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Cow genome map

           
Conread name:
           
rche14_m4.y1
        

               
Conread position:
               
1-109
               

               
Cow position:
               
chr4:36744579-36744696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr4:44903293-44903418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr4:60506275-60506454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 164
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:54478919-54478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr4:34653870-34653694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:13995386-13995571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr4:22010056-22009875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr4:48485993-48486186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr4:61887635-61887831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr4:23600166-23600360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 164
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr4:16221878-16221679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 169
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr4:65919610-65919810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr4:19744887-19745064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:19700097-19700302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:28772068-28771875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:51728076-51728269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 111
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr4:60719100-60719287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr4:32601836-32602023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr4:27530117-27530314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr4:54455343-54455144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr4:44854292-44854085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 199
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:25356319-25356125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr4:33838801-33838599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:37991591-37991794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:38209976-38209769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:47730857-47731065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:59002140-59001932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr4:69290744-69290536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 200
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr4:561631-561835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr4:25722-25524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:42423806-42423589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 127
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr4:46404905-46404702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr4:20027104-20026890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr4:46566471-46566260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr4:19431697-19431473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
2-144
               

               
Cow position:
               
chr4:63964988-63964839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr4:68358340-68358517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr4:386392-386197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr4:60761644-60761850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
2-201
               

               
Cow position:
               
chr4:64192184-64191970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr4:60621587-60621416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 6
               

               
Conread position:
               
3-177
               

               
Cow position:
               
chr4:48381382-48381575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr4:11897294-11897115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr4:45724869-45725058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
3-187
               

               
Cow position:
               
chr4:62983552-62983363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:20142905-20142705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
3-198
               

               
Cow position:
               
chr4:37915334-37915132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr4:39007508-39007701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr4:49800696-49800882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr4:51083336-51083148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr4:24810447-24810248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
5-178
               

               
Cow position:
               
chr4:23509599-23509777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
5-199
               

               
Cow position:
               
chr4:214019-214218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
6-197
               

               
Cow position:
               
chr4:14131441-14131626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr4:48152366-48152180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr4:59277474-59277267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
13-188
               

               
Cow position:
               
chr4:59755624-59755455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
25-171
               

               
Cow position:
               
chr4:17124278-17124130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
25-187
               

               
Cow position:
               
chr4:10786106-10785945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
25-197
               

               
Cow position:
               
chr4:47748445-47748616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 67
               

               
Conread position:
               
29-192
               

               
Cow position:
               
chr4:15905140-15905308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 48
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr4:12920370-12920541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 109
               

               
Conread position:
               
30-192
               

               
Cow position:
               
chr4:69169684-69169849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
30-195
               

               
Cow position:
               
chr4:23985086-23984916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
30-200
               

               
Cow position:
               
chr4:19503967-19504131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
30-203
               

               
Cow position:
               
chr4:12867142-12867310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 64
               

               
Conread position:
               
31-186
               

               
Cow position:
               
chr4:18099022-18098867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
31-199
               

               
Cow position:
               
chr4:2774759-2774930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
34-174
               

               
Cow position:
               
chr4:27511587-27511730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
34-175
               

               
Cow position:
               
chr4:36070745-36070885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
34-178
               

               
Cow position:
               
chr4:19407954-19407805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr4:27276501-27276358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 84
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr4:29384192-29384054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 65
               

               
Conread position:
               
34-183
               

               
Cow position:
               
chr4:20147226-20147376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
34-185
               

               
Cow position:
               
chr4:38157045-38156900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr4:10958618-10958463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr4:37732440-37732284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr4:42231981-42231838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
34-187
               

               
Cow position:
               
chr4:58018388-58018537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 74
               

               
Conread position:
               
34-188
               

               
Cow position:
               
chr4:2628571-2628725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 148
               

               
Conread position:
               
34-188
               

               
Cow position:
               
chr4:61391184-61391039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
34-190
               

               
Cow position:
               
chr4:60678019-60678176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 65
               

               
Conread position:
               
34-193
               

               
Cow position:
               
chr4:34722845-34722684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
34-195
               

               
Cow position:
               
chr4:66168289-66168135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
34-196
               

               
Cow position:
               
chr4:42608781-42608942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr4:12713984-12713830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr4:42044932-42044769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
34-198
               

               
Cow position:
               
chr4:45773505-45773674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 39
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr4:13194007-13194165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
34-199
               

               
Cow position:
               
chr4:19578430-19578591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 69
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr4:3299748-3299592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr4:19463587-19463756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr4:43909804-43909972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
34-200
               

               
Cow position:
               
chr4:53941754-53941590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
34-201
               

               
Cow position:
               
chr4:59557483-59557650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
34-201
               

               
Cow position:
               
chr4:63293502-63293663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
34-202
               

               
Cow position:
               
chr4:65173145-65173311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
34-203
               

               
Cow position:
               
chr4:14020539-14020712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
34-203
               

               
Cow position:
               
chr4:66547725-66547553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 151
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr4:17774307-17774153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr4:20115973-20115799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 118
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr4:33181587-33181754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
34-204
               

               
Cow position:
               
chr4:52823359-52823190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 83
               

               
Conread position:
               
35-146
               

               
Cow position:
               
chr4:46476902-46476784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-148
               

               
Cow position:
               
chr4:27425755-27425865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-150
               

               
Cow position:
               
chr4:60141478-60141366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
35-159
               

               
Cow position:
               
chr4:3268321-3268203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
35-171
               

               
Cow position:
               
chr4:45775294-45775151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr4:4320947-4320810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-175
               

               
Cow position:
               
chr4:43740578-43740714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr4:29805330-29805184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr4:39569247-39569382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-177
               

               
Cow position:
               
chr4:48137987-48138130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr4:13919021-13919165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr4:27691629-27691484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
35-178
               

               
Cow position:
               
chr4:40414584-40414441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 82
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:3421666-3421811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:19102838-19102689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:22215467-22215326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:22482369-22482507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:27699075-27699227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:42374112-42373968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:46761651-46761797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:50131560-50131709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:52831973-52831828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
35-179
               

               
Cow position:
               
chr4:62370360-62370496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 44
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr4:20153505-20153364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 42
               

               
Conread position:
               
35-182
               

               
Cow position:
               
chr4:50687817-50687675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:4085067-4084917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:6073011-6072860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:8675412-8675558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:10732267-10732412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:13693628-13693483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:19420713-19420564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:38949493-38949337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:46136794-46136940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:47048161-47048305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 82
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:50494815-50494970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
35-183
               

               
Cow position:
               
chr4:59105639-59105494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr4:12908417-12908561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr4:27657020-27657164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr4:47230954-47230804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr4:56746033-56746186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
35-184
               

               
Cow position:
               
chr4:61524476-61524621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr4:22127963-22127821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr4:28660507-28660352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr4:41370897-41370747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr4:59015632-59015774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
35-186
               

               
Cow position:
               
chr4:62794320-62794162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:1015114-1015266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:10558580-10558731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:12052285-12052142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:13344582-13344731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:21874219-21874373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:28854231-28854081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:29318032-29317873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 130
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:30691047-30691197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:34641682-34641528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:38946259-38946415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:45483842-45483999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 43
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:45583079-45582926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 113
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:45840442-45840587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:46435368-46435529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:46656173-46656329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:49212697-49212554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:51769147-51769300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:61451257-61451413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:61608921-61608771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-187
               

               
Cow position:
               
chr4:66412230-66412378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr4:23271326-23271480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
35-188
               

               
Cow position:
               
chr4:35638859-35638710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr4:3340996-3341152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
35-189
               

               
Cow position:
               
chr4:34630942-34631104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
35-190
               

               
Cow position:
               
chr4:61286588-61286735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr4:27632487-27632643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr4:30250227-30250083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-192
               

               
Cow position:
               
chr4:34022541-34022388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-193
               

               
Cow position:
               
chr4:1026193-1026035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr4:23925341-23925174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 155
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr4:32693832-32693992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
35-194
               

               
Cow position:
               
chr4:53347931-53347777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 41
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:479748-479598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:17186307-17186147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 148
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:21112528-21112371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:45250014-45250174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:45963927-45964093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
35-195
               

               
Cow position:
               
chr4:55694218-55694377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:7043776-7043615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
63, 148
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:19496538-19496704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:25197451-25197286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:46494347-46494505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:49158751-49158586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:54881033-54880868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
35-196
               

               
Cow position:
               
chr4:56307846-56308003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:5250231-5250392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:6094022-6093862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:9444643-9444479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 150
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:12127595-12127435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:22713448-22713295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:23847007-23846846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
102, 45
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:30769079-30769239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:38944214-38944052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 82
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:44927497-44927340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:46176255-46176089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:68076495-68076334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
35-197
               

               
Cow position:
               
chr4:68776979-68777142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:508865-508705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
156, 64
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:3519465-3519626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:17051242-17051079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:19119061-19119224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:19199243-19199075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:22071628-22071466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:23757812-23757978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:34983455-34983296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:35982043-35982203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:40995774-40995942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:47038811-47038972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 147
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:47262578-47262746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 63
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:53050036-53050197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:56395556-56395722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:56852891-56853060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
69, 125
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:62472123-62472276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
35-198
               

               
Cow position:
               
chr4:65463465-65463310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:501639-501463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:5790686-5790852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 149
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:10915792-10915627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:21161149-21161311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:21506912-21506760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:34509884-34510036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:38940899-38940734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
35-199
               

               
Cow position:
               
chr4:39010093-39010261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:2713816-2713648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:8083754-8083602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:11506739-11506579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:19573328-19573493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 154
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:22101221-22101056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:26959925-26959759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:30935320-30935151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 150
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:31177868-31178029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
102, 74
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:32561873-32562040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:52748413-52748253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:62821012-62820851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 68
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr4:63078266-63078430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 149
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:25802734-25802906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:28839661-28839816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:33089884-33089715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:46669020-46669190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 152
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:47283969-47283802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:56410389-56410555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
35-201
               

               
Cow position:
               
chr4:60527224-60527386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
35-202
               

               
Cow position:
               
chr4:8182593-8182425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr4:2681373-2681539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr4:13668578-13668410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
35-203
               

               
Cow position:
               
chr4:38350156-38349983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr4:12716852-12716695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr4:22331168-22331331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr4:36876814-36876647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr4:47305121-47305294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr4:58248445-58248617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr4:4647443-4647620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
35-205
               

               
Cow position:
               
chr4:25929260-25929424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
35-206
               

               
Cow position:
               
chr4:30943998-30944167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
35-206
               

               
Cow position:
               
chr4:68387836-68388001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr4:40392859-40393026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 33
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr4:65825782-65825607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 147
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr4:19238261-19238436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
35-211
               

               
Cow position:
               
chr4:58045592-58045409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
35-213
               

               
Cow position:
               
chr4:2770117-2770288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
102, 58
               

               
Conread position:
               
35-279
               

               
Cow position:
               
chr4:32458816-32458581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 149
               

               
Conread position:
               
36-172
               

               
Cow position:
               
chr4:972737-972602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
36-174
               

               
Cow position:
               
chr4:19122917-19123052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 72
               

               
Conread position:
               
36-177
               

               
Cow position:
               
chr4:14964873-14965000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr4:17790247-17790109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
36-179
               

               
Cow position:
               
chr4:19708984-19709130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
36-181
               

               
Cow position:
               
chr4:48693643-48693784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
106, 61
               

               
Conread position:
               
36-183
               

               
Cow position:
               
chr4:19496941-19496788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
36-185
               

               
Cow position:
               
chr4:11186008-11186161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr4:43916333-43916487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr4:49808562-49808712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr4:29236897-29236737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
36-187
               

               
Cow position:
               
chr4:31136800-31136950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
36-192
               

               
Cow position:
               
chr4:67393136-67393296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-197
               

               
Cow position:
               
chr4:17076234-17076071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr4:4319107-4318947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
36-201
               

               
Cow position:
               
chr4:26012446-26012624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
36-201
               

               
Cow position:
               
chr4:44772998-44772827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
36-204
               

               
Cow position:
               
chr4:19200157-19200317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
36-207
               

               
Cow position:
               
chr4:63261515-63261689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
36-208
               

               
Cow position:
               
chr4:63198327-63198152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr4:617336-617158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr4:18952018-18952199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr4:56591082-56591263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
36-239
               

               
Cow position:
               
chr4:59785367-59785575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
37-160
               

               
Cow position:
               
chr4:53380733-53380859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
37-172
               

               
Cow position:
               
chr4:23646812-23646690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr4:19501046-19500901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
37-179
               

               
Cow position:
               
chr4:41907536-41907395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr4:26659345-26659491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
37-183
               

               
Cow position:
               
chr4:35939688-35939551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
37-184
               

               
Cow position:
               
chr4:21531598-21531448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
37-186
               

               
Cow position:
               
chr4:51617953-51617802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr4:12676845-12676990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
37-187
               

               
Cow position:
               
chr4:49794705-49794845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr4:85740-85890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr4:4084404-4084261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
37-188
               

               
Cow position:
               
chr4:61999152-61999002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
37-194
               

               
Cow position:
               
chr4:19435301-19435448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr4:48322082-48322241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
37-195
               

               
Cow position:
               
chr4:50837747-50837904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 150
               

               
Conread position:
               
37-197
               

               
Cow position:
               
chr4:7816338-7816504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 152
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr4:36290670-36290827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
99, 67
               

               
Conread position:
               
37-198
               

               
Cow position:
               
chr4:43579367-43579210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
37-199
               

               
Cow position:
               
chr4:60302961-60302807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
37-200
               

               
Cow position:
               
chr4:17851207-17851053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-201
               

               
Cow position:
               
chr4:19315962-19315793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
37-205
               

               
Cow position:
               
chr4:23451048-23450878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
37-208
               

               
Cow position:
               
chr4:36841312-36841475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
103, 41
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr4:54315180-54315008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
37-210
               

               
Cow position:
               
chr4:45706085-45706256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
37-213
               

               
Cow position:
               
chr4:29291560-29291724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
99, 56
               

               
Conread position:
               
37-215
               

               
Cow position:
               
chr4:7964602-7964424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
38-155
               

               
Cow position:
               
chr4:37313212-37313334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr4:44024496-44024352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
38-179
               

               
Cow position:
               
chr4:51026397-51026538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr4:19330723-19330581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr4:27521599-27521751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
38-183
               

               
Cow position:
               
chr4:46883624-46883476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
38-184
               

               
Cow position:
               
chr4:66122320-66122177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
38-184
               

               
Cow position:
               
chr4:68590818-68590961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr4:44184068-44183924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
38-187
               

               
Cow position:
               
chr4:54785882-54785735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr4:19333433-19333584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
38-194
               

               
Cow position:
               
chr4:19542983-19543145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
38-195
               

               
Cow position:
               
chr4:22138174-22138012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
38-196
               

               
Cow position:
               
chr4:69455581-69455423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
38-198
               

               
Cow position:
               
chr4:3283400-3283251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 56
               

               
Conread position:
               
39-178
               

               
Cow position:
               
chr4:13590131-13590273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
39-179
               

               
Cow position:
               
chr4:69497163-69497300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
39-201
               

               
Cow position:
               
chr4:11969501-11969665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
40-185
               

               
Cow position:
               
chr4:49880646-49880512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
40-188
               

               
Cow position:
               
chr4:68456872-68456720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
40-199
               

               
Cow position:
               
chr4:11099606-11099453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
41-183
               

               
Cow position:
               
chr4:60363398-60363542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
41-186
               

               
Cow position:
               
chr4:51867253-51867393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 62
               

               
Conread position:
               
41-196
               

               
Cow position:
               
chr4:12245259-12245412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
95, 138
               

               
Conread position:
               
44-177
               

               
Cow position:
               
chr4:66172738-66172610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
44-196
               

               
Cow position:
               
chr4:13508186-13508035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
45-187
               

               
Cow position:
               
chr4:299202-299345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
46-178
               

               
Cow position:
               
chr4:8389027-8388893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
46-183
               

               
Cow position:
               
chr4:34544361-34544496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
47-183
               

               
Cow position:
               
chr4:5276402-5276267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 106
               

               
Conread position:
               
47-187
               

               
Cow position:
               
chr4:12666086-12666226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
48-183
               

               
Cow position:
               
chr4:14504982-14504857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
49-198
               

               
Cow position:
               
chr4:63183624-63183478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
50-183
               

               
Cow position:
               
chr4:51851271-51851403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
50-183
               

               
Cow position:
               
chr4:69305687-69305826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
50-187
               

               
Cow position:
               
chr4:63596423-63596567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
50-199
               

               
Cow position:
               
chr4:3687987-3688132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
50-200
               

               
Cow position:
               
chr4:19328643-19328788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
50-205
               

               
Cow position:
               
chr4:1419286-1419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
51-195
               

               
Cow position:
               
chr4:656746-656604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
52-187
               

               
Cow position:
               
chr4:10962535-10962389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
52-197
               

               
Cow position:
               
chr4:34919213-34919071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
54-171
               

               
Cow position:
               
chr4:16797110-16796995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
54-197
               

               
Cow position:
               
chr4:53134666-53134803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
55-197
               

               
Cow position:
               
chr4:46235101-46234958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
57-186
               

               
Cow position:
               
chr4:21232626-21232488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
59-196
               

               
Cow position:
               
chr4:43436330-43436467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
61-187
               

               
Cow position:
               
chr4:6202334-6202209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
62-187
               

               
Cow position:
               
chr4:275515-275639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
67-184
               

               
Cow position:
               
chr4:22701734-22701620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
67-187
               

               
Cow position:
               
chr4:45386897-45387016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
67-204
               

               
Cow position:
               
chr4:10895552-10895421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
68-179
               

               
Cow position:
               
chr4:1184832-1184944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
68-192
               

               
Cow position:
               
chr4:25769361-25769241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
68-224
               

               
Cow position:
               
chr4:45629970-45629809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
74-187
               

               
Cow position:
               
chr4:67467060-67467174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
76-196
               

               
Cow position:
               
chr4:9269815-9269694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               
Show alignments to all cow chromosomes.