Cow genome map
| Conread name: | rche15_o20.y1 |
| Conread position: | 1-160 |
| Cow position: | chr16:6531722-6531881 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-160 |
| Cow position: | chr16:33694128-33693969 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 2-160 |
| Cow position: | chr16:48940913-48940760 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-415 |
| Cow position: | chr16:45728699-45728292 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 3-413 |
| Cow position: | chr16:49210265-49209865 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 82 |
| Conread position: | 6-146 |
| Cow position: | chr16:33517767-33517627 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-159 |
| Cow position: | chr16:11108121-11107966 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-218 |
| Cow position: | chr16:30687339-30687133 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-413 |
| Cow position: | chr16:9826621-9826245 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 154 |
| Conread position: | 8-413 |
| Cow position: | chr16:35230954-35231344 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 35 |
| Conread position: | 9-160 |
| Cow position: | chr16:4443145-4442991 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 114 |
| Conread position: | 13-394 |
| Cow position: | chr16:49166243-49165855 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 292 |
| Conread position: | 14-231 |
| Cow position: | chr16:10143829-10143606 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 146, 190 |
| Conread position: | 14-413 |
| Cow position: | chr16:47993320-47992937 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 126 |
| Conread position: | 25-161 |
| Cow position: | chr16:9522134-9521998 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-276 |
| Cow position: | chr16:16329599-16329774 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 104-306 |
| Cow position: | chr16:23956820-23957021 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 197, 159 |
| Conread position: | 104-417 |
| Cow position: | chr16:40822925-40822616 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 20 |
| Conread position: | 110-413 |
| Cow position: | chr16:21599277-21598992 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 49 |
| Conread position: | 168-411 |
| Cow position: | chr16:33689358-33689589 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 169-384 |
| Cow position: | chr16:4864017-4864228 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 171, 126 |
| Conread position: | 169-387 |
| Cow position: | chr16:27162261-27162051 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 171, 45 |
| Conread position: | 176-397 |
| Cow position: | chr16:11107919-11107694 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 216-413 |
| Cow position: | chr16:56877892-56878088 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 227-381 |
| Cow position: | chr16:30686980-30686827 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 46 |
| Conread position: | 228-371 |
| Cow position: | chr16:13523945-13523803 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 76 |
| Conread position: | 281-413 |
| Cow position: | chr16:23957016-23957148 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 59, 26 |
Show alignments to all cow chromosomes.