Cow genome map
Conread name: | rche24_n1.y1 |
Conread position: | 1-209 |
Cow position: | chr3:7168185-7168393 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 146 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 150, 52 |
Conread position: | 1-394 |
Cow position: | chr3:72704778-72705172 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 1-419 |
Cow position: | chr3:4285469-4285885 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 16 |
Conread position: | 1-448 |
Cow position: | chr3:19943639-19944086 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 95 |
Conread position: | 1-464 |
Cow position: | chr3:24314059-24314519 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 1-464 |
Cow position: | chr3:32146504-32146040 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 1-464 |
Cow position: | chr3:47082086-47081608 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 124 |
Conread position: | 1-464 |
Cow position: | chr3:47179623-47179153 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 1-464 |
Cow position: | chr3:49614392-49613927 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 16 |
Conread position: | 1-464 |
Cow position: | chr3:57856317-57856787 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 16 |
Conread position: | 2-463 |
Cow position: | chr3:32842850-32842399 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 316 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 114, 52 |
Conread position: | 2-464 |
Cow position: | chr3:7159161-7158683 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 12 |
Conread position: | 2-464 |
Cow position: | chr3:66891379-66890913 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 28 |
Conread position: | 7-464 |
Cow position: | chr3:2917043-2917511 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 115 |
Conread position: | 13-464 |
Cow position: | chr3:66119248-66119705 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 49 |
Conread position: | 15-459 |
Cow position: | chr3:18729538-18729096 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 16 |
Conread position: | 15-461 |
Cow position: | chr3:17936465-17936016 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 301 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 130, 16 |
Conread position: | 17-464 |
Cow position: | chr3:56320906-56321366 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 34 |
Conread position: | 18-464 |
Cow position: | chr3:36126982-36127441 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 104 |
Conread position: | 19-464 |
Cow position: | chr3:6685060-6685511 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 5 |
Conread position: | 19-464 |
Cow position: | chr3:55230098-55229651 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 99 |
Conread position: | 24-464 |
Cow position: | chr3:22335494-22335938 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 37 |
Conread position: | 25-464 |
Cow position: | chr3:5830026-5829578 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 27 |
Conread position: | 25-464 |
Cow position: | chr3:32623406-32622985 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 46 |
Conread position: | 25-464 |
Cow position: | chr3:50914907-50915356 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 30 |
Conread position: | 26-454 |
Cow position: | chr3:45985464-45985046 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 275 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 78, 69 |
Conread position: | 26-464 |
Cow position: | chr3:46861693-46861253 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 25 |
Conread position: | 28-432 |
Cow position: | chr3:56340812-56340415 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 196, 31 |
Conread position: | 28-464 |
Cow position: | chr3:18542800-18542358 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 31 |
Conread position: | 28-464 |
Cow position: | chr3:64017756-64017314 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 31 |
Conread position: | 30-269 |
Cow position: | chr3:52865137-52864899 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 186 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 117, 21 |
Conread position: | 30-432 |
Cow position: | chr3:14634491-14634100 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 22 |
Conread position: | 30-459 |
Cow position: | chr3:57499904-57499479 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 38 |
Conread position: | 30-464 |
Cow position: | chr3:3979996-3980440 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 88 |
Conread position: | 30-464 |
Cow position: | chr3:42580357-42579917 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 87 |
Conread position: | 30-464 |
Cow position: | chr3:64358556-64358120 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 22 |
Conread position: | 31-367 |
Cow position: | chr3:39326300-39326631 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 85 |
Conread position: | 31-450 |
Cow position: | chr3:3054221-3054634 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 21 |
Conread position: | 32-205 |
Cow position: | chr3:14440116-14439943 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 115, 21 |
Conread position: | 33-464 |
Cow position: | chr3:50128262-50127830 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 26 |
Conread position: | 34-430 |
Cow position: | chr3:80871519-80871905 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 34-464 |
Cow position: | chr3:15989426-15988985 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 86 |
Conread position: | 35-464 |
Cow position: | chr3:21945789-21945359 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 49 |
Conread position: | 35-464 |
Cow position: | chr3:41212124-41211687 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 16 |
Conread position: | 36-464 |
Cow position: | chr3:2653726-2654157 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 23 |
Conread position: | 36-464 |
Cow position: | chr3:58947072-58947508 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 15 |
Conread position: | 37-463 |
Cow position: | chr3:31354641-31354216 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 82 |
Conread position: | 37-464 |
Cow position: | chr3:42431849-42432281 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 22 |
Conread position: | 37-464 |
Cow position: | chr3:64028467-64028036 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 14 |
Conread position: | 37-465 |
Cow position: | chr3:26949133-26949563 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 14 |
Conread position: | 38-193 |
Cow position: | chr3:19802041-19802197 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 119 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 106, 21 |
Conread position: | 38-306 |
Cow position: | chr3:49677379-49677645 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 189 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 11, 25 |
Conread position: | 38-332 |
Cow position: | chr3:19938530-19938825 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 214 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 38-338 |
Cow position: | chr3:40340344-40340044 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 177 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 104, 13 |
Conread position: | 38-427 |
Cow position: | chr3:36117279-36117683 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 13 |
Conread position: | 38-462 |
Cow position: | chr3:9716428-9716862 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 13 |
Conread position: | 38-462 |
Cow position: | chr3:37968701-37969127 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 13 |
Conread position: | 38-463 |
Cow position: | chr3:77474379-77474809 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 13 |
Conread position: | 38-464 |
Cow position: | chr3:5047567-5047134 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 24 |
Conread position: | 38-464 |
Cow position: | chr3:6782007-6782434 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 13 |
Conread position: | 38-464 |
Cow position: | chr3:17829030-17828599 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 21 |
Conread position: | 38-464 |
Cow position: | chr3:19878279-19878708 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 38-464 |
Cow position: | chr3:45032358-45032791 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 38-464 |
Cow position: | chr3:46678296-46677864 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 38-464 |
Cow position: | chr3:64650249-64650675 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 13 |
Conread position: | 38-464 |
Cow position: | chr3:70084026-70083602 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 21 |
Conread position: | 39-427 |
Cow position: | chr3:42630630-42631021 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 80 |
Conread position: | 39-464 |
Cow position: | chr3:3522632-3523071 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 12 |
Conread position: | 40-422 |
Cow position: | chr3:63005530-63005144 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 14 |
Conread position: | 40-464 |
Cow position: | chr3:54865072-54864649 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 11 |
Conread position: | 41-279 |
Cow position: | chr3:14588303-14588544 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 178 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 102, 12 |
Conread position: | 43-464 |
Cow position: | chr3:31898350-31897927 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 10 |
Conread position: | 45-464 |
Cow position: | chr3:472163-472582 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 17 |
Conread position: | 46-464 |
Cow position: | chr3:207536-207111 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 71 |
Conread position: | 47-450 |
Cow position: | chr3:52184609-52184189 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 266 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 86, 70 |
Conread position: | 49-432 |
Cow position: | chr3:3805985-3806351 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 69 |
Conread position: | 51-464 |
Cow position: | chr3:54783174-54783594 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 285 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 58, 36 |
Conread position: | 57-464 |
Cow position: | chr3:2633563-2633975 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 60 |
Conread position: | 59-464 |
Cow position: | chr3:18463939-18463537 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 59 |
Conread position: | 62-464 |
Cow position: | chr3:53410560-53410963 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 55 |
Conread position: | 62-464 |
Cow position: | chr3:60210536-60210123 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 69 |
Conread position: | 79-464 |
Cow position: | chr3:66638396-66638790 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 38 |
Conread position: | 103-320 |
Cow position: | chr3:2909413-2909194 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 132-343 |
Cow position: | chr3:57900927-57901139 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 10, 176 |
Conread position: | 133-463 |
Cow position: | chr3:17775810-17776134 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 228 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 14, 109 |
Conread position: | 140-464 |
Cow position: | chr3:7168516-7168843 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 160 |
Conread position: | 271-464 |
Cow position: | chr3:14439908-14439711 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 160, 39 |
Show alignments to all cow chromosomes.