Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-464 |
| Cow position: | chr23:31446467-31446937 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 9-460 |
| Cow position: | chr23:2313578-2313120 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 18-464 |
| Cow position: | chr23:16617183-16616724 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 100 |
| Conread position: | 25-464 |
| Cow position: | chr23:4359505-4359952 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 28-458 |
| Cow position: | chr23:4751694-4752104 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 115, 22 |
| Conread position: | 28-464 |
| Cow position: | chr23:2795882-2795443 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 28-464 |
| Cow position: | chr23:15525293-15525732 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 31 |
| Conread position: | 30-244 |
| Cow position: | chr23:1330606-1330392 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 31-425 |
| Cow position: | chr23:16481669-16481296 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 31-464 |
| Cow position: | chr23:1025370-1024938 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 33-233 |
| Cow position: | chr23:31595497-31595291 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 36-350 |
| Cow position: | chr23:22875945-22875632 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 51, 36 |
| Conread position: | 38-315 |
| Cow position: | chr23:8980800-8980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 38-459 |
| Cow position: | chr23:988952-988529 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 38-462 |
| Cow position: | chr23:19489229-19489662 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-463 |
| Cow position: | chr23:4276647-4277076 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-464 |
| Cow position: | chr23:5779397-5778965 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 38-464 |
| Cow position: | chr23:5875083-5874652 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 38-464 |
| Cow position: | chr23:7273349-7273753 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 13 |
| Conread position: | 38-464 |
| Cow position: | chr23:20301900-20302335 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 38-464 |
| Cow position: | chr23:22147570-22147128 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 39-461 |
| Cow position: | chr23:19332708-19332288 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 78 |
| Conread position: | 39-464 |
| Cow position: | chr23:19950895-19950461 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 39-464 |
| Cow position: | chr23:28216981-28217412 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 14 |
| Conread position: | 42-244 |
| Cow position: | chr23:16616173-16615971 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 180, 74 |
| Conread position: | 43-464 |
| Cow position: | chr23:4434158-4434582 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 45-316 |
| Cow position: | chr23:19017399-19017663 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 48-279 |
| Cow position: | chr23:2765679-2765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 80-464 |
| Cow position: | chr23:2757310-2757716 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 117-464 |
| Cow position: | chr23:2524430-2524075 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 124 |
| Conread position: | 130-464 |
| Cow position: | chr23:20156452-20156095 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 132-464 |
| Cow position: | chr23:3013430-3013768 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 175-464 |
| Cow position: | chr23:25684231-25683939 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 211-464 |
| Cow position: | chr23:31591945-31591680 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 292-465 |
| Cow position: | chr23:2574481-2574659 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 296-464 |
| Cow position: | chr23:31651606-31651438 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 81 |
Show alignments to all cow chromosomes.