Cow genome map
| Conread name: | rche15_o20.y1 |
| Conread position: | 1-153 |
| Cow position: | chr9:6364385-6364537 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-159 |
| Cow position: | chr9:34887631-34887476 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-370 |
| Cow position: | chr9:40996030-40995680 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 82 |
| Conread position: | 1-407 |
| Cow position: | chr9:9691784-9692195 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 307 |
| Conread position: | 1-413 |
| Cow position: | chr9:42787583-42787995 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 26 |
| Conread position: | 2-159 |
| Cow position: | chr9:48393864-48393706 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-160 |
| Cow position: | chr9:8874398-8874550 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 2-418 |
| Cow position: | chr9:19453308-19452889 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 51 |
| Conread position: | 5-158 |
| Cow position: | chr9:7310795-7310948 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-160 |
| Cow position: | chr9:3879560-3879710 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 93, 29 |
| Conread position: | 5-308 |
| Cow position: | chr9:34408708-34408420 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 71 |
| Conread position: | 5-373 |
| Cow position: | chr9:64613024-64612675 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 209, 77 |
| Conread position: | 5-380 |
| Cow position: | chr9:33225759-33226132 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 19 |
| Conread position: | 5-413 |
| Cow position: | chr9:3040561-3040164 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 5-413 |
| Cow position: | chr9:28258776-28259174 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 6-160 |
| Cow position: | chr9:53498614-53498459 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 6-406 |
| Cow position: | chr9:44974281-44974685 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 18 |
| Conread position: | 8-160 |
| Cow position: | chr9:18155746-18155595 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 9-159 |
| Cow position: | chr9:54499564-54499414 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-413 |
| Cow position: | chr9:58127531-58127940 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 110 |
| Conread position: | 26-158 |
| Cow position: | chr9:56594714-56594582 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 65-410 |
| Cow position: | chr9:63916323-63915994 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 275, 52 |
| Conread position: | 144-413 |
| Cow position: | chr9:42782810-42783079 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 168 |
| Conread position: | 176-384 |
| Cow position: | chr9:48393660-48393459 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 195-395 |
| Cow position: | chr9:1863519-1863311 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 128, 89 |
| Conread position: | 245-410 |
| Cow position: | chr9:18403526-18403363 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 95, 11 |
Show alignments to all cow chromosomes.