Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-297 |
| Cow position: | chr24:13021410-13021704 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-421 |
| Cow position: | chr24:2635858-2636277 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr24:8029889-8030359 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr24:9188992-9188523 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr24:12131743-12131278 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 58 |
| Conread position: | 1-464 |
| Cow position: | chr24:22792915-22793380 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr24:44017284-44017754 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 24-426 |
| Cow position: | chr24:7060861-7061264 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 94 |
| Conread position: | 25-464 |
| Cow position: | chr24:13187949-13188393 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 27-464 |
| Cow position: | chr24:35838864-35838408 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 31-451 |
| Cow position: | chr24:32331113-32331511 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 193, 81 |
| Conread position: | 34-432 |
| Cow position: | chr24:14885466-14885087 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 35-464 |
| Cow position: | chr24:36707631-36708054 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 248, 16 |
| Conread position: | 36-361 |
| Cow position: | chr24:12288950-12288630 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 17 |
| Conread position: | 36-450 |
| Cow position: | chr24:12568026-12568428 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 89, 16 |
| Conread position: | 38-367 |
| Cow position: | chr24:13531760-13531431 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 38-434 |
| Cow position: | chr24:17187320-17187712 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 38-451 |
| Cow position: | chr24:14390947-14390545 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 38-463 |
| Cow position: | chr24:6145134-6145575 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 38-464 |
| Cow position: | chr24:6025322-6024888 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 38-464 |
| Cow position: | chr24:6083791-6084225 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr24:6335469-6335897 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 38-464 |
| Cow position: | chr24:6434015-6434448 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 13 |
| Conread position: | 38-464 |
| Cow position: | chr24:12485543-12485109 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 38-464 |
| Cow position: | chr24:33739568-33739129 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 38-464 |
| Cow position: | chr24:33933142-33933574 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 38-465 |
| Cow position: | chr24:12161653-12162085 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 39-419 |
| Cow position: | chr24:6645193-6645570 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 40-438 |
| Cow position: | chr24:15392527-15392147 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 19 |
| Conread position: | 40-464 |
| Cow position: | chr24:12236831-12237262 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 40-464 |
| Cow position: | chr24:35841838-35841414 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 74 |
| Conread position: | 41-464 |
| Cow position: | chr24:12797984-12797560 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 76 |
| Conread position: | 46-464 |
| Cow position: | chr24:16649521-16649109 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 46-464 |
| Cow position: | chr24:36560302-36559879 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 48-464 |
| Cow position: | chr24:1447353-1447764 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 174, 69 |
| Conread position: | 55-184 |
| Cow position: | chr24:37301289-37301159 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 59-464 |
| Cow position: | chr24:16084866-16084452 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 97-464 |
| Cow position: | chr24:14584927-14585284 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 116-320 |
| Cow position: | chr24:14282754-14282550 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 135 |
| Conread position: | 120-462 |
| Cow position: | chr24:9092419-9092076 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 191 |
| Conread position: | 137-464 |
| Cow position: | chr24:40548752-40549082 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 175 |
| Conread position: | 267-464 |
| Cow position: | chr24:13524126-13524312 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 167, 42 |
Show alignments to all cow chromosomes.