Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-464 |
| Cow position: | chr13:4872509-4872976 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr13:30245297-30244834 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 3-464 |
| Cow position: | chr13:30657525-30657075 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 10 |
| Conread position: | 7-464 |
| Cow position: | chr13:21840753-21840295 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 16 |
| Conread position: | 11-464 |
| Cow position: | chr13:13324199-13324648 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 17-463 |
| Cow position: | chr13:50108909-50109360 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 18-415 |
| Cow position: | chr13:2232103-2232504 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 24-464 |
| Cow position: | chr13:33825276-33824832 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 38 |
| Conread position: | 25-404 |
| Cow position: | chr13:34868218-34868606 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 96 |
| Conread position: | 25-464 |
| Cow position: | chr13:17307931-17308374 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 28-432 |
| Cow position: | chr13:30302529-30302925 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 28-463 |
| Cow position: | chr13:4940543-4940986 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 28-464 |
| Cow position: | chr13:15924926-15924485 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 30-464 |
| Cow position: | chr13:34911907-34911479 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 30-464 |
| Cow position: | chr13:54284048-54284468 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 31-415 |
| Cow position: | chr13:20542903-20542529 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 32-464 |
| Cow position: | chr13:31832068-31832499 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 19 |
| Conread position: | 35-464 |
| Cow position: | chr13:3276620-3277053 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 36-464 |
| Cow position: | chr13:2908980-2908551 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 15 |
| Conread position: | 36-464 |
| Cow position: | chr13:34187224-34186786 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 37-464 |
| Cow position: | chr13:3654848-3654426 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 38-253 |
| Cow position: | chr13:13046354-13046141 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 38-281 |
| Cow position: | chr13:3058527-3058281 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 38-462 |
| Cow position: | chr13:32986580-32986159 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-462 |
| Cow position: | chr13:34326210-34325778 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 38-464 |
| Cow position: | chr13:2297331-2296899 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 46 |
| Conread position: | 38-464 |
| Cow position: | chr13:32738353-32737923 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 38-464 |
| Cow position: | chr13:34143192-34142760 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 80 |
| Conread position: | 38-464 |
| Cow position: | chr13:34692629-34693062 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 43-458 |
| Cow position: | chr13:31734611-31734188 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 75 |
| Conread position: | 45-349 |
| Cow position: | chr13:30237644-30237945 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 46-464 |
| Cow position: | chr13:33928085-33927671 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 16 |
| Conread position: | 55-305 |
| Cow position: | chr13:47859935-47860183 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 168, 60 |
| Conread position: | 56-464 |
| Cow position: | chr13:34936619-34937046 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 59-462 |
| Cow position: | chr13:62328096-62327687 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 106-464 |
| Cow position: | chr13:1559559-1559908 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 120, 11 |
| Conread position: | 109-464 |
| Cow position: | chr13:49973217-49973583 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 190 |
| Conread position: | 115-463 |
| Cow position: | chr13:56730738-56730388 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 272-462 |
| Cow position: | chr13:10114949-10114756 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 75, 38 |
| Conread position: | 336-464 |
| Cow position: | chr13:4178886-4178752 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.