Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-255 |
| Cow position: | chr22:4065293-4065549 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-389 |
| Cow position: | chr22:6984907-6985296 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr22:5933329-5932874 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 117 |
| Conread position: | 1-464 |
| Cow position: | chr22:10546303-10546767 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr22:44353288-44352835 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 3-464 |
| Cow position: | chr22:44369966-44369502 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 10-464 |
| Cow position: | chr22:32348308-32347860 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 12-452 |
| Cow position: | chr22:37265118-37265565 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 41 |
| Conread position: | 17-462 |
| Cow position: | chr22:34598347-34598787 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 7 |
| Conread position: | 24-460 |
| Cow position: | chr22:3278681-3278236 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 24-464 |
| Cow position: | chr22:5233628-5233183 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 25-464 |
| Cow position: | chr22:693308-693748 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 26 |
| Conread position: | 28-464 |
| Cow position: | chr22:21589012-21589446 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 31 |
| Conread position: | 30-436 |
| Cow position: | chr22:5672418-5672825 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 30-464 |
| Cow position: | chr22:46636016-46635592 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 31-464 |
| Cow position: | chr22:7277204-7277643 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 32-464 |
| Cow position: | chr22:37131334-37131766 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 34-385 |
| Cow position: | chr22:1285248-1284896 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 34-388 |
| Cow position: | chr22:302296-301947 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 35-292 |
| Cow position: | chr22:35943707-35943454 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 24 |
| Conread position: | 35-464 |
| Cow position: | chr22:46853038-46853465 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 36-464 |
| Cow position: | chr22:8136512-8136082 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 37-464 |
| Cow position: | chr22:33350856-33351290 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 38-185 |
| Cow position: | chr22:36534276-36534126 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 76 |
| Conread position: | 38-215 |
| Cow position: | chr22:37067223-37067047 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 38-277 |
| Cow position: | chr22:18476074-18475836 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-307 |
| Cow position: | chr22:37073479-37073230 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 38-458 |
| Cow position: | chr22:327460-327048 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 38-459 |
| Cow position: | chr22:44489579-44490004 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 38-460 |
| Cow position: | chr22:27310088-27309655 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 38-463 |
| Cow position: | chr22:32485644-32485231 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:1319084-1319519 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:1321304-1321717 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:1878482-1878915 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:24949518-24949952 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:39882484-39882054 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 38-464 |
| Cow position: | chr22:41419996-41419572 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 78 |
| Conread position: | 39-455 |
| Cow position: | chr22:1293809-1293388 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 40-464 |
| Cow position: | chr22:158219-157785 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 40-464 |
| Cow position: | chr22:36736457-36736880 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 41-462 |
| Cow position: | chr22:36861839-36861410 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 41-464 |
| Cow position: | chr22:5307809-5308226 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 10 |
| Conread position: | 41-464 |
| Cow position: | chr22:35672664-35672234 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 10 |
| Conread position: | 45-463 |
| Cow position: | chr22:36267073-36267481 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 46-321 |
| Cow position: | chr22:118120-117837 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 71 |
| Conread position: | 46-464 |
| Cow position: | chr22:15851039-15851451 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 13 |
| Conread position: | 48-464 |
| Cow position: | chr22:3307030-3306622 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 70 |
| Conread position: | 48-464 |
| Cow position: | chr22:6503973-6503555 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 66 |
| Conread position: | 51-464 |
| Cow position: | chr22:11030662-11031082 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 56-462 |
| Cow position: | chr22:44609322-44609716 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 9 |
| Conread position: | 62-306 |
| Cow position: | chr22:309426-309674 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 77-464 |
| Cow position: | chr22:27283776-27284153 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 14 |
| Conread position: | 123-463 |
| Cow position: | chr22:13917278-13917624 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 184 |
| Conread position: | 132-431 |
| Cow position: | chr22:12732061-12731768 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 132-463 |
| Cow position: | chr22:36274592-36274931 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 132-464 |
| Cow position: | chr22:536884-537223 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 168 |
| Conread position: | 134-463 |
| Cow position: | chr22:298546-298219 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 78, 103 |
| Conread position: | 178-464 |
| Cow position: | chr22:36533907-36533621 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 178-464 |
| Cow position: | chr22:46547834-46547542 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 129 |
| Conread position: | 193-464 |
| Cow position: | chr22:6020507-6020784 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 118 |
| Conread position: | 237-464 |
| Cow position: | chr22:46581695-46581465 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 29, 49 |
Show alignments to all cow chromosomes.