Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-274 |
| Cow position: | chr19:52152521-52152237 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 1-464 |
| Cow position: | chr19:32244429-32244903 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 8-464 |
| Cow position: | chr19:37651-38114 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 12-464 |
| Cow position: | chr19:43143479-43143935 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 50 |
| Conread position: | 13-463 |
| Cow position: | chr19:170979-170529 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 40 |
| Conread position: | 14-464 |
| Cow position: | chr19:359746-359290 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 297 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 108 |
| Conread position: | 18-356 |
| Cow position: | chr19:561730-561403 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 131, 33 |
| Conread position: | 18-459 |
| Cow position: | chr19:32223661-32223233 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 13 |
| Conread position: | 18-464 |
| Cow position: | chr19:772359-772818 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 18-464 |
| Cow position: | chr19:15953626-15954067 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 22-464 |
| Cow position: | chr19:416422-416880 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 23 |
| Conread position: | 24-464 |
| Cow position: | chr19:30372056-30372493 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 25-464 |
| Cow position: | chr19:28593045-28593496 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 25-464 |
| Cow position: | chr19:32212295-32211854 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 26 |
| Conread position: | 27-254 |
| Cow position: | chr19:378100-377871 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 27-415 |
| Cow position: | chr19:20111446-20111072 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 28-463 |
| Cow position: | chr19:33941388-33941828 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 29-413 |
| Cow position: | chr19:29209343-29209721 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 33-464 |
| Cow position: | chr19:261219-261663 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 36-396 |
| Cow position: | chr19:439863-439498 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 38-263 |
| Cow position: | chr19:35376340-35376572 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 38-319 |
| Cow position: | chr19:4252572-4252291 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 38-322 |
| Cow position: | chr19:1031894-1032170 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 103, 24 |
| Conread position: | 38-377 |
| Cow position: | chr19:32193361-32193704 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 38-464 |
| Cow position: | chr19:7341857-7342287 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 38-464 |
| Cow position: | chr19:32665318-32665749 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 38-464 |
| Cow position: | chr19:39688330-39688748 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 21 |
| Conread position: | 39-462 |
| Cow position: | chr19:35979055-35979482 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 39-464 |
| Cow position: | chr19:76448-76050 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 40-432 |
| Cow position: | chr19:39546416-39546808 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 11 |
| Conread position: | 40-464 |
| Cow position: | chr19:34211-34635 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 45-380 |
| Cow position: | chr19:4532948-4532625 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 46-465 |
| Cow position: | chr19:40887858-40887431 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 79 |
| Conread position: | 48-402 |
| Cow position: | chr19:31341505-31341859 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 72-397 |
| Cow position: | chr19:27052945-27052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 46 |
| Conread position: | 95-377 |
| Cow position: | chr19:28376372-28376644 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 109-463 |
| Cow position: | chr19:42248670-42249022 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 134-464 |
| Cow position: | chr19:33873311-33873645 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 147-463 |
| Cow position: | chr19:350387-350073 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 156-464 |
| Cow position: | chr19:6553518-6553821 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 196-464 |
| Cow position: | chr19:32237735-32237463 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 305-464 |
| Cow position: | chr19:1032131-1032294 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 129, 43 |
Show alignments to all cow chromosomes.