Cow genome map
| Conread name: | rche24_n1.y1 |
| Conread position: | 1-438 |
| Cow position: | chr7:26025735-26026188 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 1-461 |
| Cow position: | chr7:47374708-47375169 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr7:3234972-3234502 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 1-464 |
| Cow position: | chr7:20799726-20799261 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 2-464 |
| Cow position: | chr7:61558925-61559394 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 9-269 |
| Cow position: | chr7:39108996-39108748 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 10-464 |
| Cow position: | chr7:6489589-6489138 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 41 |
| Conread position: | 12-464 |
| Cow position: | chr7:17147-16691 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 41 |
| Conread position: | 12-464 |
| Cow position: | chr7:20528952-20528494 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 12-464 |
| Cow position: | chr7:20555440-20555895 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 43 |
| Conread position: | 12-464 |
| Cow position: | chr7:38536245-38536690 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 40 |
| Conread position: | 13-462 |
| Cow position: | chr7:36085059-36085515 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 16 |
| Conread position: | 13-464 |
| Cow position: | chr7:1357947-1357505 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 13-464 |
| Cow position: | chr7:5662099-5662555 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 42 |
| Conread position: | 17-464 |
| Cow position: | chr7:6648929-6648474 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 101 |
| Conread position: | 18-465 |
| Cow position: | chr7:51013687-51014134 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 268 |
| Conread position: | 19-432 |
| Cow position: | chr7:68778652-68778233 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 221 |
| Conread position: | 22-464 |
| Cow position: | chr7:52120341-52119904 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 24-464 |
| Cow position: | chr7:26893481-26893931 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 96 |
| Conread position: | 25-463 |
| Cow position: | chr7:25439263-25439686 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 93 |
| Conread position: | 25-464 |
| Cow position: | chr7:11467000-11466557 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 26-464 |
| Cow position: | chr7:3301418-3300973 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 27-381 |
| Cow position: | chr7:41487327-41487671 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 28-283 |
| Cow position: | chr7:522106-521849 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 28-464 |
| Cow position: | chr7:1372911-1372471 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 28-464 |
| Cow position: | chr7:1400616-1400179 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 28-464 |
| Cow position: | chr7:27786370-27786804 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 31 |
| Conread position: | 28-464 |
| Cow position: | chr7:46902338-46901899 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 30-204 |
| Cow position: | chr7:35297856-35297683 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 30-314 |
| Cow position: | chr7:67426158-67426442 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 112, 29 |
| Conread position: | 30-461 |
| Cow position: | chr7:35287819-35287381 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 30-462 |
| Cow position: | chr7:26890545-26890985 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 69 |
| Conread position: | 32-320 |
| Cow position: | chr7:68858351-68858061 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 32-463 |
| Cow position: | chr7:30119797-30119362 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 81, 67 |
| Conread position: | 34-305 |
| Cow position: | chr7:29469612-29469881 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 75 |
| Conread position: | 34-451 |
| Cow position: | chr7:27125912-27126327 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 34-464 |
| Cow position: | chr7:48633149-48633561 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 25 |
| Conread position: | 34-465 |
| Cow position: | chr7:67416784-67417226 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 35-428 |
| Cow position: | chr7:26883869-26884264 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 35-464 |
| Cow position: | chr7:1611457-1611030 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 83 |
| Conread position: | 36-432 |
| Cow position: | chr7:51084368-51084747 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 179, 80 |
| Conread position: | 36-464 |
| Cow position: | chr7:63020597-63021029 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 81 |
| Conread position: | 37-464 |
| Cow position: | chr7:27102364-27101933 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 16 |
| Conread position: | 38-302 |
| Cow position: | chr7:49290343-49290610 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 38-370 |
| Cow position: | chr7:51911604-51911270 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 80 |
| Conread position: | 38-464 |
| Cow position: | chr7:993981-994416 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 78 |
| Conread position: | 38-464 |
| Cow position: | chr7:3154529-3154947 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 38-464 |
| Cow position: | chr7:11446304-11446736 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 38-464 |
| Cow position: | chr7:21309958-21310386 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 13 |
| Conread position: | 38-464 |
| Cow position: | chr7:21975988-21975556 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 23 |
| Conread position: | 38-464 |
| Cow position: | chr7:41870181-41869765 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 38-465 |
| Cow position: | chr7:6643125-6642695 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 21 |
| Conread position: | 39-447 |
| Cow position: | chr7:68436297-68435887 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 40-333 |
| Cow position: | chr7:60857606-60857326 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 183, 11 |
| Conread position: | 40-464 |
| Cow position: | chr7:23816217-23815789 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 41-463 |
| Cow position: | chr7:23835872-23836300 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 111, 21 |
| Conread position: | 41-464 |
| Cow position: | chr7:63385104-63385521 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 43-432 |
| Cow position: | chr7:27144087-27144469 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 13 |
| Conread position: | 65-464 |
| Cow position: | chr7:39556314-39555915 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 71-463 |
| Cow position: | chr7:7297095-7296707 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 72-432 |
| Cow position: | chr7:3729761-3730122 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 76-451 |
| Cow position: | chr7:102815-102436 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 110-464 |
| Cow position: | chr7:68907664-68908008 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 116-270 |
| Cow position: | chr7:21241969-21241814 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 116-464 |
| Cow position: | chr7:41489942-41490292 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 125 |
| Conread position: | 120-313 |
| Cow position: | chr7:24421664-24421858 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 118 |
| Conread position: | 132-464 |
| Cow position: | chr7:47050545-47050864 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 133-430 |
| Cow position: | chr7:25101879-25102169 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 9 |
| Conread position: | 138-464 |
| Cow position: | chr7:26925188-26924858 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 169 |
| Conread position: | 145-464 |
| Cow position: | chr7:68479023-68479348 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 162 |
| Conread position: | 157-464 |
| Cow position: | chr7:29370711-29370402 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 66, 143 |
| Conread position: | 179-460 |
| Cow position: | chr7:1736015-1735749 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 239-463 |
| Cow position: | chr7:58993150-58993374 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 194, 70 |
Show alignments to all cow chromosomes.