Cow genome map
| Conread name: | rche20_m9.y1 |
| Conread position: | 1-388 |
| Cow position: | chr4:13145387-13144995 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 2-326 |
| Cow position: | chr4:65344924-65345227 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 155, 39 |
| Conread position: | 3-321 |
| Cow position: | chr4:59974044-59973729 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 9, 56 |
| Conread position: | 3-332 |
| Cow position: | chr4:2599065-2599392 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 4-285 |
| Cow position: | chr4:3956098-3955809 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 4-314 |
| Cow position: | chr4:22464867-22465180 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 96, 247 |
| Conread position: | 4-315 |
| Cow position: | chr4:45918221-45917911 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 113, 130 |
| Conread position: | 4-316 |
| Cow position: | chr4:49907383-49907073 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 87 |
| Conread position: | 4-321 |
| Cow position: | chr4:19237410-19237092 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 4-322 |
| Cow position: | chr4:8649420-8649097 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 101 |
| Conread position: | 4-322 |
| Cow position: | chr4:25596142-25596462 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 4-323 |
| Cow position: | chr4:4185511-4185200 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 156, 121 |
| Conread position: | 4-336 |
| Cow position: | chr4:44595895-44595574 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 110, 47 |
| Conread position: | 4-337 |
| Cow position: | chr4:17583371-17583712 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 4-387 |
| Cow position: | chr4:51980493-51980114 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 4-396 |
| Cow position: | chr4:13588396-13588775 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 4-397 |
| Cow position: | chr4:49828560-49828183 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 10 |
| Conread position: | 4-414 |
| Cow position: | chr4:42960999-42960613 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 156, 44 |
| Conread position: | 5-331 |
| Cow position: | chr4:29134396-29134708 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 112, 95 |
| Conread position: | 5-336 |
| Cow position: | chr4:23380678-23381019 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 5-338 |
| Cow position: | chr4:43855749-43856084 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 6-316 |
| Cow position: | chr4:1751209-1751507 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 108, 43 |
| Conread position: | 6-323 |
| Cow position: | chr4:60719007-60718699 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 104, 60 |
| Conread position: | 6-395 |
| Cow position: | chr4:45303139-45303512 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 9-321 |
| Cow position: | chr4:55670579-55670269 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 104, 194 |
| Conread position: | 9-336 |
| Cow position: | chr4:61080598-61080265 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 308 |
| Conread position: | 11-316 |
| Cow position: | chr4:6612847-6613147 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 41-316 |
| Cow position: | chr4:50604461-50604200 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 48-335 |
| Cow position: | chr4:44082260-44081978 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 164-397 |
| Cow position: | chr4:28694784-28695020 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 22 |
Show alignments to all cow chromosomes.