Cow genome map
| Conread name: | rche20_m9.y1 |
| Conread position: | 4-320 |
| Cow position: | chr5:3970966-3970648 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 113, 202 |
| Conread position: | 4-320 |
| Cow position: | chr5:6576145-6576466 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 211 |
| Conread position: | 4-322 |
| Cow position: | chr5:25913162-25912841 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 4-330 |
| Cow position: | chr5:52228923-52229236 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 153, 68 |
| Conread position: | 4-335 |
| Cow position: | chr5:72541356-72541043 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 5-316 |
| Cow position: | chr5:37715178-37715493 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 235 |
| Conread position: | 5-397 |
| Cow position: | chr5:19211335-19211712 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 152, 58 |
| Conread position: | 5-397 |
| Cow position: | chr5:40262040-40262423 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 215, 102 |
| Conread position: | 7-316 |
| Cow position: | chr5:26568140-26568441 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 7-397 |
| Cow position: | chr5:67618742-67618351 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 116 |
| Conread position: | 9-312 |
| Cow position: | chr5:4350740-4351040 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 9-396 |
| Cow position: | chr5:41739080-41738716 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 9-439 |
| Cow position: | chr5:29275523-29275942 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 105, 125 |
| Conread position: | 10-320 |
| Cow position: | chr5:15760929-15761246 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 24, 231 |
| Conread position: | 10-419 |
| Cow position: | chr5:54170206-54169801 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 105, 74 |
| Conread position: | 16-414 |
| Cow position: | chr5:14186201-14186598 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 48 |
| Conread position: | 22-316 |
| Cow position: | chr5:61802790-61803070 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 35-250 |
| Cow position: | chr5:25253811-25253598 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 38-419 |
| Cow position: | chr5:53148862-53149243 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 52-328 |
| Cow position: | chr5:37459737-37459460 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 82 |
| Conread position: | 56-336 |
| Cow position: | chr5:74778445-74778725 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 81-397 |
| Cow position: | chr5:18465901-18465590 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 95 |
Show alignments to all cow chromosomes.