Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-461 |
| Cow position: | chr10:41876643-41877111 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 58 |
| Conread position: | 1-464 |
| Cow position: | chr10:21741023-21740557 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr10:32578029-32578484 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr10:39179498-39179978 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 2-204 |
| Cow position: | chr10:49310257-49310466 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 3-464 |
| Cow position: | chr10:11685939-11685476 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 7-464 |
| Cow position: | chr10:41566847-41567298 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 12-464 |
| Cow position: | chr10:62778082-62778542 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 33 |
| Conread position: | 17-464 |
| Cow position: | chr10:14803574-14804031 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 24-464 |
| Cow position: | chr10:39817603-39817168 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 25-451 |
| Cow position: | chr10:57559805-57559366 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 25-464 |
| Cow position: | chr10:21400925-21400476 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 94 |
| Conread position: | 25-464 |
| Cow position: | chr10:54059604-54059161 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 27-464 |
| Cow position: | chr10:10478391-10477946 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 28-266 |
| Cow position: | chr10:61297081-61297319 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 106, 88 |
| Conread position: | 28-464 |
| Cow position: | chr10:1375289-1375726 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 30-175 |
| Cow position: | chr10:50018305-50018159 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 33-462 |
| Cow position: | chr10:38546467-38546032 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 33-464 |
| Cow position: | chr10:25498111-25498547 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 33-464 |
| Cow position: | chr10:38847130-38847553 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 20 |
| Conread position: | 34-464 |
| Cow position: | chr10:3543824-3543388 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 34-464 |
| Cow position: | chr10:19496519-19496091 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 35-274 |
| Cow position: | chr10:55092868-55093111 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 90, 83 |
| Conread position: | 35-464 |
| Cow position: | chr10:276350-276784 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 37-464 |
| Cow position: | chr10:29696004-29696430 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 25 |
| Conread position: | 38-461 |
| Cow position: | chr10:60489426-60489841 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 38-464 |
| Cow position: | chr10:280858-280426 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 38-464 |
| Cow position: | chr10:4192451-4192038 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 38-464 |
| Cow position: | chr10:29633097-29632668 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 38-464 |
| Cow position: | chr10:47906542-47906973 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 38-464 |
| Cow position: | chr10:51952840-51952423 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 38-464 |
| Cow position: | chr10:62216369-62216801 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 39-454 |
| Cow position: | chr10:42663992-42664380 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 291 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 171, 20 |
| Conread position: | 40-321 |
| Cow position: | chr10:42628431-42628706 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 184, 77 |
| Conread position: | 40-464 |
| Cow position: | chr10:32650495-32650928 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 78 |
| Conread position: | 40-465 |
| Cow position: | chr10:24299090-24298658 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 41-463 |
| Cow position: | chr10:14859741-14860160 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 76 |
| Conread position: | 43-415 |
| Cow position: | chr10:19839919-19840293 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 36 |
| Conread position: | 43-464 |
| Cow position: | chr10:25565480-25565063 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 75 |
| Conread position: | 43-464 |
| Cow position: | chr10:34685663-34686088 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 43-464 |
| Cow position: | chr10:41389787-41389348 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 90, 38 |
| Conread position: | 53-464 |
| Cow position: | chr10:41351978-41351565 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 55-463 |
| Cow position: | chr10:38538718-38538303 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 65 |
| Conread position: | 59-308 |
| Cow position: | chr10:31523621-31523859 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 164, 58 |
| Conread position: | 78-341 |
| Cow position: | chr10:8665310-8665047 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 80-321 |
| Cow position: | chr10:13366050-13365801 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 88-464 |
| Cow position: | chr10:46191185-46191553 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 118-352 |
| Cow position: | chr10:65307963-65308201 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 132-421 |
| Cow position: | chr10:39904783-39905072 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 178 |
| Conread position: | 153-464 |
| Cow position: | chr10:39854136-39853819 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 154 |
| Conread position: | 184-464 |
| Cow position: | chr10:46694466-46694181 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 273-464 |
| Cow position: | chr10:55093241-55093436 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 112, 37 |
Show alignments to all cow chromosomes.