Cow genome map


           Conread name:
           rche20_m9.y1
        

               Conread position:
               1-396
               

               Cow position:
               chr27:16117551-16117944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 57
               

               Conread position:
               3-321
               

               Cow position:
               chr27:27152271-27151958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 97
               

               Conread position:
               4-290
               

               Cow position:
               chr27:19731223-19731505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               151, 128
               

               Conread position:
               4-316
               

               Cow position:
               chr27:12554938-12555241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 100
               

               Conread position:
               4-336
               

               Cow position:
               chr27:17049842-17050171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 144
               

               Conread position:
               5-310
               

               Cow position:
               chr27:18189990-18189684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 129
               

               Conread position:
               5-337
               

               Cow position:
               chr27:12114871-12115193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 37
               

               Conread position:
               135-312
               

               Cow position:
               chr27:21261482-21261658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 123
               
Show alignments to all cow chromosomes.