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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
100-361
               

               
Cow position:
               
chr11:31417328-31417589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
111-279
               

               
Cow position:
               
chr11:34106750-34106584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
111-294
               

               
Cow position:
               
chr11:77128580-77128761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
113-361
               

               
Cow position:
               
chr11:18543586-18543355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr11:67312700-67312972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
114-361
               

               
Cow position:
               
chr11:70950791-70951033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
116-292
               

               
Cow position:
               
chr11:58588271-58588443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr11:59902816-59903048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
164, 39
               

               
Conread position:
               
116-386
               

               
Cow position:
               
chr11:6423477-6423207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
116-408
               

               
Cow position:
               
chr11:45742303-45742585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr11:22676040-22676330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
116-411
               

               
Cow position:
               
chr11:46747940-46747640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
118-294
               

               
Cow position:
               
chr11:40573404-40573235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
119-289
               

               
Cow position:
               
chr11:22499436-22499271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
119-294
               

               
Cow position:
               
chr11:83579246-83579076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
119-359
               

               
Cow position:
               
chr11:35791897-35791656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
119-361
               

               
Cow position:
               
chr11:81300695-81300455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
120-281
               

               
Cow position:
               
chr11:48512094-48512251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
121-387
               

               
Cow position:
               
chr11:53773609-53773878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
122-306
               

               
Cow position:
               
chr11:30925084-30925267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
122-387
               

               
Cow position:
               
chr11:80639616-80639360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr11:41809560-41809385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
123-366
               

               
Cow position:
               
chr11:6633645-6633896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
123-382
               

               
Cow position:
               
chr11:25120000-25119749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
125-385
               

               
Cow position:
               
chr11:14470305-14470555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
236, 29
               

               
Conread position:
               
126-288
               

               
Cow position:
               
chr11:42044057-42043902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
126-292
               

               
Cow position:
               
chr11:20602159-20602325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
126-294
               

               
Cow position:
               
chr11:34963001-34963170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
126-297
               

               
Cow position:
               
chr11:79019124-79018955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
126-300
               

               
Cow position:
               
chr11:42359049-42359225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 73
               

               
Conread position:
               
126-319
               

               
Cow position:
               
chr11:61958809-61958617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 73
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr11:71935018-71934829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
126-335
               

               
Cow position:
               
chr11:34113200-34113402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
126-343
               

               
Cow position:
               
chr11:71868667-71868455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
133, 27
               

               
Conread position:
               
126-344
               

               
Cow position:
               
chr11:23586572-23586789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr11:17493413-17493638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr11:87155456-87155676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-357
               

               
Cow position:
               
chr11:9221791-9221560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
126-358
               

               
Cow position:
               
chr11:35926970-35926746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr11:19247263-19247039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
126-374
               

               
Cow position:
               
chr11:73573581-73573830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
154, 28
               

               
Conread position:
               
126-378
               

               
Cow position:
               
chr11:67600719-67600960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
126-378
               

               
Cow position:
               
chr11:82940685-82940448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
126-381
               

               
Cow position:
               
chr11:11994772-11994525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
126-384
               

               
Cow position:
               
chr11:46746568-46746829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
126-385
               

               
Cow position:
               
chr11:47837254-47837514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 30
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr11:11125599-11125862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr11:34646524-34646788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr11:75285831-75285563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
126-391
               

               
Cow position:
               
chr11:49057339-49057583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
236, 27
               

               
Conread position:
               
126-393
               

               
Cow position:
               
chr11:58102840-58102562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
126-397
               

               
Cow position:
               
chr11:49148975-49149251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
126-413
               

               
Cow position:
               
chr11:24438289-24437997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
127-282
               

               
Cow position:
               
chr11:64638590-64638437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr11:77319351-77319578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
127-379
               

               
Cow position:
               
chr11:23407400-23407644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
127-380
               

               
Cow position:
               
chr11:30210845-30211075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
127-385
               

               
Cow position:
               
chr11:40608658-40608404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
176, 62
               

               
Conread position:
               
127-386
               

               
Cow position:
               
chr11:259234-258983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
231, 31
               

               
Conread position:
               
127-387
               

               
Cow position:
               
chr11:13499954-13500200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
128-403
               

               
Cow position:
               
chr11:10956935-10956662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr11:78820092-78820315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
129-378
               

               
Cow position:
               
chr11:48429053-48429306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
129-386
               

               
Cow position:
               
chr11:55333847-55334110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
129-390
               

               
Cow position:
               
chr11:83043424-83043169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
229, 24
               

               
Conread position:
               
129-413
               

               
Cow position:
               
chr11:75480085-75479805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr11:41313717-41313496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr11:18910939-18910708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr11:67615308-67615070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 40
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr11:30830676-30830435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr11:31875030-31875278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr11:50152876-50152625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr11:8259013-8259266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr11:48295972-48296212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
243, 60
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr11:49872947-49872699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
130-383
               

               
Cow position:
               
chr11:17860217-17859966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
158, 60
               

               
Conread position:
               
130-383
               

               
Cow position:
               
chr11:35347813-35347562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
130-384
               

               
Cow position:
               
chr11:42291895-42291651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
242, 14
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr11:26144157-26143904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr11:42083411-42083647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
233, 69
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr11:6400130-6399873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr11:32126544-32126809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
130-408
               

               
Cow position:
               
chr11:2084081-2084359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr11:52690581-52690307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
232, 61
               

               
Conread position:
               
132-296
               

               
Cow position:
               
chr11:80761439-80761275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
132-407
               

               
Cow position:
               
chr11:16314812-16315083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
132-424
               

               
Cow position:
               
chr11:1380614-1380905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
133-292
               

               
Cow position:
               
chr11:8147956-8147800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr11:84499007-84498854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr11:68206902-68206695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
133-353
               

               
Cow position:
               
chr11:58927526-58927731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr11:82289524-82289749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
133-358
               

               
Cow position:
               
chr11:46329437-46329662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
133-360
               

               
Cow position:
               
chr11:3780482-3780250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:3739893-3740130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:5416824-5417052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:13592677-13592905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 66
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:23272062-23271840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:36977748-36977973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:37804613-37804386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr11:72292493-72292727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
133-374
               

               
Cow position:
               
chr11:18851850-18852081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr11:6233937-6233696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
133-380
               

               
Cow position:
               
chr11:2917644-2917408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr11:65762649-65762399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr11:29659502-29659744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr11:19946376-19946613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr11:29699760-29699495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr11:17227698-17227464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr11:52297279-52297028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr11:15016998-15017252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:7460674-7460433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:36914625-36914375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:50472258-50472510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:58594447-58594196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:61454574-61454307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr11:62964432-62964687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
133-388
               

               
Cow position:
               
chr11:29954312-29954560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr11:13162279-13162529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr11:70483910-70483654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr11:46922947-46922693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr11:44031948-44032213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
133-399
               

               
Cow position:
               
chr11:55636284-55636024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-406
               

               
Cow position:
               
chr11:80564234-80564509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr11:15369328-15369602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
133-411
               

               
Cow position:
               
chr11:1625282-1625005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
133-413
               

               
Cow position:
               
chr11:56288488-56288765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
229, 20
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr11:25620457-25620171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr11:5433210-5433512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
134-289
               

               
Cow position:
               
chr11:23232572-23232424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-332
               

               
Cow position:
               
chr11:33414177-33414375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr11:3920361-3920139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr11:5075286-5075066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr11:15287385-15287609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
134-359
               

               
Cow position:
               
chr11:75090276-75090055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr11:30728344-30728567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
134-376
               

               
Cow position:
               
chr11:35981204-35980961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr11:41438245-41437997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr11:4207254-4207499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
155, 56
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr11:33409319-33409083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
134-384
               

               
Cow position:
               
chr11:68909903-68909663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
151, 62
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr11:13067722-13067475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
134-390
               

               
Cow position:
               
chr11:8669953-8670216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
134-405
               

               
Cow position:
               
chr11:4663103-4662851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chr11:84385693-84385410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
220, 19
               

               
Conread position:
               
134-420
               

               
Cow position:
               
chr11:8457961-8457668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
134-424
               

               
Cow position:
               
chr11:83032623-83032909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr11:61137230-61137071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr11:73512495-73512333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
135-359
               

               
Cow position:
               
chr11:30209875-30209659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-360
               

               
Cow position:
               
chr11:19593763-19593984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr11:42160110-42159896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr11:82731054-82730818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr11:8545069-8544834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
135-378
               

               
Cow position:
               
chr11:68913085-68913325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
151, 18
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr11:43360833-43360599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
227, 54
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr11:84890771-84890538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr11:72443057-72443306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr11:77745307-77745058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
135-388
               

               
Cow position:
               
chr11:41986102-41985856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
135-390
               

               
Cow position:
               
chr11:67614980-67614731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr11:39060658-39060398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
232, 55
               

               
Conread position:
               
135-406
               

               
Cow position:
               
chr11:62663289-62663029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
136-292
               

               
Cow position:
               
chr11:23138108-23137955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
136-355
               

               
Cow position:
               
chr11:39499301-39499515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr11:47772445-47772216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr11:81168082-81167865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr11:30192120-30192368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr11:62789075-62789321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
226, 66
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr11:85723643-85723884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
231, 17
               

               
Conread position:
               
136-387
               

               
Cow position:
               
chr11:6245263-6245517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
136-387
               

               
Cow position:
               
chr11:59024413-59024163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
174, 8
               

               
Conread position:
               
136-388
               

               
Cow position:
               
chr11:66041221-66041463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
136-421
               

               
Cow position:
               
chr11:48085863-48086147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
137-289
               

               
Cow position:
               
chr11:16320233-16320379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
137-294
               

               
Cow position:
               
chr11:62155584-62155739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr11:4653028-4652869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
137-358
               

               
Cow position:
               
chr11:17083365-17083151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
6, 54
               

               
Conread position:
               
137-376
               

               
Cow position:
               
chr11:4637226-4636990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
226, 55
               

               
Conread position:
               
137-385
               

               
Cow position:
               
chr11:42786748-42786492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr11:19592049-19591795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
138-294
               

               
Cow position:
               
chr11:36658871-36658723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chr11:56290459-56290630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
138-361
               

               
Cow position:
               
chr11:63435469-63435688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
138-365
               

               
Cow position:
               
chr11:35352091-35351864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
138-378
               

               
Cow position:
               
chr11:64104105-64103869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
138-383
               

               
Cow position:
               
chr11:63999140-63998902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
235, 15
               

               
Conread position:
               
138-403
               

               
Cow position:
               
chr11:17990288-17990025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
151, 11
               

               
Conread position:
               
139-289
               

               
Cow position:
               
chr11:377694-377546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
139-294
               

               
Cow position:
               
chr11:47004297-47004446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr11:2933092-2933250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr11:62609552-62609708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr11:62778392-62778556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
139-322
               

               
Cow position:
               
chr11:83230452-83230271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
175, 51
               

               
Conread position:
               
139-361
               

               
Cow position:
               
chr11:55744415-55744635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr11:16907100-16906853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr11:21844184-21843961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
139-376
               

               
Cow position:
               
chr11:27248440-27248668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr11:62742693-62742467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr11:29960246-29960474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
139-380
               

               
Cow position:
               
chr11:20205904-20205673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
234, 63
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr11:42066809-42067051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr11:16934709-16934449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 133
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr11:27746871-27747113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
222, 50
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr11:34644604-34644847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
139-386
               

               
Cow position:
               
chr11:69977919-69978155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr11:3282977-3283236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
160, 55
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr11:5201704-5201454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 48
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr11:20761795-20762048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr11:62230128-62230379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr11:70756431-70756670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
224, 14
               

               
Conread position:
               
139-393
               

               
Cow position:
               
chr11:375407-375658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
139-403
               

               
Cow position:
               
chr11:80923373-80923112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr11:21507951-21508218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
139-408
               

               
Cow position:
               
chr11:42836008-42835743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
139-409
               

               
Cow position:
               
chr11:30370057-30370315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
139-415
               

               
Cow position:
               
chr11:71492912-71492643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
219, 73
               

               
Conread position:
               
140-261
               

               
Cow position:
               
chr11:49231822-49231941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
140-286
               

               
Cow position:
               
chr11:39118706-39118850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
140-293
               

               
Cow position:
               
chr11:83033286-83033140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
140-297
               

               
Cow position:
               
chr11:33310924-33311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chr11:70609737-70609912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chr11:48272149-48272319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
140-313
               

               
Cow position:
               
chr11:56575813-56575641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr11:8684133-8683912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr11:57608505-57608300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
140-380
               

               
Cow position:
               
chr11:7559948-7560187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
140-380
               

               
Cow position:
               
chr11:62813000-62812767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
227, 13
               

               
Conread position:
               
140-381
               

               
Cow position:
               
chr11:30808645-30808407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
140-382
               

               
Cow position:
               
chr11:41293869-41293613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 15
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr11:30964295-30964531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr11:1067489-1067246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
223, 9
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr11:64104948-64105182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
140-394
               

               
Cow position:
               
chr11:48649921-48650183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
140-395
               

               
Cow position:
               
chr11:81762811-81763077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 49
               

               
Conread position:
               
140-404
               

               
Cow position:
               
chr11:72375733-72375462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
140-406
               

               
Cow position:
               
chr11:13940141-13940392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 9
               

               
Conread position:
               
140-423
               

               
Cow position:
               
chr11:36182639-36182921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
141-275
               

               
Cow position:
               
chr11:52983626-52983757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr11:22747378-22747227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 53
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr11:36799359-36799204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr11:7590143-7590302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chr11:28644037-28644206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
141-322
               

               
Cow position:
               
chr11:34692802-34692983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
141-341
               

               
Cow position:
               
chr11:36112374-36112564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-353
               

               
Cow position:
               
chr11:22102949-22102740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr11:35723921-35724136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
141-361
               

               
Cow position:
               
chr11:56311645-56311434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-372
               

               
Cow position:
               
chr11:39855064-39854846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr11:48544382-48544614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
141-381
               

               
Cow position:
               
chr11:83926000-83926222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
141-385
               

               
Cow position:
               
chr11:47639076-47638835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr11:38211595-38211832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
182, 49
               

               
Conread position:
               
141-391
               

               
Cow position:
               
chr11:36286645-36286903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 53
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr11:70206271-70206530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr11:17721852-17721582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
142-283
               

               
Cow position:
               
chr11:49934780-49934641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr11:5249577-5249350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr11:36981514-36981731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
142-378
               

               
Cow position:
               
chr11:23251640-23251417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
142-382
               

               
Cow position:
               
chr11:49152900-49153131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
220, 57
               

               
Conread position:
               
142-390
               

               
Cow position:
               
chr11:35670000-35669767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-399
               

               
Cow position:
               
chr11:32254267-32254012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
142-400
               

               
Cow position:
               
chr11:30165462-30165718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
219, 11
               

               
Conread position:
               
142-401
               

               
Cow position:
               
chr11:63866710-63866452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr11:8495983-8496240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
142-427
               

               
Cow position:
               
chr11:83397856-83398146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
221, 62
               

               
Conread position:
               
143-253
               

               
Cow position:
               
chr11:38874450-38874342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
143-293
               

               
Cow position:
               
chr11:33345398-33345545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
143-302
               

               
Cow position:
               
chr11:63482474-63482320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
143-346
               

               
Cow position:
               
chr11:8988278-8988085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
143-362
               

               
Cow position:
               
chr11:29786545-29786326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
143-371
               

               
Cow position:
               
chr11:6297129-6296901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
143-375
               

               
Cow position:
               
chr11:19657270-19657031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
143-383
               

               
Cow position:
               
chr11:47311031-47310795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr11:72870850-72871108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
144-285
               

               
Cow position:
               
chr11:33527004-33527144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
144-285
               

               
Cow position:
               
chr11:36986906-36987041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-293
               

               
Cow position:
               
chr11:63920100-63919954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-304
               

               
Cow position:
               
chr11:33697594-33697747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chr11:40478900-40478735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 47
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chr11:70825900-70826067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-316
               

               
Cow position:
               
chr11:53147581-53147410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
144-328
               

               
Cow position:
               
chr11:70086288-70086461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-358
               

               
Cow position:
               
chr11:62754365-62754135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
144-358
               

               
Cow position:
               
chr11:66326157-66325944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr11:29677154-29677371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
144-360
               

               
Cow position:
               
chr11:55972979-55972765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
144-360
               

               
Cow position:
               
chr11:62482593-62482807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:2639703-2639478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:27565286-27565482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:36920625-36920412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:48474657-48474875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 11
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:51729240-51729440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:53816810-53817021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:67345700-67345493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr11:68112308-68112093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
144-371
               

               
Cow position:
               
chr11:32198890-32199120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
144-371
               

               
Cow position:
               
chr11:45872357-45872134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
144-374
               

               
Cow position:
               
chr11:4199225-4199452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr11:48932633-48932407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr11:50072891-50073142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr11:65157455-65157223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
161, 28
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr11:70978780-70978548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
208, 9
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr11:78381109-78380887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr11:2327639-2327872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr11:37919092-37918858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr11:18924699-18924933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr11:30708460-30708692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr11:27907735-27907958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
144-385
               

               
Cow position:
               
chr11:22977921-22977693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr11:30638996-30638757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
219, 11
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr11:33349748-33349509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
212, 54
               

               
Conread position:
               
144-386
               

               
Cow position:
               
chr11:61675421-61675652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr11:62239699-62239937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
218, 9
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr11:65058665-65058415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr11:36940643-36940403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-388
               

               
Cow position:
               
chr11:59862160-59862402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr11:53510546-53510299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr11:37778877-37778622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
144-395
               

               
Cow position:
               
chr11:42884832-42884582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
144-401
               

               
Cow position:
               
chr11:32777632-32777883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
161, 55
               

               
Conread position:
               
144-401
               

               
Cow position:
               
chr11:70422638-70422388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr11:39462577-39462830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr11:66572543-66572279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
149, 9
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr11:27913238-27913497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
190, 9
               

               
Conread position:
               
145-288
               

               
Cow position:
               
chr11:76606627-76606767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr11:29983762-29983615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 8
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr11:63847801-63847963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-312
               

               
Cow position:
               
chr11:71501178-71501010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
145-358
               

               
Cow position:
               
chr11:20684618-20684407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr11:71854324-71854120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr11:2788347-2788561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr11:25791741-25791527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr11:34144960-34144753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr11:64029308-64029101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-371
               

               
Cow position:
               
chr11:8461958-8462181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
145-373
               

               
Cow position:
               
chr11:39249927-39250146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
213, 8
               

               
Conread position:
               
145-374
               

               
Cow position:
               
chr11:46998934-46999164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
145-377
               

               
Cow position:
               
chr11:32398593-32398827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
145-379
               

               
Cow position:
               
chr11:18698831-18699058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
145-382
               

               
Cow position:
               
chr11:45277195-45276960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
145-386
               

               
Cow position:
               
chr11:52464367-52464593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr11:30172263-30172495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr11:33348231-33348002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr11:71110844-71111094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr11:17889776-17889524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 8
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr11:5219204-5218955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 8
               

               
Conread position:
               
145-399
               

               
Cow position:
               
chr11:64077551-64077293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
41, 8
               

               
Conread position:
               
145-403
               

               
Cow position:
               
chr11:15772757-15772505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
228, 8
               

               
Conread position:
               
145-403
               

               
Cow position:
               
chr11:62811252-62811502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-404
               

               
Cow position:
               
chr11:40395393-40395650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
145-421
               

               
Cow position:
               
chr11:76890000-76890272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
213, 8
               

               
Conread position:
               
146-312
               

               
Cow position:
               
chr11:76114600-76114761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
146-361
               

               
Cow position:
               
chr11:44016929-44017150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
146-361
               

               
Cow position:
               
chr11:53462898-53463108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
146-362
               

               
Cow position:
               
chr11:4674490-4674277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr11:5328735-5328966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
147-289
               

               
Cow position:
               
chr11:29946958-29946818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
147-355
               

               
Cow position:
               
chr11:40794397-40794191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
147-375
               

               
Cow position:
               
chr11:28367660-28367895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
147-377
               

               
Cow position:
               
chr11:6006263-6006495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 6
               

               
Conread position:
               
147-378
               

               
Cow position:
               
chr11:21421980-21421751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
215, 6
               

               
Conread position:
               
147-387
               

               
Cow position:
               
chr11:5961260-5961500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
147-418
               

               
Cow position:
               
chr11:5602406-5602684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 6
               

               
Conread position:
               
147-430
               

               
Cow position:
               
chr11:41212998-41213292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 233
               

               
Conread position:
               
148-361
               

               
Cow position:
               
chr11:60486462-60486250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
148-378
               

               
Cow position:
               
chr11:21885790-21886012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
149-277
               

               
Cow position:
               
chr11:56654513-56654639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
149-290
               

               
Cow position:
               
chr11:64868063-64867924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
149-330
               

               
Cow position:
               
chr11:45849542-45849361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr11:59872888-59873063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
149-341
               

               
Cow position:
               
chr11:63909706-63909509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 50
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr11:40459065-40459260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
126, 50
               

               
Conread position:
               
149-361
               

               
Cow position:
               
chr11:7500700-7500915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
149-378
               

               
Cow position:
               
chr11:64101733-64101960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr11:17676415-17676184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
226, 41
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr11:9270767-9270548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr11:66188359-66188131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-420
               

               
Cow position:
               
chr11:1485917-1485635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
149-428
               

               
Cow position:
               
chr11:17831263-17830972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr11:15373797-15373943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr11:81931153-81931013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr11:48063842-48063687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
150-312
               

               
Cow position:
               
chr11:54334287-54334447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-340
               

               
Cow position:
               
chr11:84977400-84977220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
150-348
               

               
Cow position:
               
chr11:34136202-34136394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
150-354
               

               
Cow position:
               
chr11:35665604-35665404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr11:76652978-76653185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:2874350-2874568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:12077127-12076919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:62889935-62889726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:63065614-63065818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:64009678-64009892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr11:81406203-81406001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr11:34467530-34467736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
217, 21
               

               
Conread position:
               
150-374
               

               
Cow position:
               
chr11:80413056-80412831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
150-376
               

               
Cow position:
               
chr11:78544242-78544465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr11:55761827-55762043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
213, 40
               

               
Conread position:
               
150-379
               

               
Cow position:
               
chr11:63434099-63433878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr11:71345365-71345131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
164, 49
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr11:17321606-17321859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr11:20194467-20194233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
213, 46
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr11:35536546-35536766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-384
               

               
Cow position:
               
chr11:65826792-65826566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-385
               

               
Cow position:
               
chr11:27405111-27404877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
155, 39
               

               
Conread position:
               
150-386
               

               
Cow position:
               
chr11:48659893-48660120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr11:897632-897855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr11:3714784-3715012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr11:17278713-17278487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
216, 43
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr11:28078462-28078679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr11:57503441-57503671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
152, 52
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr11:68883677-68883916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
150-403
               

               
Cow position:
               
chr11:34616217-34616468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
150-408
               

               
Cow position:
               
chr11:63396777-63397031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
222, 46
               

               
Conread position:
               
150-409
               

               
Cow position:
               
chr11:27343229-27343482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-420
               

               
Cow position:
               
chr11:41549374-41549116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
151-329
               

               
Cow position:
               
chr11:7924629-7924458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
151-411
               

               
Cow position:
               
chr11:21590341-21590605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
153-280
               

               
Cow position:
               
chr11:18608276-18608151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
112, 51
               

               
Conread position:
               
153-286
               

               
Cow position:
               
chr11:61130703-61130574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
153-289
               

               
Cow position:
               
chr11:68173493-68173627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
153-294
               

               
Cow position:
               
chr11:1362506-1362367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-295
               

               
Cow position:
               
chr11:21910665-21910526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
153-295
               

               
Cow position:
               
chr11:58400214-58400350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr11:71341503-71341361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr11:30272969-30272821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr11:31885678-31885842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
153-348
               

               
Cow position:
               
chr11:37436024-37435834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
153-355
               

               
Cow position:
               
chr11:54742119-54741925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
153-356
               

               
Cow position:
               
chr11:38670647-38670851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
153-357
               

               
Cow position:
               
chr11:63202288-63202085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
153-358
               

               
Cow position:
               
chr11:5217506-5217297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
153-358
               

               
Cow position:
               
chr11:39554236-39554026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr11:13864143-13863936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr11:14875814-14875602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr11:32436296-32436511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr11:35109576-35109374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 46
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr11:56675879-56676091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
153-371
               

               
Cow position:
               
chr11:77705720-77705925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr11:36136061-36136290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr11:69307475-69307712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr11:77750808-77750579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 12
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr11:53778578-53778807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
153-382
               

               
Cow position:
               
chr11:65607730-65607498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
40, 134
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr11:6202404-6202650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 42
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr11:38334485-38334716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
209, 45
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr11:1980307-1980075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 44
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr11:7013779-7013533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr11:7874100-7874334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr11:10095305-10095534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-387
               

               
Cow position:
               
chr11:36520836-36521070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
153-430
               

               
Cow position:
               
chr11:35923815-35924093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
154-306
               

               
Cow position:
               
chr11:70278149-70278000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
154-319
               

               
Cow position:
               
chr11:53717844-53717682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-341
               

               
Cow position:
               
chr11:67804712-67804891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 42
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr11:13043183-13042982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr11:26633051-26632847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
154-361
               

               
Cow position:
               
chr11:73354097-73353901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr11:38236214-38236436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr11:45619315-45619547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
155-289
               

               
Cow position:
               
chr11:18587632-18587500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
155-317
               

               
Cow position:
               
chr11:58938781-58938623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr11:46427444-46427222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
155-380
               

               
Cow position:
               
chr11:46245902-46245675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 45
               

               
Conread position:
               
155-386
               

               
Cow position:
               
chr11:58173589-58173824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
156-312
               

               
Cow position:
               
chr11:63917512-63917358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
156-355
               

               
Cow position:
               
chr11:41281003-41281206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr11:15382538-15382313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
129, 34
               

               
Conread position:
               
156-387
               

               
Cow position:
               
chr11:31413418-31413650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 112
               

               
Conread position:
               
156-409
               

               
Cow position:
               
chr11:26067219-26066975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
156-410
               

               
Cow position:
               
chr11:48672678-48672926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
157-359
               

               
Cow position:
               
chr11:62620342-62620540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr11:32260500-32260722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
157-387
               

               
Cow position:
               
chr11:49210860-49210626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr11:4225063-4225302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
239, 33
               

               
Conread position:
               
158-347
               

               
Cow position:
               
chr11:31410911-31410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
158-354
               

               
Cow position:
               
chr11:35562686-35562880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 32
               

               
Conread position:
               
158-361
               

               
Cow position:
               
chr11:70458007-70458210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
158-378
               

               
Cow position:
               
chr11:6395722-6395935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
158-383
               

               
Cow position:
               
chr11:3896732-3896510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
158-386
               

               
Cow position:
               
chr11:69417370-69417592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
158-389
               

               
Cow position:
               
chr11:66939626-66939393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
159-318
               

               
Cow position:
               
chr11:62168363-62168207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
160-312
               

               
Cow position:
               
chr11:5789931-5789781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
160-359
               

               
Cow position:
               
chr11:29308549-29308746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr11:21173465-21173271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
160-361
               

               
Cow position:
               
chr11:64408945-64409132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
160-378
               

               
Cow position:
               
chr11:31537471-31537266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
160-378
               

               
Cow position:
               
chr11:65495367-65495157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
202, 16
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr11:32710483-32710703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
160-382
               

               
Cow position:
               
chr11:63382222-63382010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
213, 39
               

               
Conread position:
               
160-384
               

               
Cow position:
               
chr11:18509062-18508839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 30
               

               
Conread position:
               
160-387
               

               
Cow position:
               
chr11:70304040-70304266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
161-331
               

               
Cow position:
               
chr11:2344220-2344388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
161-332
               

               
Cow position:
               
chr11:51687761-51687590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr11:28675046-28675241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr11:32595427-32595623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr11:63975099-63975297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-374
               

               
Cow position:
               
chr11:24599417-24599221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
161-379
               

               
Cow position:
               
chr11:21728306-21728101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
161-382
               

               
Cow position:
               
chr11:52132850-52132629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
161-383
               

               
Cow position:
               
chr11:9237877-9237659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr11:8437724-8437494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 24
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr11:34968644-34968423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr11:85571835-85571609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
161-401
               

               
Cow position:
               
chr11:52380902-52380664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
211, 29
               

               
Conread position:
               
161-404
               

               
Cow position:
               
chr11:6857700-6857936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 14
               

               
Conread position:
               
162-381
               

               
Cow position:
               
chr11:2484822-2484605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
162-387
               

               
Cow position:
               
chr11:55052842-55053059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
199, 28
               

               
Conread position:
               
162-399
               

               
Cow position:
               
chr11:73940595-73940359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
162-403
               

               
Cow position:
               
chr11:14649343-14649105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr11:48776346-48776097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
163-359
               

               
Cow position:
               
chr11:55399176-55398987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
163-398
               

               
Cow position:
               
chr11:30895031-30894800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
204, 5
               

               
Conread position:
               
163-409
               

               
Cow position:
               
chr11:43914263-43914505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 35
               

               
Conread position:
               
164-409
               

               
Cow position:
               
chr11:45350539-45350298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
165-377
               

               
Cow position:
               
chr11:63165673-63165465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
197, 37
               

               
Conread position:
               
167-374
               

               
Cow position:
               
chr11:19890818-19891014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr11:35238777-35238964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
168-359
               

               
Cow position:
               
chr11:35363458-35363661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
168-378
               

               
Cow position:
               
chr11:41215709-41215915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
168-378
               

               
Cow position:
               
chr11:79466188-79466409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
168-386
               

               
Cow position:
               
chr11:47784751-47784972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
168-387
               

               
Cow position:
               
chr11:4221295-4221510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
168-387
               

               
Cow position:
               
chr11:54428596-54428810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
168-420
               

               
Cow position:
               
chr11:1932515-1932266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
169-370
               

               
Cow position:
               
chr11:68660633-68660435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
169-375
               

               
Cow position:
               
chr11:25783690-25783894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
169-385
               

               
Cow position:
               
chr11:73984026-73983799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
169-388
               

               
Cow position:
               
chr11:81138189-81138404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
171-292
               

               
Cow position:
               
chr11:15683000-15682881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-359
               

               
Cow position:
               
chr11:28993758-28993584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-386
               

               
Cow position:
               
chr11:49207691-49207901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
171-388
               

               
Cow position:
               
chr11:10562988-10563199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
171-389
               

               
Cow position:
               
chr11:84775054-84775291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
171-408
               

               
Cow position:
               
chr11:17517378-17517617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
128, 28
               

               
Conread position:
               
171-431
               

               
Cow position:
               
chr11:46884353-46884611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
203, 25
               

               
Conread position:
               
172-388
               

               
Cow position:
               
chr11:31227943-31228150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
173-361
               

               
Cow position:
               
chr11:35149380-35149568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
173-387
               

               
Cow position:
               
chr11:66099881-66099667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
174-350
               

               
Cow position:
               
chr11:18792085-18791908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
174-404
               

               
Cow position:
               
chr11:12555323-12555096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
175-356
               

               
Cow position:
               
chr11:81041986-81041807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
175-358
               

               
Cow position:
               
chr11:5467061-5467244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 93
               

               
Conread position:
               
175-383
               

               
Cow position:
               
chr11:74427661-74427870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr11:25968867-25968663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr11:67538138-67537923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
175-389
               

               
Cow position:
               
chr11:9699261-9699063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
175-396
               

               
Cow position:
               
chr11:41576884-41576666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
186, 15
               

               
Conread position:
               
175-404
               

               
Cow position:
               
chr11:42084692-42084463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
175-409
               

               
Cow position:
               
chr11:18119485-18119716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
176-319
               

               
Cow position:
               
chr11:74720709-74720850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
176-351
               

               
Cow position:
               
chr11:35139892-35140066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
176-382
               

               
Cow position:
               
chr11:68326879-68326670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr11:37100184-37099984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr11:48315412-48315211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
191, 14
               

               
Conread position:
               
176-387
               

               
Cow position:
               
chr11:15366988-15366787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
176-396
               

               
Cow position:
               
chr11:19577926-19578139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
176-405
               

               
Cow position:
               
chr11:21830227-21830000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
176-409
               

               
Cow position:
               
chr11:87172092-87171867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
176-412
               

               
Cow position:
               
chr11:47314447-47314207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
177-341
               

               
Cow position:
               
chr11:41983181-41983012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
177-355
               

               
Cow position:
               
chr11:79707699-79707863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr11:12528289-12528097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr11:26535771-26535966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr11:86895362-86895554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
177-400
               

               
Cow position:
               
chr11:42016653-42016430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr11:36361661-36361435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 188
               

               
Conread position:
               
177-404
               

               
Cow position:
               
chr11:77017227-77017438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr11:20234669-20234852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
102, 92
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr11:49396539-49396340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
178-391
               

               
Cow position:
               
chr11:6580815-6581036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 81
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr11:58048318-58048537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
178-418
               

               
Cow position:
               
chr11:77758774-77758532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
184, 21
               

               
Conread position:
               
179-325
               

               
Cow position:
               
chr11:70639833-70639972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-378
               

               
Cow position:
               
chr11:25603935-25604135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
179-383
               

               
Cow position:
               
chr11:60296718-60296930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
179-394
               

               
Cow position:
               
chr11:5264080-5264296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 168
               

               
Conread position:
               
179-410
               

               
Cow position:
               
chr11:12079824-12080061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
180-425
               

               
Cow position:
               
chr11:6094414-6094180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
181-343
               

               
Cow position:
               
chr11:19549474-19549627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
181-361
               

               
Cow position:
               
chr11:41980215-41980038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
181-377
               

               
Cow position:
               
chr11:47110242-47110437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
181-383
               

               
Cow position:
               
chr11:42497832-42498033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
191, 44
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr11:64781077-64781278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
183-394
               

               
Cow position:
               
chr11:5176388-5176182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
184-409
               

               
Cow position:
               
chr11:38803-39031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
185-361
               

               
Cow position:
               
chr11:26343092-26343268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
186-381
               

               
Cow position:
               
chr11:38223796-38223604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
187-374
               

               
Cow position:
               
chr11:17074226-17074050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
189-308
               

               
Cow position:
               
chr11:59916141-59916262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
189-374
               

               
Cow position:
               
chr11:63484933-63485110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
189-387
               

               
Cow position:
               
chr11:19579021-19578824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
190-361
               

               
Cow position:
               
chr11:30322496-30322328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
190-378
               

               
Cow position:
               
chr11:40818630-40818446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
173, 103
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr11:77241702-77241895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
191-347
               

               
Cow position:
               
chr11:17807965-17807809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
191-361
               

               
Cow position:
               
chr11:83066485-83066658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
191-407
               

               
Cow position:
               
chr11:80296855-80296648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 109
               

               
Conread position:
               
192-312
               

               
Cow position:
               
chr11:16796223-16796344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
192-330
               

               
Cow position:
               
chr11:79869324-79869465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
192-359
               

               
Cow position:
               
chr11:66104397-66104229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr11:2835857-2836026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr11:60720457-60720288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr11:64023101-64022944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
192-361
               

               
Cow position:
               
chr11:76248048-76248212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
192-368
               

               
Cow position:
               
chr11:79666263-79666090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr11:29482437-29482254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 153
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr11:36300579-36300402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
192-380
               

               
Cow position:
               
chr11:63499128-63498945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
184, 21
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr11:57767189-57767379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
170, 23
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr11:30986640-30986824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
180, 21
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr11:20117072-20117265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr11:47411840-47412035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
169, 6
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr11:71455823-71456021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr11:81614515-81614321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 161
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr11:6320134-6319913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr11:9836457-9836289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr11:33373965-33374132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
193-361
               

               
Cow position:
               
chr11:84228718-84228557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
193-382
               

               
Cow position:
               
chr11:10066348-10066539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
193-383
               

               
Cow position:
               
chr11:80008068-80007874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
193-383
               

               
Cow position:
               
chr11:81066050-81065862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
193-384
               

               
Cow position:
               
chr11:58185882-58186065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
169, 95
               

               
Conread position:
               
193-386
               

               
Cow position:
               
chr11:79548938-79548743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 67
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr11:23220362-23220550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr11:36092917-36092728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
193-387
               

               
Cow position:
               
chr11:80370114-80370310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
169, 27
               

               
Conread position:
               
193-389
               

               
Cow position:
               
chr11:85186528-85186330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
160, 111
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr11:4436747-4436967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
194-390
               

               
Cow position:
               
chr11:42206422-42206616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
160, 107
               

               
Conread position:
               
194-403
               

               
Cow position:
               
chr11:7571625-7571826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
194-408
               

               
Cow position:
               
chr11:62456259-62456049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr11:80586275-80586488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
169, 97
               

               
Conread position:
               
194-417
               

               
Cow position:
               
chr11:38226243-38226465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
204, 66
               

               
Conread position:
               
195-342
               

               
Cow position:
               
chr11:61178359-61178499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
195-387
               

               
Cow position:
               
chr11:70600827-70600637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
195-389
               

               
Cow position:
               
chr11:44619956-44620151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
195-403
               

               
Cow position:
               
chr11:40538552-40538757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
195-423
               

               
Cow position:
               
chr11:41278187-41278423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr11:21124607-21124443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr11:30600188-30600024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
197-389
               

               
Cow position:
               
chr11:34778440-34778245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
197-404
               

               
Cow position:
               
chr11:4363908-4363705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
198-383
               

               
Cow position:
               
chr11:26442500-26442314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr11:74152750-74152558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
103, 169
               

               
Conread position:
               
199-404
               

               
Cow position:
               
chr11:35924066-35924270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
200-386
               

               
Cow position:
               
chr11:19148130-19147946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
161, 69
               

               
Conread position:
               
200-387
               

               
Cow position:
               
chr11:49486785-49486979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 172
               

               
Conread position:
               
201-383
               

               
Cow position:
               
chr11:62606424-62606607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
166, 162
               

               
Conread position:
               
202-361
               

               
Cow position:
               
chr11:17112332-17112165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
202-383
               

               
Cow position:
               
chr11:71814715-71814890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 96
               

               
Conread position:
               
204-386
               

               
Cow position:
               
chr11:68570370-68570190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
204-411
               

               
Cow position:
               
chr11:4411858-4411658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
205-403
               

               
Cow position:
               
chr11:7652055-7651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
206-348
               

               
Cow position:
               
chr11:55117457-55117599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-371
               

               
Cow position:
               
chr11:72401720-72401558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
156, 92
               

               
Conread position:
               
206-386
               

               
Cow position:
               
chr11:74839623-74839798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr11:26057638-26057457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 159
               

               
Conread position:
               
206-387
               

               
Cow position:
               
chr11:37041984-37042167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
207-386
               

               
Cow position:
               
chr11:35733070-35732894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
207-409
               

               
Cow position:
               
chr11:32800639-32800839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
208-379
               

               
Cow position:
               
chr11:54872745-54872573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
208-383
               

               
Cow position:
               
chr11:36847182-36847358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
209-394
               

               
Cow position:
               
chr11:81175611-81175802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
212-387
               

               
Cow position:
               
chr11:46010235-46010066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
158, 123
               

               
Conread position:
               
213-388
               

               
Cow position:
               
chr11:82733130-82732953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
149, 86
               

               
Conread position:
               
214-403
               

               
Cow position:
               
chr11:43641407-43641599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
149, 171
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr11:33369172-33369318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
215-361
               

               
Cow position:
               
chr11:46314032-46314179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
215-378
               

               
Cow position:
               
chr11:63695824-63695656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
215-382
               

               
Cow position:
               
chr11:63475651-63475485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
215-385
               

               
Cow position:
               
chr11:69421691-69421516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr11:18574834-18574664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr11:63849930-63849760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
215-387
               

               
Cow position:
               
chr11:76896353-76896183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
215-395
               

               
Cow position:
               
chr11:30857059-30857234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
215-406
               

               
Cow position:
               
chr11:37564895-37565085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
215-412
               

               
Cow position:
               
chr11:8422096-8421906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 78
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr11:11483334-11483533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr11:18777577-18777375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
216-417
               

               
Cow position:
               
chr11:44176618-44176814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
218-387
               

               
Cow position:
               
chr11:17369555-17369722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
144, 77
               

               
Conread position:
               
219-389
               

               
Cow position:
               
chr11:75915019-75915182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
144, 66
               

               
Conread position:
               
219-406
               

               
Cow position:
               
chr11:62102422-62102237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
220-354
               

               
Cow position:
               
chr11:62081941-62081813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr11:71191997-71192157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 94
               

               
Conread position:
               
220-387
               

               
Cow position:
               
chr11:15591448-15591284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
222-331
               

               
Cow position:
               
chr11:34279771-34279881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
222-383
               

               
Cow position:
               
chr11:44016272-44016434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
153, 141
               

               
Conread position:
               
222-389
               

               
Cow position:
               
chr11:44859258-44859097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
164, 81
               

               
Conread position:
               
222-389
               

               
Cow position:
               
chr11:51683244-51683412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 63
               

               
Conread position:
               
223-385
               

               
Cow position:
               
chr11:73637884-73638044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
224-378
               

               
Cow position:
               
chr11:1841994-1842139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
227-387
               

               
Cow position:
               
chr11:27413782-27413620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
64, 139
               

               
Conread position:
               
227-388
               

               
Cow position:
               
chr11:75388341-75388184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
228-361
               

               
Cow position:
               
chr11:2281290-2281157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-413
               

               
Cow position:
               
chr11:24551425-24551610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
229-378
               

               
Cow position:
               
chr11:86925925-86925777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
231-378
               

               
Cow position:
               
chr11:2830694-2830838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
232-387
               

               
Cow position:
               
chr11:38657145-38656990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 131
               

               
Conread position:
               
239-389
               

               
Cow position:
               
chr11:63977103-63977253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
240-384
               

               
Cow position:
               
chr11:57873854-57874001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
247-389
               

               
Cow position:
               
chr11:68592071-68592211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
257-386
               

               
Cow position:
               
chr11:46592727-46592856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
269-388
               

               
Cow position:
               
chr11:30111680-30111804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
275-386
               

               
Cow position:
               
chr11:63196372-63196484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 96
               
Show alignments to all cow chromosomes.