Cow genome map

Conread name: rche24_n1.y1

Conread position: 1-438
Cow position:
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 127

Conread position: 1-461
Cow position:
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-464
Cow position:
Alignm length: 476
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 1-464
Cow position:
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 121

Conread position: 2-464
Cow position:
Alignm length: 475
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 9-269
Cow position:
Alignm length: 267
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 9

Conread position: 10-464
Cow position:
Alignm length: 465
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 12-464
Cow position:
Alignm length: 464
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 41

Conread position: 12-464
Cow position:
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 43

Conread position: 12-464
Cow position:
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 43

Conread position: 12-464
Cow position:
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 40

Conread position: 13-462
Cow position:
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 13-464
Cow position:
Alignm length: 462
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 13-464
Cow position:
Alignm length: 468
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 42

Conread position: 17-464
Cow position:
Alignm length: 458
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 101

Conread position: 18-465
Cow position:
Alignm length: 467
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 268

Conread position: 19-432
Cow position:
Alignm length: 434
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 221

Conread position: 22-464
Cow position:
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 24-464
Cow position:
Alignm length: 453
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 96

Conread position: 25-463
Cow position:
Alignm length: 445
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 93

Conread position: 25-464
Cow position:
Alignm length: 451
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 34

Conread position: 26-464
Cow position:
Alignm length: 450
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 27

Conread position: 27-381
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 68

Conread position: 28-283
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 28-464
Cow position:
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 28-464
Cow position:
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 28-464
Cow position:
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 31

Conread position: 28-464
Cow position:
Alignm length: 448
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 31

Conread position: 30-204
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 14, 30

Conread position: 30-314
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 29

Conread position: 30-461
Cow position:
Alignm length: 442
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 30-462
Cow position:
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 69

Conread position: 32-320
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 19

Conread position: 32-463
Cow position:
Alignm length: 447
Alignm identity: 291
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 67

Conread position: 34-305
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 130, 75

Conread position: 34-451
Cow position:
Alignm length: 423
Alignm identity: 269
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 19

Conread position: 34-464
Cow position:
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 25

Conread position: 34-465
Cow position:
Alignm length: 447
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 35-428
Cow position:
Alignm length: 403
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 84

Conread position: 35-464
Cow position:
Alignm length: 437
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 83

Conread position: 36-432
Cow position:
Alignm length: 399
Alignm identity: 261
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 179, 80

Conread position: 36-464
Cow position:
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 81

Conread position: 37-464
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 16

Conread position: 38-302
Cow position:
Alignm length: 272
Alignm identity: 184
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 58

Conread position: 38-370
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 80

Conread position: 38-464
Cow position:
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 78

Conread position: 38-464
Cow position:
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 15

Conread position: 38-464
Cow position:
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 13

Conread position: 38-464
Cow position:
Alignm length: 438
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 23

Conread position: 38-464
Cow position:
Alignm length: 434
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 46

Conread position: 38-465
Cow position:
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 21

Conread position: 39-447
Cow position:
Alignm length: 415
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 40-333
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 183, 11

Conread position: 40-464
Cow position:
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 13

Conread position: 41-463
Cow position:
Alignm length: 441
Alignm identity: 292
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 21

Conread position: 41-464
Cow position:
Alignm length: 434
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 11

Conread position: 43-432
Cow position:
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 13

Conread position: 65-464
Cow position:
Alignm length: 408
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 49

Conread position: 71-463
Cow position:
Alignm length: 402
Alignm identity: 260
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 46

Conread position: 72-432
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 19

Conread position: 76-451
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 41

Conread position: 110-464
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 37, 68

Conread position: 116-270
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 27

Conread position: 116-464
Cow position:
Alignm length: 360
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 125

Conread position: 120-313
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 22, 118

Conread position: 132-464
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 102

Conread position: 133-430
Cow position:
Alignm length: 300
Alignm identity: 193
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 9

Conread position: 138-464
Cow position:
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 169

Conread position: 145-464
Cow position:
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 162

Conread position: 157-464
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 66, 143

Conread position: 179-460
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 239-463
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 194, 70

Show alignments to all cow chromosomes.