Cow genome map

Conread name: rche24_n1.y1

Conread position: 1-460
Cow position:
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 8

Conread position: 1-464
Cow position:
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 127

Conread position: 1-464
Cow position:
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 1-464
Cow position:
Alignm length: 472
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 7

Conread position: 3-464
Cow position:
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 10

Conread position: 7-460
Cow position:
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 16

Conread position: 7-464
Cow position:
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 16

Conread position: 12-464
Cow position:
Alignm length: 467
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 7

Conread position: 17-193
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 36

Conread position: 18-316
Cow position:
Alignm length: 304
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 125, 37

Conread position: 22-253
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 37

Conread position: 25-464
Cow position:
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 34

Conread position: 27-187
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 28-464
Cow position:
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 90

Conread position: 29-464
Cow position:
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 30-464
Cow position:
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 15

Conread position: 31-461
Cow position:
Alignm length: 447
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 39

Conread position: 31-464
Cow position:
Alignm length: 446
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 28

Conread position: 33-464
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 22

Conread position: 37-452
Cow position:
Alignm length: 427
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 22

Conread position: 37-462
Cow position:
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 22

Conread position: 38-314
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 104, 76

Conread position: 38-418
Cow position:
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 13

Conread position: 38-432
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 13

Conread position: 38-462
Cow position:
Alignm length: 436
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 38-464
Cow position:
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 38-464
Cow position:
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 21

Conread position: 38-464
Cow position:
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 13

Conread position: 38-464
Cow position:
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 13

Conread position: 38-464
Cow position:
Alignm length: 437
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 39-458
Cow position:
Alignm length: 426
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 12

Conread position: 39-464
Cow position:
Alignm length: 437
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 20

Conread position: 40-411
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 22

Conread position: 41-308
Cow position:
Alignm length: 272
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 26

Conread position: 42-275
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 78

Conread position: 42-309
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 181, 9

Conread position: 42-464
Cow position:
Alignm length: 430
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 43-373
Cow position:
Alignm length: 336
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 76

Conread position: 43-448
Cow position:
Alignm length: 408
Alignm identity: 256
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 208, 59

Conread position: 43-464
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 8

Conread position: 44-432
Cow position:
Alignm length: 393
Alignm identity: 254
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 109, 75

Conread position: 45-464
Cow position:
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 14

Conread position: 46-464
Cow position:
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 48-464
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 53-432
Cow position:
Alignm length: 386
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 59-287
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 59-366
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 59

Conread position: 59-464
Cow position:
Alignm length: 417
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 59

Conread position: 59-464
Cow position:
Alignm length: 414
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 59

Conread position: 77-432
Cow position:
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 40

Conread position: 77-464
Cow position:
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 40

Conread position: 88-464
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 30

Conread position: 132-432
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 107

Conread position: 144-464
Cow position:
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 93

Conread position: 172-465
Cow position:
Alignm length: 301
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 65

Conread position: 196-464
Cow position:
Alignm length: 277
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 103

Conread position: 204-366
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 84

Conread position: 222-449
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 206, 60

Conread position: 225-464
Cow position:
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 81

Conread position: 258-463
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 176, 52

Conread position: 299-464
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 0

Conread position: 346-464
Cow position:
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 0

Show alignments to all cow chromosomes.