Cow genome map
| Conread name: | rche15_o20.y1 |
| Conread position: | 1-160 |
| Cow position: | chr15:7865380-7865222 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 1-160 |
| Cow position: | chr15:16335580-16335739 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-160 |
| Cow position: | chr15:50276190-50276031 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-170 |
| Cow position: | chr15:42240404-42240574 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 93, 160 |
| Conread position: | 1-376 |
| Cow position: | chr15:25432144-25431776 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 161 |
| Conread position: | 2-153 |
| Cow position: | chr15:20550896-20550746 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 2-160 |
| Cow position: | chr15:29929323-29929481 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-288 |
| Cow position: | chr15:38114543-38114830 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 4-315 |
| Cow position: | chr15:53152053-53152359 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 5-160 |
| Cow position: | chr15:695496-695343 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-413 |
| Cow position: | chr15:22909644-22910030 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 114 |
| Conread position: | 5-413 |
| Cow position: | chr15:36847323-36846919 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 6-413 |
| Cow position: | chr15:39919893-39919502 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 74 |
| Conread position: | 11-160 |
| Cow position: | chr15:42639373-42639521 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 14-413 |
| Cow position: | chr15:53159829-53160225 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 184 |
| Conread position: | 15-155 |
| Cow position: | chr15:29907117-29907253 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 164-324 |
| Cow position: | chr15:42241649-42241807 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 168-332 |
| Cow position: | chr15:38863481-38863643 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 176-384 |
| Cow position: | chr15:10316026-10316232 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 177-413 |
| Cow position: | chr15:15209125-15208892 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 128 |
| Conread position: | 280-413 |
| Cow position: | chr15:38115037-38115170 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 318-413 |
| Cow position: | chr15:42241925-42242021 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.