Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-259 |
| Cow position: | chr21:28529717-28529459 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-375 |
| Cow position: | chr21:27708587-27708963 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-411 |
| Cow position: | chr21:26819188-26818785 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 16 |
| Conread position: | 1-464 |
| Cow position: | chr21:33755125-33755596 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 2-464 |
| Cow position: | chr21:39424889-39425358 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 22-464 |
| Cow position: | chr21:11453810-11453361 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 24-464 |
| Cow position: | chr21:4090495-4090944 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 25-464 |
| Cow position: | chr21:26638615-26638170 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 25-464 |
| Cow position: | chr21:37044760-37045205 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 25-464 |
| Cow position: | chr21:46915433-46915883 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 25-464 |
| Cow position: | chr21:47947957-47948404 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 27-464 |
| Cow position: | chr21:13124146-13123711 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 90 |
| Conread position: | 28-464 |
| Cow position: | chr21:30561654-30562097 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 31-419 |
| Cow position: | chr21:358870-359260 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 34-464 |
| Cow position: | chr21:2530271-2529832 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 35-464 |
| Cow position: | chr21:3426345-3426780 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 36-463 |
| Cow position: | chr21:4222829-4222394 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 81 |
| Conread position: | 38-306 |
| Cow position: | chr21:17572785-17573053 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 38-415 |
| Cow position: | chr21:3615155-3615533 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 38-451 |
| Cow position: | chr21:9891472-9891874 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 13 |
| Conread position: | 38-464 |
| Cow position: | chr21:2476649-2476232 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 38-464 |
| Cow position: | chr21:2510516-2510946 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-464 |
| Cow position: | chr21:12056136-12055706 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 38-464 |
| Cow position: | chr21:34292880-34293311 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 39-460 |
| Cow position: | chr21:11505449-11505878 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 39-464 |
| Cow position: | chr21:4183399-4183815 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 77 |
| Conread position: | 39-464 |
| Cow position: | chr21:7267675-7267249 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 79 |
| Conread position: | 40-462 |
| Cow position: | chr21:1292311-1291898 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 41-464 |
| Cow position: | chr21:2541552-2541117 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 78 |
| Conread position: | 43-430 |
| Cow position: | chr21:34259346-34258975 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 43-461 |
| Cow position: | chr21:2416106-2416520 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 8 |
| Conread position: | 43-464 |
| Cow position: | chr21:2769597-2769166 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 44-464 |
| Cow position: | chr21:4076714-4077134 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 45-282 |
| Cow position: | chr21:27624-27851 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 45-464 |
| Cow position: | chr21:20744882-20744470 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 46-464 |
| Cow position: | chr21:47939347-47939771 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 48-432 |
| Cow position: | chr21:2716808-2716425 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 48-461 |
| Cow position: | chr21:35596242-35596660 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 53-464 |
| Cow position: | chr21:23811764-23812170 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 35 |
| Conread position: | 56-464 |
| Cow position: | chr21:2789112-2788697 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 37 |
| Conread position: | 77-462 |
| Cow position: | chr21:4456729-4457119 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 134-462 |
| Cow position: | chr21:4590030-4589698 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 160-463 |
| Cow position: | chr21:27282372-27282679 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 151 |
| Conread position: | 171-464 |
| Cow position: | chr21:6339562-6339861 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 171-464 |
| Cow position: | chr21:8678364-8678065 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 124 |
| Conread position: | 274-464 |
| Cow position: | chr21:3798271-3798076 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 160, 35 |
Show alignments to all cow chromosomes.