Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-315 |
| Cow position: | chr4:23114791-23114476 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-316 |
| Cow position: | chr4:10408160-10408482 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 120 |
| Conread position: | 1-464 |
| Cow position: | chr4:13547413-13547884 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr4:16055986-16056456 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 121 |
| Conread position: | 1-464 |
| Cow position: | chr4:47764785-47764315 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 1-464 |
| Cow position: | chr4:65224149-65223679 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 7-464 |
| Cow position: | chr4:32211564-32212022 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 16 |
| Conread position: | 11-464 |
| Cow position: | chr4:18425126-18424670 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 13-464 |
| Cow position: | chr4:66925405-66925854 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 39 |
| Conread position: | 17-451 |
| Cow position: | chr4:3125179-3125620 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 18-464 |
| Cow position: | chr4:47718205-47717752 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 25-464 |
| Cow position: | chr4:5879586-5880020 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 26 |
| Conread position: | 25-464 |
| Cow position: | chr4:6269220-6268773 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 26-464 |
| Cow position: | chr4:528403-528848 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 28-464 |
| Cow position: | chr4:3961007-3961446 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 31 |
| Conread position: | 30-458 |
| Cow position: | chr4:1464507-1464076 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 32-464 |
| Cow position: | chr4:28830454-28830884 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 35-459 |
| Cow position: | chr4:6215137-6214709 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 35-463 |
| Cow position: | chr4:496521-496103 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 38-221 |
| Cow position: | chr4:9311658-9311843 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 38-464 |
| Cow position: | chr4:602418-602848 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 38-464 |
| Cow position: | chr4:1931199-1930769 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 38-464 |
| Cow position: | chr4:6490925-6490510 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 38-464 |
| Cow position: | chr4:17530993-17530575 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 278 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 38-464 |
| Cow position: | chr4:44724504-44724938 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 39-464 |
| Cow position: | chr4:39272516-39272081 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 40-458 |
| Cow position: | chr4:34185434-34185022 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 45-382 |
| Cow position: | chr4:51044460-51044131 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 148 |
| Conread position: | 46-278 |
| Cow position: | chr4:58883248-58883017 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 72 |
| Conread position: | 46-292 |
| Cow position: | chr4:54190290-54190533 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 46-454 |
| Cow position: | chr4:46663632-46664031 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 71 |
| Conread position: | 48-464 |
| Cow position: | chr4:21338559-21338148 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 53-464 |
| Cow position: | chr4:66179552-66179133 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 56-451 |
| Cow position: | chr4:1371572-1371168 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 61 |
| Conread position: | 62-464 |
| Cow position: | chr4:11393891-11393491 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 63-464 |
| Cow position: | chr4:8598686-8598302 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 369, 52 |
| Conread position: | 95-307 |
| Cow position: | chr4:12608027-12607812 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 105-464 |
| Cow position: | chr4:26887356-26887008 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 131-464 |
| Cow position: | chr4:11618377-11618708 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 80 |
| Conread position: | 137-464 |
| Cow position: | chr4:4175959-4176284 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 139 |
| Conread position: | 138-464 |
| Cow position: | chr4:27332967-27333290 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 7 |
Show alignments to all cow chromosomes.