Cow genome map
| Conread name: | rche15_o20.y1 |
| Conread position: | 1-382 |
| Cow position: | chr3:10152038-10151678 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 113 |
| Conread position: | 1-389 |
| Cow position: | chr3:82265735-82266124 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 25 |
| Conread position: | 2-159 |
| Cow position: | chr3:60019074-60018916 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 2-160 |
| Cow position: | chr3:59560260-59560100 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 135 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 2-395 |
| Cow position: | chr3:47695797-47696190 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 301 |
| Conread position: | 2-435 |
| Cow position: | chr3:84393822-84394255 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 4-200 |
| Cow position: | chr3:42062544-42062736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 5-127 |
| Cow position: | chr3:74540080-74540200 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 5-160 |
| Cow position: | chr3:23086427-23086582 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-160 |
| Cow position: | chr3:71209652-71209498 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 5-382 |
| Cow position: | chr3:34265258-34264889 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 162 |
| Conread position: | 5-403 |
| Cow position: | chr3:33598695-33599093 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 19 |
| Conread position: | 8-160 |
| Cow position: | chr3:8004802-8004651 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 8-413 |
| Cow position: | chr3:2887291-2886910 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 8-422 |
| Cow position: | chr3:27298884-27298487 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 21 |
| Conread position: | 9-158 |
| Cow position: | chr3:39963589-39963738 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-158 |
| Cow position: | chr3:12130263-12130122 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 25-413 |
| Cow position: | chr3:2882230-2881865 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 63 |
| Conread position: | 28-390 |
| Cow position: | chr3:8010841-8010519 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 30-161 |
| Cow position: | chr3:66133622-66133491 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-160 |
| Cow position: | chr3:39155171-39155296 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-413 |
| Cow position: | chr3:74786729-74787089 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 107 |
| Conread position: | 40-160 |
| Cow position: | chr3:83963426-83963306 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 176-369 |
| Cow position: | chr3:29147657-29147471 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 188-413 |
| Cow position: | chr3:81857999-81858223 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 198-413 |
| Cow position: | chr3:6904297-6904513 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 108 |
| Conread position: | 203-390 |
| Cow position: | chr3:8004632-8004444 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 229-414 |
| Cow position: | chr3:42062736-42062922 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 76 |
Show alignments to all cow chromosomes.