Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-313 |
| Cow position: | chr17:11782908-11783222 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 1-461 |
| Cow position: | chr17:22160453-22160921 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr17:1383274-1382807 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr17:6089624-6089154 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 1-464 |
| Cow position: | chr17:24633494-24633961 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 3-464 |
| Cow position: | chr17:15157420-15156957 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 11-376 |
| Cow position: | chr17:28109634-28110001 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 12-464 |
| Cow position: | chr17:43988086-43988540 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 47 |
| Conread position: | 17-464 |
| Cow position: | chr17:8208661-8209113 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 24-464 |
| Cow position: | chr17:23857473-23857027 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 42 |
| Conread position: | 25-451 |
| Cow position: | chr17:249482-249927 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 317 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 25-464 |
| Cow position: | chr17:228743-228301 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 25-464 |
| Cow position: | chr17:2173435-2173885 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 25-464 |
| Cow position: | chr17:2261670-2262113 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 28-451 |
| Cow position: | chr17:1879656-1880085 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 31 |
| Conread position: | 30-464 |
| Cow position: | chr17:14325929-14325495 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 32-321 |
| Cow position: | chr17:39933261-39933538 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 35-464 |
| Cow position: | chr17:15849970-15850403 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 37-465 |
| Cow position: | chr17:4081225-4081640 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 38-187 |
| Cow position: | chr17:32024622-32024472 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 21 |
| Conread position: | 38-300 |
| Cow position: | chr17:2737952-2738216 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 38-365 |
| Cow position: | chr17:15370653-15370974 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 38-460 |
| Cow position: | chr17:14217451-14217020 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 38-464 |
| Cow position: | chr17:6002439-6002010 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 38-464 |
| Cow position: | chr17:9653876-9653449 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 21 |
| Conread position: | 38-464 |
| Cow position: | chr17:18104107-18103673 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr17:20666153-20665719 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 38-464 |
| Cow position: | chr17:24780621-24781055 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr17:27345381-27345806 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 38-465 |
| Cow position: | chr17:2249008-2248576 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-465 |
| Cow position: | chr17:22429908-22429485 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 40-464 |
| Cow position: | chr17:42264102-42264510 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 321, 11 |
| Conread position: | 43-247 |
| Cow position: | chr17:1284179-1283972 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 106, 8 |
| Conread position: | 43-458 |
| Cow position: | chr17:4294955-4295351 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 74 |
| Conread position: | 44-454 |
| Cow position: | chr17:16889707-16890116 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 45-464 |
| Cow position: | chr17:15435367-15435798 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 46-464 |
| Cow position: | chr17:44853346-44852925 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 48-464 |
| Cow position: | chr17:35591797-35592220 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 59-464 |
| Cow position: | chr17:20183633-20183224 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 63-432 |
| Cow position: | chr17:1658960-1658606 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 77-464 |
| Cow position: | chr17:18185913-18185525 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 93-463 |
| Cow position: | chr17:15143736-15143361 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 25 |
| Conread position: | 137-461 |
| Cow position: | chr17:20088055-20087740 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 6 |
| Conread position: | 137-464 |
| Cow position: | chr17:22131909-22132237 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 140-464 |
| Cow position: | chr17:2287066-2287393 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 196-464 |
| Cow position: | chr17:18027024-18026750 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 111 |
Show alignments to all cow chromosomes.