Cow genome map
| Conread name: | rche20_m9.y1 |
| Conread position: | 1-316 |
| Cow position: | chr11:35569914-35570219 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 1-318 |
| Cow position: | chr11:21460169-21459850 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 1-330 |
| Cow position: | chr11:18544862-18545191 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 44 |
| Conread position: | 1-330 |
| Cow position: | chr11:18562941-18563269 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 44 |
| Conread position: | 1-443 |
| Cow position: | chr11:66258843-66258407 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 61 |
| Conread position: | 2-319 |
| Cow position: | chr11:73042435-73042129 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 36 |
| Conread position: | 3-336 |
| Cow position: | chr11:18756158-18755836 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 154, 127 |
| Conread position: | 3-352 |
| Cow position: | chr11:82419515-82419176 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 130 |
| Conread position: | 4-320 |
| Cow position: | chr11:63260888-63261203 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 94 |
| Conread position: | 4-321 |
| Cow position: | chr11:12316738-12317065 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 4-321 |
| Cow position: | chr11:40350741-40351056 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 4-321 |
| Cow position: | chr11:56916399-56916717 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 111, 285 |
| Conread position: | 4-323 |
| Cow position: | chr11:84774487-84774167 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 36, 28 |
| Conread position: | 4-335 |
| Cow position: | chr11:52565004-52564671 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 204, 119 |
| Conread position: | 4-336 |
| Cow position: | chr11:11051872-11052202 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 128 |
| Conread position: | 4-354 |
| Cow position: | chr11:71303299-71302954 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 4-368 |
| Cow position: | chr11:18926107-18925745 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 35, 147 |
| Conread position: | 4-388 |
| Cow position: | chr11:52568458-52568857 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 103, 240 |
| Conread position: | 4-397 |
| Cow position: | chr11:61209326-61209702 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 4-419 |
| Cow position: | chr11:20696466-20696070 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 61 |
| Conread position: | 4-450 |
| Cow position: | chr11:28699769-28700187 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 313 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 219, 10 |
| Conread position: | 5-312 |
| Cow position: | chr11:4453027-4453327 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 6-309 |
| Cow position: | chr11:41322456-41322757 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 7-336 |
| Cow position: | chr11:79484830-79485153 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 151, 76 |
| Conread position: | 7-396 |
| Cow position: | chr11:68664316-68663930 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 243 |
| Conread position: | 10-336 |
| Cow position: | chr11:53855844-53855529 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 101, 123 |
| Conread position: | 11-315 |
| Cow position: | chr11:29311591-29311897 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 146, 97 |
| Conread position: | 12-331 |
| Cow position: | chr11:19060757-19061081 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 17-370 |
| Cow position: | chr11:83092358-83092709 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 30-397 |
| Cow position: | chr11:54644609-54644238 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 10, 217 |
| Conread position: | 35-441 |
| Cow position: | chr11:22121616-22122014 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 94, 113 |
| Conread position: | 41-334 |
| Cow position: | chr11:51224906-51224617 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 53-373 |
| Cow position: | chr11:13992808-13992495 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 64, 94 |
| Conread position: | 59-328 |
| Cow position: | chr11:13861427-13861690 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 77-339 |
| Cow position: | chr11:11091708-11091967 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 163, 62 |
| Conread position: | 78-391 |
| Cow position: | chr11:37439180-37438874 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 76 |
| Conread position: | 109-336 |
| Cow position: | chr11:35383832-35384059 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 146-388 |
| Cow position: | chr11:35975479-35975237 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 146-430 |
| Cow position: | chr11:37945568-37945286 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 165 |
Show alignments to all cow chromosomes.