Cow genome map
| Conread name: | rche15_o20.y1 |
| Conread position: | 1-160 |
| Cow position: | chr5:46413050-46413208 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 2-160 |
| Cow position: | chr5:43115812-43115657 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-160 |
| Cow position: | chr5:47935583-47935743 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 5-160 |
| Cow position: | chr5:50226270-50226116 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 8-159 |
| Cow position: | chr5:23757908-23758058 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 9-416 |
| Cow position: | chr5:49163690-49163288 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 205 |
| Conread position: | 11-413 |
| Cow position: | chr5:54385172-54385531 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 70 |
| Conread position: | 11-413 |
| Cow position: | chr5:71746844-71747246 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 16-156 |
| Cow position: | chr5:44552251-44552113 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 25-160 |
| Cow position: | chr5:69534875-69535010 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 73-413 |
| Cow position: | chr5:6134404-6134063 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 233 |
| Conread position: | 169-287 |
| Cow position: | chr5:42005055-42004936 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 176-413 |
| Cow position: | chr5:50032322-50032552 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 164, 62 |
| Conread position: | 200-346 |
| Cow position: | chr5:56827905-56827759 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 72, 102 |
| Conread position: | 205-416 |
| Cow position: | chr5:38594675-38594890 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 135, 100 |
| Conread position: | 210-338 |
| Cow position: | chr5:25632840-25632967 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 225-407 |
| Cow position: | chr5:74675314-74675495 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 78 |
Show alignments to all cow chromosomes.