:
               chr3:27286545-27286705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 69
               

               Conread position:
               35-199
               

               Cow position:
               chr3:30180113-30180276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               105, 73
               

               Conread position:
               35-199
               

               Cow position:
               chr3:46259737-46259903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               35-199
               

               Cow position:
               chr3:71497111-71496940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 159
               

               Conread position:
               35-199
               

               Cow position:
               chr3:72342272-72342435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               85, 149
               

               Conread position:
               35-199
               

               Cow position:
               chr3:83474772-83474945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               35-200
               

               Cow position:
               chr3:11027301-11027464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               74, 149
               

               Conread position:
               35-200
               

               Cow position:
               chr3:16710773-16710606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 44
               

               Conread position:
               35-200
               

               Cow position:
               chr3:19585890-19586054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 150
               

               Conread position:
               35-200
               

               Cow position:
               chr3:22903726-22903565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               102, 68
               

               Conread position:
               35-200
               

               Cow position:
               chr3:55177719-55177561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               101, 78
               

               Conread position:
               35-200
               

               Cow position:
               chr3:55970534-55970707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               35-200
               

               Cow position:
               chr3:68565848-68566003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               35-200
               

               Cow position:
               chr3:69650862-69650705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               153, 81
               

               Conread position:
               35-200
               

               Cow position:
               chr3:70333195-70333035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               102, 57
               

               Conread position:
               35-200
               

               Cow position:
               chr3:83705511-83705341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               35-201
               

               Cow position:
               chr3:4071744-4071577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               35-201
               

               Cow position:
               chr3:27976497-27976329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 89
               

               Conread position:
               35-201
               

               Cow position:
               chr3:31896930-31896772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               35-201
               

               Cow position:
               chr3:44959969-44960141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               35-201
               

               Cow position:
               chr3:48537389-48537563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               35-201
               

               Cow position:
               chr3:52487641-52487824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               35-201
               

               Cow position:
               chr3:59317729-59317895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               35-201
               

               Cow position:
               chr3:63069339-63069166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               35-203
               

               Cow position:
               chr3:37641353-37641518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               66, 84
               

               Conread position:
               35-203
               

               Cow position:
               chr3:68094171-68094349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               35-204
               

               Cow position:
               chr3:14601677-14601516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               35-204
               

               Cow position:
               chr3:41863652-41863818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               100, 80
               

               Conread position:
               35-204
               

               Cow position:
               chr3:45743937-45744107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 12
               

               Conread position:
               35-204
               

               Cow position:
               chr3:50768706-50768876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               35-204
               

               Cow position:
               chr3:60597568-60597733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               35-205
               

               Cow position:
               chr3:1517485-1517312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 67
               

               Conread position:
               35-205
               

               Cow position:
               chr3:75966757-75966585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               35-207
               

               Cow position:
               chr3:40213007-40212838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 42
               

               Conread position:
               35-208
               

               Cow position:
               chr3:62789928-62789750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               35-210
               

               Cow position:
               chr3:32248038-32248211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 42
               

               Conread position:
               35-212
               

               Cow position:
               chr3:53270857-53271036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 175
               

               Conread position:
               35-213
               

               Cow position:
               chr3:35079481-35079298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               35-215
               

               Cow position:
               chr3:14211956-14211779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 68
               

               Conread position:
               35-279
               

               Cow position:
               chr3:17222115-17221858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 195
               

               Conread position:
               35-279
               

               Cow position:
               chr3:77653954-77654188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               36-149
               

               Cow position:
               chr3:35582868-35582982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               36-174
               

               Cow position:
               chr3:83199539-83199679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 58
               

               Conread position:
               36-183
               

               Cow position:
               chr3:2637954-2638108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               36-183
               

               Cow position:
               chr3:17331750-17331894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               36-183
               

               Cow position:
               chr3:44782367-44782513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               100, 78
               

               Conread position:
               36-183
               

               Cow position:
               chr3:60371010-60371159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               73, 110
               

               Conread position:
               36-185
               

               Cow position:
               chr3:6886249-6886403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               36-186
               

               Cow position:
               chr3:23037481-23037330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               81, 50
               

               Conread position:
               36-186
               

               Cow position:
               chr3:43896032-43895885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               36-186
               

               Cow position:
               chr3:50350939-50350800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 51
               

               Conread position:
               36-187
               

               Cow position:
               chr3:12705515-12705369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               101, 39
               

               Conread position:
               36-192
               

               Cow position:
               chr3:19641086-19641249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               36-196
               

               Cow position:
               chr3:29813259-29813415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               36-197
               

               Cow position:
               chr3:84154442-84154593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 37
               

               Conread position:
               36-198
               

               Cow position:
               chr3:12090701-12090868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               36-198
               

               Cow position:
               chr3:74234214-74234371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               139
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               100, 81
               

               Conread position:
               36-199
               

               Cow position:
               chr3:57704361-57704522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               100, 81
               

               Conread position:
               36-200
               

               Cow position:
               chr3:4549055-4549208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               36-200
               

               Cow position:
               chr3:19611324-19611161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               104, 66
               

               Conread position:
               36-201
               

               Cow position:
               chr3:23818519-23818680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               101, 51
               

               Conread position:
               36-209
               

               Cow position:
               chr3:18700083-18699905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               37-171
               

               Cow position:
               chr3:40145493-40145630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               37-179
               

               Cow position:
               chr3:75608527-75608659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               37-180
               

               Cow position:
               chr3:70756613-70756467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               37-184
               

               Cow position:
               chr3:59610689-59610543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               37-185
               

               Cow position:
               chr3:61224715-61224572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               37-186
               

               Cow position:
               chr3:40958098-40957950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               100, 66
               

               Conread position:
               37-186
               

               Cow position:
               chr3:60186172-60186331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               37-187
               

               Cow position:
               chr3:21959688-21959844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               37-187
               

               Cow position:
               chr3:27246930-27246788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 62
               

               Conread position:
               37-187
               

               Cow position:
               chr3:31361454-31361603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 67
               

               Conread position:
               37-187
               

               Cow position:
               chr3:48072853-48072707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               37-187
               

               Cow position:
               chr3:73589742-73589587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               37-192
               

               Cow position:
               chr3:18471330-18471485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               65, 146
               

               Conread position:
               37-192
               

               Cow position:
               chr3:74644586-74644744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               37-195
               

               Cow position:
               chr3:18059732-18059893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               37-195
               

               Cow position:
               chr3:61023994-61023834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 143
               

               Conread position:
               37-197
               

               Cow position:
               chr3:21867009-21866853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 72
               

               Conread position:
               37-197
               

               Cow position:
               chr3:53875736-53875575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 152
               

               Conread position:
               37-197
               

               Cow position:
               chr3:54506736-54506896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 65
               

               Conread position:
               37-198
               

               Cow position:
               chr3:31309325-31309168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 118
               

               Conread position:
               37-204
               

               Cow position:
               chr3:3262805-3262627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               38-184
               

               Cow position:
               chr3:71474374-71474231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               38-187
               

               Cow position:
               chr3:4461454-4461311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               38-187
               

               Cow position:
               chr3:16333827-16333983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               38-187
               

               Cow position:
               chr3:23804535-23804680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               38-187
               

               Cow position:
               chr3:71238183-71238326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               38-192
               

               Cow position:
               chr3:66354708-66354867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               38-197
               

               Cow position:
               chr3:18764131-18764292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 147
               

               Conread position:
               38-198
               

               Cow position:
               chr3:18686936-18687092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               98, 60
               

               Conread position:
               38-198
               

               Cow position:
               chr3:58497687-58497847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 26
               

               Conread position:
               39-197
               

               Cow position:
               chr3:57641830-57641993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               40-198
               

               Cow position:
               chr3:59299608-59299762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 48
               

               Conread position:
               40-200
               

               Cow position:
               chr3:77665520-77665361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               41-196
               

               Cow position:
               chr3:24370434-24370579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               44-170
               

               Cow position:
               chr3:25289880-25290005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               44-184
               

               Cow position:
               chr3:25735870-25735727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               44-187
               

               Cow position:
               chr3:53249524-53249664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               44-198
               

               Cow position:
               chr3:51578088-51577937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 98
               

               Conread position:
               44-200
               

               Cow position:
               chr3:7408471-7408626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 145
               

               Conread position:
               44-200
               

               Cow position:
               chr3:32436671-32436826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               44-218
               

               Cow position:
               chr3:82425043-82424871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               45-195
               

               Cow position:
               chr3:61680351-61680502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 139
               

               Conread position:
               45-199
               

               Cow position:
               chr3:39967452-39967305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               91, 54
               

               Conread position:
               46-199
               

               Cow position:
               chr3:30266658-30266504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               46-209
               

               Cow position:
               chr3:84250789-84250624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               47-185
               

               Cow position:
               chr3:52608221-52608358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               47-197
               

               Cow position:
               chr3:34392182-34392039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               47-197
               

               Cow position:
               chr3:63844976-63845129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 30
               

               Conread position:
               48-203
               

               Cow position:
               chr3:26977579-26977731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               49-194
               

               Cow position:
               chr3:83671896-83672041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               49-198
               

               Cow position:
               chr3:74939627-74939772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               49-199
               

               Cow position:
               chr3:39902473-39902320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               50-183
               

               Cow position:
               chr3:21081344-21081205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               50-186
               

               Cow position:
               chr3:18426658-18426522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               50-187
               

               Cow position:
               chr3:58562740-58562880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               55-184
               

               Cow position:
               chr3:19044724-19044592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               55-184
               

               Cow position:
               chr3:41826286-41826160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               55-200
               

               Cow position:
               chr3:75105065-75104924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               55-212
               

               Cow position:
               chr3:70632191-70632347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               56-196
               

               Cow position:
               chr3:76138505-76138648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               56-198
               

               Cow position:
               chr3:42933528-42933675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               59-186
               

               Cow position:
               chr3:77650634-77650760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               60-212
               

               Cow position:
               chr3:61190479-61190328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               63-183
               

               Cow position:
               chr3:2434682-2434563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               74, 5
               

               Conread position:
               63-199
               

               Cow position:
               chr3:3877339-3877211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               67-196
               

               Cow position:
               chr3:17401437-17401561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               67-204
               

               Cow position:
               chr3:66563841-66563981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               68-223
               

               Cow position:
               chr3:3887580-3887424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 137
               

               Conread position:
               70-187
               

               Cow position:
               chr3:15057582-15057463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               76-192
               

               Cow position:
               chr3:49369679-49369793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               100-215
               

               Cow position:
               chr3:27670564-27670677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 90
               
Show alignments to all cow chromosomes.
Conread position:	1-121
Cow position:	chr3:20677857-20677729 (view UCSC Genome Browser custom track)
Alignm length:	129
Alignm identity:	106
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	34, 0
Conread position:	1-171
Cow position:	chr3:74079654-74079475 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	143
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	29, 126
Conread position:	1-179
Cow position:	chr3:74533331-74533505 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	133
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	41, 69
Conread position:	1-183
Cow position:	chr3:44932498-44932687 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	146
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	36, 124
Conread position:	1-184
Cow position:	chr3:9120827-9121018 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	150
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	37, 161
Conread position:	1-186
Cow position:	chr3:16752276-16752076 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	151
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	35, 0
Conread position:	1-187
Cow position:	chr3:13353346-13353543 (view UCSC Genome Browser custom track)
Alignm length:	199
Alignm identity:	143
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	34, 118
Conread position:	1-194
Cow position:	chr3:23408374-23408180 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	160
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	27, 111
Conread position:	1-195
Cow position:	chr3:53790554-53790355 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	157
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	29, 119
Conread position:	1-197
Cow position:	chr3:15950931-15950731 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	163
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	27, 98
Conread position:	1-198
Cow position:	chr3:59604828-59605031 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	174
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 121
Conread position:	1-199
Cow position:	chr3:26065981-26066178 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	151
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	36, 17
Conread position:	1-200
Cow position:	chr3:64196808-64197019 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	167
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	35, 127
Conread position:	1-203
Cow position:	chr3:19788848-19788646 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	164
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	28, 127
Conread position:	1-204
Cow position:	chr3:54946113-54946317 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	160
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	30, 112
Conread position:	1-206
Cow position:	chr3:70762138-70761925 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	171
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	34, 126
Conread position:	1-209
Cow position:	chr3:9117009-9117236 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	165
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	25, 219
Conread position:	1-246
Cow position:	chr3:7337800-7337550 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	184
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	33, 125
Conread position:	2-197
Cow position:	chr3:6182238-6182044 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	155
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	28, 108
Conread position:	2-236
Cow position:	chr3:33002370-33002616 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	188
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	36, 115