Cow genome map

Conread name: rche24_n1.y1

Conread position: 1-377
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-464
Cow position:
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-464
Cow position:
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-464
Cow position:
Alignm length: 477
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 3-464
Cow position:
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 3-464
Cow position:
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 8-464
Cow position:
Alignm length: 469
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 9-464
Cow position:
Alignm length: 460
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 46

Conread position: 12-465
Cow position:
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 33

Conread position: 13-464
Cow position:
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 32

Conread position: 13-464
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 211, 32

Conread position: 17-432
Cow position:
Alignm length: 421
Alignm identity: 284
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 43

Conread position: 17-464
Cow position:
Alignm length: 459
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 37

Conread position: 22-458
Cow position:
Alignm length: 448
Alignm identity: 296
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 96, 33

Conread position: 25-248
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 122, 26

Conread position: 25-459
Cow position:
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 26

Conread position: 25-460
Cow position:
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 26

Conread position: 25-464
Cow position:
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 296

Conread position: 25-464
Cow position:
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 26

Conread position: 25-464
Cow position:
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 95

Conread position: 28-264
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 31

Conread position: 28-321
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 30-454
Cow position:
Alignm length: 434
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 30-464
Cow position:
Alignm length: 444
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 30

Conread position: 32-341
Cow position:
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 19

Conread position: 32-464
Cow position:
Alignm length: 446
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 19

Conread position: 32-464
Cow position:
Alignm length: 445
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 28

Conread position: 33-367
Cow position:
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 84

Conread position: 33-462
Cow position:
Alignm length: 439
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 84

Conread position: 34-463
Cow position:
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 43

Conread position: 35-378
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 16

Conread position: 35-464
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 16

Conread position: 35-464
Cow position:
Alignm length: 445
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 114, 27

Conread position: 36-270
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 23

Conread position: 36-379
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 187, 23

Conread position: 36-461
Cow position:
Alignm length: 439
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 23

Conread position: 37-370
Cow position:
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 16

Conread position: 37-464
Cow position:
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 16

Conread position: 37-464
Cow position:
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 37-464
Cow position:
Alignm length: 435
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 22

Conread position: 38-258
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 21

Conread position: 38-269
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 38-377
Cow position:
Alignm length: 343
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 80

Conread position: 38-399
Cow position:
Alignm length: 369
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 38-424
Cow position:
Alignm length: 397
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 16

Conread position: 38-430
Cow position:
Alignm length: 396
Alignm identity: 255
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 184, 24

Conread position: 38-464
Cow position:
Alignm length: 441
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 21

Conread position: 38-464
Cow position:
Alignm length: 443
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 25

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 21

Conread position: 38-464
Cow position:
Alignm length: 439
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 38-464
Cow position:
Alignm length: 440
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 79

Conread position: 38-464
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 13

Conread position: 38-464
Cow position:
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 21

Conread position: 38-464
Cow position:
Alignm length: 439
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 13

Conread position: 38-464
Cow position:
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 13

Conread position: 38-464
Cow position:
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 13

Conread position: 38-464
Cow position:
Alignm length: 436
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 13

Conread position: 38-464
Cow position:
Alignm length: 434
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 13

Conread position: 39-464
Cow position:
Alignm length: 434
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 12

Conread position: 40-275
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 11

Conread position: 40-419
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 40-432
Cow position:
Alignm length: 399
Alignm identity: 265
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 112, 11

Conread position: 40-459
Cow position:
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 77

Conread position: 40-464
Cow position:
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 11

Conread position: 40-464
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 40-464
Cow position:
Alignm length: 441
Alignm identity: 294
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 77

Conread position: 41-464
Cow position:
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 41-464
Cow position:
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 42-432
Cow position:
Alignm length: 397
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 77

Conread position: 43-415
Cow position:
Alignm length: 379
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 12

Conread position: 43-421
Cow position:
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 43-459
Cow position:
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 43-464
Cow position:
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 13

Conread position: 43-464
Cow position:
Alignm length: 430
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 75

Conread position: 45-464
Cow position:
Alignm length: 430
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 15

Conread position: 46-424
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 13

Conread position: 46-463
Cow position:
Alignm length: 424
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 13

Conread position: 46-464
Cow position:
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 19

Conread position: 48-273
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 176, 11

Conread position: 53-464
Cow position:
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 66

Conread position: 62-464
Cow position:
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 56

Conread position: 66-464
Cow position:
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 52

Conread position: 89-464
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 90-464
Cow position:
Alignm length: 382
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 27

Conread position: 116-402
Cow position:
Alignm length: 292
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 117-432
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 42, 25

Conread position: 117-463
Cow position:
Alignm length: 355
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 29

Conread position: 131-464
Cow position:
Alignm length: 340
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 66

Conread position: 132-464
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 176

Conread position: 141-463
Cow position:
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 166

Conread position: 176-464
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 47, 116

Conread position: 227-464
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 9

Conread position: 237-464
Cow position:
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 62

Conread position: 306-464
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.