Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-464 |
| Cow position: | chr14:35387825-35387374 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 1-464 |
| Cow position: | chr14:45672737-45672269 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 16 |
| Conread position: | 11-464 |
| Cow position: | chr14:17492144-17491681 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 11-464 |
| Cow position: | chr14:27992976-27992533 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 12-433 |
| Cow position: | chr14:31607600-31607191 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 39 |
| Conread position: | 12-464 |
| Cow position: | chr14:14309750-14309300 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 12-464 |
| Cow position: | chr14:33394464-33394001 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 13-464 |
| Cow position: | chr14:23256678-23257134 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 38 |
| Conread position: | 13-464 |
| Cow position: | chr14:45833479-45833929 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 106 |
| Conread position: | 14-461 |
| Cow position: | chr14:22018724-22019165 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 25-464 |
| Cow position: | chr14:749898-750345 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 26-464 |
| Cow position: | chr14:45916732-45917193 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 27-464 |
| Cow position: | chr14:13660656-13660213 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 27-464 |
| Cow position: | chr14:23690891-23690454 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 28-464 |
| Cow position: | chr14:13272596-13273027 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 28-464 |
| Cow position: | chr14:37223235-37223677 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 30-461 |
| Cow position: | chr14:38532965-38532520 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 30-464 |
| Cow position: | chr14:44225749-44226172 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 31-321 |
| Cow position: | chr14:45160199-45160495 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 31-427 |
| Cow position: | chr14:23529663-23529291 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 184, 19 |
| Conread position: | 31-464 |
| Cow position: | chr14:35928517-35928954 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 47 |
| Conread position: | 33-464 |
| Cow position: | chr14:45850564-45850997 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 84 |
| Conread position: | 34-464 |
| Cow position: | chr14:16273957-16273520 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 34-464 |
| Cow position: | chr14:45712642-45712211 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 35-463 |
| Cow position: | chr14:7831200-7830766 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 36-464 |
| Cow position: | chr14:40339050-40339458 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 38-178 |
| Cow position: | chr14:41085465-41085328 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 38-451 |
| Cow position: | chr14:11467941-11468348 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-454 |
| Cow position: | chr14:44856083-44855661 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 38-462 |
| Cow position: | chr14:44130269-44130688 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 21 |
| Conread position: | 38-462 |
| Cow position: | chr14:44421900-44422327 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 38-464 |
| Cow position: | chr14:9044907-9045341 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr14:29048558-29048128 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 38-464 |
| Cow position: | chr14:30597026-30596609 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 21 |
| Conread position: | 38-464 |
| Cow position: | chr14:36967600-36968030 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 80 |
| Conread position: | 39-450 |
| Cow position: | chr14:43552763-43553178 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 39-463 |
| Cow position: | chr14:43034533-43034113 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 106, 20 |
| Conread position: | 41-381 |
| Cow position: | chr14:44580286-44580606 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 183, 76 |
| Conread position: | 43-465 |
| Cow position: | chr14:47623917-47624336 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 44-452 |
| Cow position: | chr14:45205422-45205841 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 45-464 |
| Cow position: | chr14:45767354-45767777 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 67-432 |
| Cow position: | chr14:47589243-47589606 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 67-464 |
| Cow position: | chr14:42151694-42152098 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 52 |
| Conread position: | 81-464 |
| Cow position: | chr14:45303976-45303589 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 103-465 |
| Cow position: | chr14:45029707-45029347 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 118-464 |
| Cow position: | chr14:23901381-23901025 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 181 |
| Conread position: | 131-464 |
| Cow position: | chr14:50134508-50134845 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 132-464 |
| Cow position: | chr14:2283776-2284114 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 132-464 |
| Cow position: | chr14:46464509-46464848 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 11 |
| Conread position: | 138-307 |
| Cow position: | chr14:1500476-1500643 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 249-463 |
| Cow position: | chr14:13480172-13479960 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 185, 60 |
Show alignments to all cow chromosomes.