Cow genome map


           Conread name:
           rche15_o20.y1
        

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               134
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-160
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-415
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-413
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 82
               

               Conread position:
               6-146
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-159
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               8-218
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               8-413
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 154
               

               Conread position:
               8-413
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               332, 35
               

               Conread position:
               9-160
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 114
               

               Conread position:
               13-394
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 292
               

               Conread position:
               14-231
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               146, 190
               

               Conread position:
               14-413
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 126
               

               Conread position:
               25-161
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-276
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               104-306
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               197, 159
               

               Conread position:
               104-417
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 20
               

               Conread position:
               110-413
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 49
               

               Conread position:
               168-411
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               169-384
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               171, 126
               

               Conread position:
               169-387
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               171, 45
               

               Conread position:
               176-397
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               216-413
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               227-381
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               113, 46
               

               Conread position:
               228-371
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               111, 76
               

               Conread position:
               281-413
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               59, 26
               
Show alignments to all cow chromosomes.