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Cow genome map

           
Conread name:
           
rche35_a23.y1
        

               
Conread position:
               
72-356
               

               
Cow position:
               
chr12:4866674-4866953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 128
               

               
Conread position:
               
116-407
               

               
Cow position:
               
chr12:29675235-29674952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
118-333
               

               
Cow position:
               
chr12:7299555-7299345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
120-312
               

               
Cow position:
               
chr12:3880070-3879880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
121-334
               

               
Cow position:
               
chr12:7457637-7457424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
124-414
               

               
Cow position:
               
chr12:30919337-30919629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
125-294
               

               
Cow position:
               
chr12:15699988-15700160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
126-275
               

               
Cow position:
               
chr12:10491186-10491332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
126-278
               

               
Cow position:
               
chr12:8868961-8868818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr12:5680596-5680761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr12:22881970-22882132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
126-292
               

               
Cow position:
               
chr12:42233972-42234137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
126-311
               

               
Cow position:
               
chr12:41474003-41474188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr12:18523479-18523671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr12:5609595-5609395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr12:31517257-31517035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
126-376
               

               
Cow position:
               
chr12:5714544-5714781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
237, 67
               

               
Conread position:
               
126-387
               

               
Cow position:
               
chr12:19258195-19258445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr12:38126611-38126335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
126-409
               

               
Cow position:
               
chr12:40910375-40910097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
127-310
               

               
Cow position:
               
chr12:27622124-27621938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:42879611-42879843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
165, 16
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr12:48415598-48415376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
127-394
               

               
Cow position:
               
chr12:29899512-29899241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
127-411
               

               
Cow position:
               
chr12:1889662-1889387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
278, 40
               

               
Conread position:
               
128-303
               

               
Cow position:
               
chr12:4793113-4793286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
137, 69
               

               
Conread position:
               
129-289
               

               
Cow position:
               
chr12:31429651-31429496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 60
               

               
Conread position:
               
129-361
               

               
Cow position:
               
chr12:15122241-15122469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
129-402
               

               
Cow position:
               
chr12:20777004-20776739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
233, 60
               

               
Conread position:
               
130-264
               

               
Cow position:
               
chr12:25452528-25452397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-308
               

               
Cow position:
               
chr12:27037532-27037356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
130-323
               

               
Cow position:
               
chr12:9914708-9914900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
166, 23
               

               
Conread position:
               
130-353
               

               
Cow position:
               
chr12:24211331-24211549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
162, 63
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr12:11525677-11525449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr12:3623613-3623835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr12:18514011-18513782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
130-376
               

               
Cow position:
               
chr12:6687810-6688048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
130-378
               

               
Cow position:
               
chr12:37008784-37008545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
232, 23
               

               
Conread position:
               
130-380
               

               
Cow position:
               
chr12:28789963-28790219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr12:9143305-9143558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
130-385
               

               
Cow position:
               
chr12:17881780-17882021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
130-387
               

               
Cow position:
               
chr12:36012696-36012437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr12:5554417-5554166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr12:15429678-15429420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
164, 74
               

               
Conread position:
               
130-406
               

               
Cow position:
               
chr12:12531157-12530889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 23
               

               
Conread position:
               
130-414
               

               
Cow position:
               
chr12:15358252-15358543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr12:45090429-45090269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr12:13988287-13988556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
132-361
               

               
Cow position:
               
chr12:45363280-45363506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr12:44733172-44733008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr12:1773743-1773562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
133-346
               

               
Cow position:
               
chr12:11056795-11057000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr12:20636232-20636019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr12:42631120-42630893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
133-361
               

               
Cow position:
               
chr12:9514282-9514512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
133-374
               

               
Cow position:
               
chr12:26575815-26576048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
133-374
               

               
Cow position:
               
chr12:33948822-33949056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr12:18518594-18518840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
229, 57
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr12:25561291-25561532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
240, 57
               

               
Conread position:
               
133-383
               

               
Cow position:
               
chr12:42602321-42602070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr12:7884761-7884513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:7539867-7539615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:11659849-11660097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:16670188-16670439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:24663035-24663289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:25917350-25917110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr12:46714292-46714549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
133-393
               

               
Cow position:
               
chr12:27176555-27176815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
133-394
               

               
Cow position:
               
chr12:42162968-42163225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr12:38216112-38215841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 137
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr12:41159511-41159778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 65
               

               
Conread position:
               
133-415
               

               
Cow position:
               
chr12:38852110-38851820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
134-293
               

               
Cow position:
               
chr12:25188108-25188267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr12:6210235-6210074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr12:15173746-15173906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
134-312
               

               
Cow position:
               
chr12:29969501-29969679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 54
               

               
Conread position:
               
134-346
               

               
Cow position:
               
chr12:33323573-33323365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
134-361
               

               
Cow position:
               
chr12:8759244-8759476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr12:36544720-36544479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
224, 24
               

               
Conread position:
               
134-380
               

               
Cow position:
               
chr12:17269723-17269964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
134-383
               

               
Cow position:
               
chr12:17031539-17031774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
134-388
               

               
Cow position:
               
chr12:19261117-19261365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
228, 61
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr12:5135153-5135403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr12:30590689-30590939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
134-394
               

               
Cow position:
               
chr12:30805776-30806032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
134-408
               

               
Cow position:
               
chr12:43560225-43559954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
134-413
               

               
Cow position:
               
chr12:18103689-18103424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chr12:25192972-25193243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
237, 62
               

               
Conread position:
               
135-361
               

               
Cow position:
               
chr12:22515807-22515594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
135-377
               

               
Cow position:
               
chr12:13643154-13643394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
135-383
               

               
Cow position:
               
chr12:4768848-4769084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
135-385
               

               
Cow position:
               
chr12:35780001-35779754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
135-386
               

               
Cow position:
               
chr12:11546958-11547211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr12:31948039-31948281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
95, 18
               

               
Conread position:
               
135-387
               

               
Cow position:
               
chr12:35310760-35310514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
135-396
               

               
Cow position:
               
chr12:17879377-17879124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
238, 23
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr12:10895629-10895369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
260, 18
               

               
Conread position:
               
135-413
               

               
Cow position:
               
chr12:38774317-38774049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
250, 19
               

               
Conread position:
               
136-294
               

               
Cow position:
               
chr12:30438162-30438317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
136-343
               

               
Cow position:
               
chr12:3371930-3371734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
136-361
               

               
Cow position:
               
chr12:17270453-17270681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr12:36790886-36790645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
231, 23
               

               
Conread position:
               
136-387
               

               
Cow position:
               
chr12:25027843-25027587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
136-393
               

               
Cow position:
               
chr12:27192446-27192189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr12:7902880-7902628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
137-320
               

               
Cow position:
               
chr12:7977965-7978142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
137-403
               

               
Cow position:
               
chr12:6242254-6241990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
144, 62
               

               
Conread position:
               
137-408
               

               
Cow position:
               
chr12:44602425-44602697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
137-415
               

               
Cow position:
               
chr12:22285198-22284924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
138-378
               

               
Cow position:
               
chr12:29057314-29057550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
138-385
               

               
Cow position:
               
chr12:15703570-15703328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr12:28213437-28213592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
139-297
               

               
Cow position:
               
chr12:30753646-30753802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
139-360
               

               
Cow position:
               
chr12:5635526-5635309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-371
               

               
Cow position:
               
chr12:13911654-13911423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr12:46120907-46120651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
139-382
               

               
Cow position:
               
chr12:42285898-42286129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
234, 14
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr12:14222909-14223157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
147, 29
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr12:17252271-17252034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
139-404
               

               
Cow position:
               
chr12:42181205-42180942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
140-296
               

               
Cow position:
               
chr12:4162435-4162273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 50
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr12:27563447-27563235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr12:31532472-31532265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
140-361
               

               
Cow position:
               
chr12:33851289-33851500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
140-383
               

               
Cow position:
               
chr12:44622283-44622526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
140-386
               

               
Cow position:
               
chr12:12300843-12301100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr12:15938334-15938096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 13
               

               
Conread position:
               
140-427
               

               
Cow position:
               
chr12:24032425-24032701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
214, 18
               

               
Conread position:
               
140-431
               

               
Cow position:
               
chr12:25343710-25343997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
272, 13
               

               
Conread position:
               
141-291
               

               
Cow position:
               
chr12:33729724-33729569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
141-305
               

               
Cow position:
               
chr12:39663272-39663108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
141-346
               

               
Cow position:
               
chr12:30662020-30661820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-385
               

               
Cow position:
               
chr12:35771091-35770858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
141-386
               

               
Cow position:
               
chr12:12637253-12637018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr12:23836260-23836507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
141-387
               

               
Cow position:
               
chr12:34333039-34333284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
96, 55
               

               
Conread position:
               
141-389
               

               
Cow position:
               
chr12:32051441-32051692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
141-390
               

               
Cow position:
               
chr12:34466075-34465846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
141-402
               

               
Cow position:
               
chr12:31269082-31269345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr12:15495827-15496087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
142-249
               

               
Cow position:
               
chr12:39675566-39675462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
142-313
               

               
Cow position:
               
chr12:36994185-36994017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr12:7657410-7657192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr12:15414937-15414729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
142-361
               

               
Cow position:
               
chr12:20316602-20316384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
142-386
               

               
Cow position:
               
chr12:8943293-8943046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
142-386
               

               
Cow position:
               
chr12:34007235-34007467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr12:6206264-6206502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr12:23916776-23917007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
142-387
               

               
Cow position:
               
chr12:34029197-34028957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
142-389
               

               
Cow position:
               
chr12:46333279-46333518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
142-409
               

               
Cow position:
               
chr12:42749370-42749632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
143-307
               

               
Cow position:
               
chr12:4797232-4797394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 10
               

               
Conread position:
               
143-359
               

               
Cow position:
               
chr12:45069456-45069242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr12:40200632-40200840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
143-374
               

               
Cow position:
               
chr12:40158091-40157872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
143-378
               

               
Cow position:
               
chr12:45168088-45167848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
146, 56
               

               
Conread position:
               
143-382
               

               
Cow position:
               
chr12:7960650-7960418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
143-401
               

               
Cow position:
               
chr12:10942219-10942483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr12:6754128-6754383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
144-280
               

               
Cow position:
               
chr12:22540139-22540273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-288
               

               
Cow position:
               
chr12:4135010-4135151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-297
               

               
Cow position:
               
chr12:3197200-3197351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
144-331
               

               
Cow position:
               
chr12:36041827-36041641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
144-355
               

               
Cow position:
               
chr12:16359796-16360004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-359
               

               
Cow position:
               
chr12:19400882-19400674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
159, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:23446656-23446860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 10
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:30946675-30946890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:31228505-31228727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:36501015-36500803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
79, 9
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:41216998-41217212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
144-361
               

               
Cow position:
               
chr12:42160625-42160413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
144-362
               

               
Cow position:
               
chr12:23574696-23574915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
144-371
               

               
Cow position:
               
chr12:37993800-37993568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
144-373
               

               
Cow position:
               
chr12:24181082-24181298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-375
               

               
Cow position:
               
chr12:4341811-4341573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
155, 9
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr12:27894839-27894601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
218, 54
               

               
Conread position:
               
144-383
               

               
Cow position:
               
chr12:18123602-18123832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
229, 14
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr12:4719880-4720112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr12:26750021-26749775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr12:43788958-43789194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
144-405
               

               
Cow position:
               
chr12:9065488-9065751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr12:12165583-12165844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
129, 51
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr12:35368575-35368834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
145-286
               

               
Cow position:
               
chr12:23855773-23855904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
145-297
               

               
Cow position:
               
chr12:44517805-44517655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-329
               

               
Cow position:
               
chr12:32753446-32753631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
145-360
               

               
Cow position:
               
chr12:42953968-42953754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr12:36118898-36119112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
145-381
               

               
Cow position:
               
chr12:4596396-4596641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
145-383
               

               
Cow position:
               
chr12:6241253-6241494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
145-383
               

               
Cow position:
               
chr12:25280570-25280339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
145-385
               

               
Cow position:
               
chr12:22291552-22291320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
227, 8
               

               
Conread position:
               
145-387
               

               
Cow position:
               
chr12:42966934-42967167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
221, 8
               

               
Conread position:
               
145-396
               

               
Cow position:
               
chr12:6188180-6187926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
143, 8
               

               
Conread position:
               
145-410
               

               
Cow position:
               
chr12:9129843-9130103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
118, 8
               

               
Conread position:
               
145-411
               

               
Cow position:
               
chr12:21780096-21780356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
146-253
               

               
Cow position:
               
chr12:25530010-25530115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
146-324
               

               
Cow position:
               
chr12:24222587-24222412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
146-373
               

               
Cow position:
               
chr12:45002132-45001915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
221, 7
               

               
Conread position:
               
146-374
               

               
Cow position:
               
chr12:31883275-31883507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 7
               

               
Conread position:
               
146-377
               

               
Cow position:
               
chr12:24152270-24152501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
117, 142
               

               
Conread position:
               
146-387
               

               
Cow position:
               
chr12:1701871-1701644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
227, 53
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr12:18563099-18563306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr12:48578775-48579001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
149-297
               

               
Cow position:
               
chr12:29779977-29779831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
149-351
               

               
Cow position:
               
chr12:35123827-35124025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
149-378
               

               
Cow position:
               
chr12:9482370-9482142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
149-382
               

               
Cow position:
               
chr12:19866176-19866409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
149-386
               

               
Cow position:
               
chr12:33976135-33976370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
149-387
               

               
Cow position:
               
chr12:7110134-7110378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 48
               

               
Conread position:
               
149-388
               

               
Cow position:
               
chr12:20479394-20479170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
149-397
               

               
Cow position:
               
chr12:42282902-42282652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
150-286
               

               
Cow position:
               
chr12:5940278-5940413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-294
               

               
Cow position:
               
chr12:18943720-18943578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-297
               

               
Cow position:
               
chr12:23798039-23798182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr12:44693153-44693306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
150-312
               

               
Cow position:
               
chr12:7000665-7000507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
150-319
               

               
Cow position:
               
chr12:41581052-41581216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 49
               

               
Conread position:
               
150-352
               

               
Cow position:
               
chr12:42254606-42254804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr12:11587712-11587911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-359
               

               
Cow position:
               
chr12:15389009-15389212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr12:26217887-26217683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr12:25809367-25809586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr12:10834186-10833978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
217, 29
               

               
Conread position:
               
150-379
               

               
Cow position:
               
chr12:15050678-15050463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
150-380
               

               
Cow position:
               
chr12:6410797-6410573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr12:29966045-29966273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr12:38155133-38154900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr12:40881972-40881748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
212, 49
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr12:43783037-43782796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
150-402
               

               
Cow position:
               
chr12:37255958-37256207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
149, 39
               

               
Conread position:
               
150-403
               

               
Cow position:
               
chr12:39746344-39746594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
206, 46
               

               
Conread position:
               
150-409
               

               
Cow position:
               
chr12:42924175-42923920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-425
               

               
Cow position:
               
chr12:34161352-34161618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
176, 37
               

               
Conread position:
               
151-297
               

               
Cow position:
               
chr12:9439512-9439369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
152-429
               

               
Cow position:
               
chr12:2734967-2734699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
247, 8
               

               
Conread position:
               
153-278
               

               
Cow position:
               
chr12:29995521-29995400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
153-289
               

               
Cow position:
               
chr12:7311321-7311456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
153-291
               

               
Cow position:
               
chr12:2711439-2711575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
153-292
               

               
Cow position:
               
chr12:9229559-9229422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-294
               

               
Cow position:
               
chr12:22894112-22894249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr12:45014620-45014779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
153-314
               

               
Cow position:
               
chr12:8859117-8859278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 47
               

               
Conread position:
               
153-361
               

               
Cow position:
               
chr12:24023861-24023667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr12:4954766-4954981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr12:3675586-3675342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
136, 46
               

               
Conread position:
               
153-384
               

               
Cow position:
               
chr12:21393648-21393877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr12:30210424-30210645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
209, 46
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr12:23939164-23939390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr12:16056917-16056680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr12:11836175-11836419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
205, 45
               

               
Conread position:
               
154-297
               

               
Cow position:
               
chr12:3950403-3950263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-297
               

               
Cow position:
               
chr12:17774736-17774877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
154-307
               

               
Cow position:
               
chr12:44595868-44595717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
154-377
               

               
Cow position:
               
chr12:47267367-47267144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 38
               

               
Conread position:
               
154-383
               

               
Cow position:
               
chr12:35241163-35240938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr12:10827727-10827954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
154-387
               

               
Cow position:
               
chr12:27803108-27802885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
209, 44
               

               
Conread position:
               
154-404
               

               
Cow position:
               
chr12:31067499-31067251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
199, 42
               

               
Conread position:
               
154-410
               

               
Cow position:
               
chr12:3454621-3454888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 206
               

               
Conread position:
               
154-417
               

               
Cow position:
               
chr12:23764436-23764700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
155-276
               

               
Cow position:
               
chr12:43691473-43691354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
155-289
               

               
Cow position:
               
chr12:18766030-18765898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
155-297
               

               
Cow position:
               
chr12:12912994-12912854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
155-297
               

               
Cow position:
               
chr12:34195764-34195627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
155-360
               

               
Cow position:
               
chr12:8153128-8153332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr12:25814090-25814301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
155-400
               

               
Cow position:
               
chr12:27385433-27385668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
156-315
               

               
Cow position:
               
chr12:7920186-7920341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
156-361
               

               
Cow position:
               
chr12:44829185-44829387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr12:28699843-28699620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
156-383
               

               
Cow position:
               
chr12:15103211-15103443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 209
               

               
Conread position:
               
157-291
               

               
Cow position:
               
chr12:19691286-19691157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
157-361
               

               
Cow position:
               
chr12:45092391-45092584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
185, 33
               

               
Conread position:
               
157-374
               

               
Cow position:
               
chr12:32169486-32169702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
144, 39
               

               
Conread position:
               
157-382
               

               
Cow position:
               
chr12:14986695-14986912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
216, 11
               

               
Conread position:
               
157-389
               

               
Cow position:
               
chr12:24166999-24166778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
157-402
               

               
Cow position:
               
chr12:22485757-22485999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr12:43974238-43974483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
231, 39
               

               
Conread position:
               
158-382
               

               
Cow position:
               
chr12:4193773-4194003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
158-389
               

               
Cow position:
               
chr12:26357423-26357196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
160-383
               

               
Cow position:
               
chr12:41218729-41218500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
160-386
               

               
Cow position:
               
chr12:1952856-1952637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
161-317
               

               
Cow position:
               
chr12:11109703-11109857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
161-327
               

               
Cow position:
               
chr12:25355805-25355643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
161-358
               

               
Cow position:
               
chr12:12619100-12619295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr12:5459198-5459394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr12:33625457-33625261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-359
               

               
Cow position:
               
chr12:46122612-46122807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr12:1998852-1998654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr12:19508610-19508420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr12:24116413-24116229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
161-361
               

               
Cow position:
               
chr12:31925801-31925999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr12:36261638-36261854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr12:20404097-20404333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
201, 35
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr12:33495182-33495423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
200, 35
               

               
Conread position:
               
161-407
               

               
Cow position:
               
chr12:8523410-8523165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
161-412
               

               
Cow position:
               
chr12:41801876-41802131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
162-312
               

               
Cow position:
               
chr12:25444864-25445015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
162-361
               

               
Cow position:
               
chr12:12532541-12532347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr12:29895357-29895554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
163-387
               

               
Cow position:
               
chr12:35469496-35469282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
164-387
               

               
Cow position:
               
chr12:12166499-12166274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
198, 12
               

               
Conread position:
               
165-361
               

               
Cow position:
               
chr12:26147217-26147024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
165-371
               

               
Cow position:
               
chr12:24437682-24437479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
165-379
               

               
Cow position:
               
chr12:22859420-22859616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
165-387
               

               
Cow position:
               
chr12:26868860-26868641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
165-413
               

               
Cow position:
               
chr12:43854847-43855085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
237, 34
               

               
Conread position:
               
165-428
               

               
Cow position:
               
chr12:19007978-19007724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
166-359
               

               
Cow position:
               
chr12:10950449-10950258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
167-319
               

               
Cow position:
               
chr12:6226189-6226042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
167-361
               

               
Cow position:
               
chr12:26356756-26356564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
168-293
               

               
Cow position:
               
chr12:25441596-25441720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
168-303
               

               
Cow position:
               
chr12:5543837-5543707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
168-389
               

               
Cow position:
               
chr12:3586074-3586284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
168-406
               

               
Cow position:
               
chr12:23105893-23106127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
170-312
               

               
Cow position:
               
chr12:27572282-27572142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
170-361
               

               
Cow position:
               
chr12:44542221-44542407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
170-412
               

               
Cow position:
               
chr12:25989249-25989024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
171-296
               

               
Cow position:
               
chr12:42143119-42143241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
171-348
               

               
Cow position:
               
chr12:21389830-21390005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
171-384
               

               
Cow position:
               
chr12:33129211-33129420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
171-387
               

               
Cow position:
               
chr12:25823268-25823054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
171-389
               

               
Cow position:
               
chr12:29200437-29200207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
128, 178
               

               
Conread position:
               
171-404
               

               
Cow position:
               
chr12:22752581-22752816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
5, 197
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr12:41221049-41220869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
172-378
               

               
Cow position:
               
chr12:46144011-46144218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 80
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr12:41989731-41989516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
172-389
               

               
Cow position:
               
chr12:36111837-36111617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 84
               

               
Conread position:
               
172-411
               

               
Cow position:
               
chr12:24146591-24146836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr12:20654518-20654309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
165, 109
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr12:29944986-29944764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
174-399
               

               
Cow position:
               
chr12:44022382-44022604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
175-386
               

               
Cow position:
               
chr12:25456371-25456591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
175-387
               

               
Cow position:
               
chr12:39150089-39149874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
175-403
               

               
Cow position:
               
chr12:43619241-43619471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 174
               

               
Conread position:
               
175-411
               

               
Cow position:
               
chr12:43551259-43551018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
176-350
               

               
Cow position:
               
chr12:18996774-18996944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr12:37480871-37480677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
177-378
               

               
Cow position:
               
chr12:17108122-17108319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
186, 48
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr12:20356841-20356636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
201, 22
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr12:34533109-34532903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
177-387
               

               
Cow position:
               
chr12:45303859-45304057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
177-388
               

               
Cow position:
               
chr12:19697359-19697569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
177-389
               

               
Cow position:
               
chr12:30476467-30476688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr12:14987761-14987976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
178-425
               

               
Cow position:
               
chr12:17250481-17250708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr12:31841536-31841714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-383
               

               
Cow position:
               
chr12:2964017-2964212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
179-383
               

               
Cow position:
               
chr12:29180640-29180840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
192, 122
               

               
Conread position:
               
179-385
               

               
Cow position:
               
chr12:24397196-24396998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-387
               

               
Cow position:
               
chr12:22323310-22323099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 189
               

               
Conread position:
               
179-387
               

               
Cow position:
               
chr12:37123616-37123820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
179-420
               

               
Cow position:
               
chr12:16386490-16386252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
230, 20
               

               
Conread position:
               
180-360
               

               
Cow position:
               
chr12:42944102-42944280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 16
               

               
Conread position:
               
181-387
               

               
Cow position:
               
chr12:6915190-6915398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 89
               

               
Conread position:
               
181-387
               

               
Cow position:
               
chr12:18938837-18939043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
181-411
               

               
Cow position:
               
chr12:43474729-43474948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
182-340
               

               
Cow position:
               
chr12:11230203-11230361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
182-361
               

               
Cow position:
               
chr12:22288095-22288271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
182-387
               

               
Cow position:
               
chr12:35136889-35137089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
185-387
               

               
Cow position:
               
chr12:44013626-44013421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
188-387
               

               
Cow position:
               
chr12:6480613-6480813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 98
               

               
Conread position:
               
190-383
               

               
Cow position:
               
chr12:25528584-25528396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
183, 105
               

               
Conread position:
               
190-389
               

               
Cow position:
               
chr12:8143831-8143641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
182, 22
               

               
Conread position:
               
191-378
               

               
Cow position:
               
chr12:46064839-46065025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
191-409
               

               
Cow position:
               
chr12:38679026-38679240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 105
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr12:4512472-4512291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
170, 109
               

               
Conread position:
               
192-378
               

               
Cow position:
               
chr12:29731292-29731471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-379
               

               
Cow position:
               
chr12:3057065-3057250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
192-384
               

               
Cow position:
               
chr12:1203043-1203227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr12:20355193-20355390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
93, 176
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr12:28131567-28131768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
192-406
               

               
Cow position:
               
chr12:14360628-14360831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr12:11272848-11272633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
218, 79
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr12:31237983-31237762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr12:9866786-9866558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
170, 205
               

               
Conread position:
               
193-378
               

               
Cow position:
               
chr12:22047903-22048084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr12:43582981-43583161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
169, 61
               

               
Conread position:
               
193-388
               

               
Cow position:
               
chr12:3579466-3579655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 17
               

               
Conread position:
               
193-389
               

               
Cow position:
               
chr12:34877809-34878012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr12:30937036-30936844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr12:38343529-38343729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
193-400
               

               
Cow position:
               
chr12:4182308-4182105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
194-359
               

               
Cow position:
               
chr12:35663943-35664099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
194-387
               

               
Cow position:
               
chr12:23714655-23714842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 109
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr12:27430486-27430705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
194-409
               

               
Cow position:
               
chr12:6958199-6958411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
194-409
               

               
Cow position:
               
chr12:12699661-12699447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
195-369
               

               
Cow position:
               
chr12:38552175-38552345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
172, 106
               

               
Conread position:
               
195-387
               

               
Cow position:
               
chr12:31602841-31602649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
195-387
               

               
Cow position:
               
chr12:43427821-43427624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
196-387
               

               
Cow position:
               
chr12:42951706-42951523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr12:29195277-29195476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
196-402
               

               
Cow position:
               
chr12:45782208-45782405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
196-408
               

               
Cow position:
               
chr12:38691939-38691724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
162, 192
               

               
Conread position:
               
197-351
               

               
Cow position:
               
chr12:11106598-11106444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-361
               

               
Cow position:
               
chr12:18130500-18130655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
197-409
               

               
Cow position:
               
chr12:39339694-39339910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
166, 112
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr12:30042709-30042896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr12:43351919-43352081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
199-380
               

               
Cow position:
               
chr12:28598248-28598438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
202-385
               

               
Cow position:
               
chr12:583522-583337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 164
               

               
Conread position:
               
203-383
               

               
Cow position:
               
chr12:1089404-1089223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
203-387
               

               
Cow position:
               
chr12:14396796-14396619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
169, 96
               

               
Conread position:
               
208-389
               

               
Cow position:
               
chr12:42561896-42562069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
159, 5
               

               
Conread position:
               
213-390
               

               
Cow position:
               
chr12:41684506-41684684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
150, 86
               

               
Conread position:
               
215-347
               

               
Cow position:
               
chr12:38822677-38822802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
215-415
               

               
Cow position:
               
chr12:46106791-46106992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
215-416
               

               
Cow position:
               
chr12:38032139-38031937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chr12:41420862-41420692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 149
               

               
Conread position:
               
219-362
               

               
Cow position:
               
chr12:17744859-17744719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
220-361
               

               
Cow position:
               
chr12:44861254-44861113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-406
               

               
Cow position:
               
chr12:2835410-2835593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
222-402
               

               
Cow position:
               
chr12:26945827-26945655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
170, 79
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr12:27663985-27663823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
5, 141
               

               
Conread position:
               
223-407
               

               
Cow position:
               
chr12:13995789-13995603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
225-361
               

               
Cow position:
               
chr12:12179072-12179207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
227-378
               

               
Cow position:
               
chr12:44892220-44892374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
136, 44
               

               
Conread position:
               
229-382
               

               
Cow position:
               
chr12:10456152-10456312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr12:19056688-19056869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 88
               

               
Conread position:
               
233-409
               

               
Cow position:
               
chr12:38165522-38165349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
247-378
               

               
Cow position:
               
chr12:29289818-29289947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
247-417
               

               
Cow position:
               
chr12:6719420-6719589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
248-377
               

               
Cow position:
               
chr12:27421487-27421616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
255-387
               

               
Cow position:
               
chr12:7049860-7049990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
269-402
               

               
Cow position:
               
chr12:19664269-19664137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 95
               
Show alignments to all cow chromosomes.